EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000008439 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 16006 bases
Position: chr17:9432635-9448640
Accession: 13071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000008656	zf-C2H2	PF00096.26	1.5e-28	1	5
ENSMGAP00000008656	zf-C2H2	PF00096.26	1.5e-28	2	5
ENSMGAP00000008656	zf-C2H2	PF00096.26	1.5e-28	3	5
ENSMGAP00000008656	zf-C2H2	PF00096.26	1.5e-28	4	5
ENSMGAP00000008656	zf-C2H2	PF00096.26	1.5e-28	5	5
ENSMGAP00000008656	zf-met	PF12874.7	3.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000009456	PATZ1-201	1677	-	ENSMGAP00000008656	558 (aa)	-	G1N8K8

Gene Model

Click here to download ENSMGAG00000008439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000008439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000008439	PATZ1	72	35.928	ENSMGAG00000010294	MYNN	68	35.928
ENSMGAG00000008439	PATZ1	70	37.615	ENSMGAG00000015827	ZBTB14	75	38.532
ENSMGAG00000008439	PATZ1	72	34.513	ENSMGAG00000003137	GZF1	99	34.513
ENSMGAG00000008439	PATZ1	63	33.766	ENSMGAG00000013362	-	99	33.766
ENSMGAG00000008439	PATZ1	65	31.349	ENSMGAG00000010710	PRDM5	72	31.349
ENSMGAG00000008439	PATZ1	67	36.190	ENSMGAG00000016603	-	87	36.190
ENSMGAG00000008439	PATZ1	68	32.099	ENSMGAG00000010352	ZNF521	54	32.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000008439	PATZ1	100	87.521	ENSG00000100105	PATZ1	85	87.692	Homo_sapiens
ENSMGAG00000008439	PATZ1	100	50.804	ENSAPOG00000018447	patz1	90	56.184	Acanthochromis_polyacanthus
ENSMGAG00000008439	PATZ1	100	87.179	ENSAMEG00000007074	PATZ1	85	88.205	Ailuropoda_melanoleuca
ENSMGAG00000008439	PATZ1	100	54.333	ENSACIG00000016779	patz1	88	54.333	Amphilophus_citrinellus
ENSMGAG00000008439	PATZ1	100	55.229	ENSAPEG00000013354	patz1	88	55.229	Amphiprion_percula
ENSMGAG00000008439	PATZ1	100	55.241	ENSATEG00000011260	patz1	88	55.241	Anabas_testudineus
ENSMGAG00000008439	PATZ1	99	95.312	ENSAPLG00000003934	PATZ1	99	95.312	Anas_platyrhynchos
ENSMGAG00000008439	PATZ1	100	87.521	ENSANAG00000029603	PATZ1	85	87.692	Aotus_nancymaae
ENSMGAG00000008439	PATZ1	99	57.809	ENSAMXG00000002273	patz1	88	49.381	Astyanax_mexicanus
ENSMGAG00000008439	PATZ1	100	87.009	ENSBTAG00000005478	PATZ1	85	88.034	Bos_taurus
ENSMGAG00000008439	PATZ1	100	87.521	ENSCJAG00000010978	PATZ1	85	87.692	Callithrix_jacchus
ENSMGAG00000008439	PATZ1	100	87.179	ENSCAFG00000013087	PATZ1	85	88.205	Canis_familiaris
ENSMGAG00000008439	PATZ1	100	86.667	ENSCHIG00000020203	PATZ1	85	87.692	Capra_hircus
ENSMGAG00000008439	PATZ1	100	87.521	ENSTSYG00000033183	PATZ1	85	87.692	Carlito_syrichta
ENSMGAG00000008439	PATZ1	100	87.521	ENSCCAG00000028772	PATZ1	85	87.692	Cebus_capucinus
ENSMGAG00000008439	PATZ1	100	87.692	ENSCATG00000006101	PATZ1	85	87.863	Cercocebus_atys
ENSMGAG00000008439	PATZ1	100	93.448	ENSCPBG00000011277	PATZ1	85	93.448	Chrysemys_picta_bellii
ENSMGAG00000008439	PATZ1	100	87.692	ENSCANG00000024972	PATZ1	85	87.863	Colobus_angolensis_palliatus
ENSMGAG00000008439	PATZ1	100	85.470	ENSCGRG00001004071	Patz1	85	85.641	Cricetulus_griseus_chok1gshd
ENSMGAG00000008439	PATZ1	100	87.179	ENSCGRG00000004814	Patz1	91	87.350	Cricetulus_griseus_crigri
ENSMGAG00000008439	PATZ1	100	55.444	ENSCSEG00000001385	patz1	88	55.041	Cynoglossus_semilaevis
ENSMGAG00000008439	PATZ1	100	54.441	ENSCVAG00000007684	patz1	88	54.770	Cyprinodon_variegatus
ENSMGAG00000008439	PATZ1	99	51.907	ENSDARG00000076584	patz1	87	51.907	Danio_rerio
ENSMGAG00000008439	PATZ1	88	85.493	ENSDNOG00000003183	PATZ1	83	86.654	Dasypus_novemcinctus
ENSMGAG00000008439	PATZ1	100	87.009	ENSDORG00000023834	Patz1	85	88.034	Dipodomys_ordii
ENSMGAG00000008439	PATZ1	100	87.863	ENSECAG00000025030	PATZ1	85	88.034	Equus_caballus
ENSMGAG00000008439	PATZ1	100	55.809	ENSELUG00000002333	patz1	90	55.809	Esox_lucius
ENSMGAG00000008439	PATZ1	100	87.179	ENSFCAG00000030253	PATZ1	85	88.205	Felis_catus
ENSMGAG00000008439	PATZ1	100	94.310	ENSFALG00000007450	PATZ1	99	94.310	Ficedula_albicollis
ENSMGAG00000008439	PATZ1	100	82.594	ENSFDAG00000005614	PATZ1	88	83.788	Fukomys_damarensis
ENSMGAG00000008439	PATZ1	100	54.146	ENSFHEG00000014755	patz1	88	54.146	Fundulus_heteroclitus
ENSMGAG00000008439	PATZ1	98	51.870	ENSGMOG00000001062	patz1	87	52.033	Gadus_morhua
ENSMGAG00000008439	PATZ1	100	96.034	ENSGALG00000006934	PATZ1	84	96.034	Gallus_gallus
ENSMGAG00000008439	PATZ1	100	51.208	ENSGAFG00000010053	patz1	88	50.725	Gambusia_affinis
ENSMGAG00000008439	PATZ1	99	93.253	ENSGAGG00000003214	PATZ1	100	93.253	Gopherus_agassizii
ENSMGAG00000008439	PATZ1	100	87.692	ENSGGOG00000017171	PATZ1	85	87.863	Gorilla_gorilla
ENSMGAG00000008439	PATZ1	100	50.163	ENSHCOG00000017644	patz1	89	49.559	Hippocampus_comes
ENSMGAG00000008439	PATZ1	99	50.244	ENSIPUG00000017653	patz1	87	50.244	Ictalurus_punctatus
ENSMGAG00000008439	PATZ1	100	86.838	ENSSTOG00000020707	PATZ1	85	87.863	Ictidomys_tridecemlineatus
ENSMGAG00000008439	PATZ1	100	86.007	ENSJJAG00000015259	Patz1	85	86.177	Jaculus_jaculus
ENSMGAG00000008439	PATZ1	100	53.512	ENSKMAG00000008157	patz1	88	52.796	Kryptolebias_marmoratus
ENSMGAG00000008439	PATZ1	100	87.009	ENSLAFG00000002317	PATZ1	87	88.034	Loxodonta_africana
ENSMGAG00000008439	PATZ1	100	87.692	ENSMFAG00000040968	PATZ1	85	87.863	Macaca_fascicularis
ENSMGAG00000008439	PATZ1	100	87.692	ENSMNEG00000037588	PATZ1	85	87.863	Macaca_nemestrina
ENSMGAG00000008439	PATZ1	100	87.692	ENSMLEG00000030938	PATZ1	85	87.863	Mandrillus_leucophaeus
ENSMGAG00000008439	PATZ1	100	53.956	ENSMAMG00000023652	patz1	89	53.956	Mastacembelus_armatus
ENSMGAG00000008439	PATZ1	100	87.350	ENSMAUG00000004129	Patz1	85	87.521	Mesocricetus_auratus
ENSMGAG00000008439	PATZ1	100	87.863	ENSMICG00000005430	PATZ1	85	88.034	Microcebus_murinus
ENSMGAG00000008439	PATZ1	100	87.350	ENSMOCG00000014488	Patz1	85	87.521	Microtus_ochrogaster
ENSMGAG00000008439	PATZ1	76	58.257	ENSMMOG00000021679	patz1	57	58.257	Mola_mola
ENSMGAG00000008439	PATZ1	100	53.923	ENSMALG00000021172	patz1	88	53.923	Monopterus_albus
ENSMGAG00000008439	PATZ1	100	87.009	MGP_CAROLIEiJ_G0016007	Patz1	85	87.179	Mus_caroli
ENSMGAG00000008439	PATZ1	100	87.179	ENSMUSG00000020453	Patz1	85	87.350	Mus_musculus
ENSMGAG00000008439	PATZ1	100	87.179	MGP_PahariEiJ_G0016884	Patz1	85	87.350	Mus_pahari
ENSMGAG00000008439	PATZ1	100	87.179	MGP_SPRETEiJ_G0016846	Patz1	85	87.350	Mus_spretus
ENSMGAG00000008439	PATZ1	100	87.009	ENSMLUG00000009942	PATZ1	85	88.034	Myotis_lucifugus
ENSMGAG00000008439	PATZ1	100	87.521	ENSNGAG00000010268	Patz1	85	87.692	Nannospalax_galili
ENSMGAG00000008439	PATZ1	100	55.574	ENSNBRG00000016032	patz1	88	55.574	Neolamprologus_brichardi
ENSMGAG00000008439	PATZ1	83	92.473	ENSMEUG00000016293	PATZ1	100	92.473	Notamacropus_eugenii
ENSMGAG00000008439	PATZ1	100	87.521	ENSODEG00000003589	PATZ1	85	87.521	Octodon_degus
ENSMGAG00000008439	PATZ1	100	51.282	ENSONIG00000004248	patz1	88	51.282	Oreochromis_niloticus
ENSMGAG00000008439	PATZ1	100	88.567	ENSOANG00000014654	PATZ1	86	88.737	Ornithorhynchus_anatinus
ENSMGAG00000008439	PATZ1	100	52.194	ENSORLG00020010937	patz1	89	52.194	Oryzias_latipes_hni
ENSMGAG00000008439	PATZ1	100	52.119	ENSORLG00015007396	patz1	89	52.119	Oryzias_latipes_hsok
ENSMGAG00000008439	PATZ1	100	50.565	ENSOMEG00000006636	patz1	88	50.565	Oryzias_melastigma
ENSMGAG00000008439	PATZ1	100	87.863	ENSOGAG00000027905	PATZ1	85	88.034	Otolemur_garnettii
ENSMGAG00000008439	PATZ1	100	87.692	ENSPPAG00000033227	PATZ1	85	87.863	Pan_paniscus
ENSMGAG00000008439	PATZ1	100	87.179	ENSPPRG00000001573	PATZ1	85	88.205	Panthera_pardus
ENSMGAG00000008439	PATZ1	100	87.179	ENSPTIG00000007937	PATZ1	89	88.205	Panthera_tigris_altaica
ENSMGAG00000008439	PATZ1	100	87.692	ENSPTRG00000014268	PATZ1	85	87.863	Pan_troglodytes
ENSMGAG00000008439	PATZ1	100	87.692	ENSPANG00000006821	PATZ1	85	87.863	Papio_anubis
ENSMGAG00000008439	PATZ1	100	59.344	ENSPKIG00000019584	patz1	90	57.906	Paramormyrops_kingsleyae
ENSMGAG00000008439	PATZ1	73	87.715	ENSPSIG00000016553	-	91	87.715	Pelodiscus_sinensis
ENSMGAG00000008439	PATZ1	71	97.727	ENSPSIG00000011562	-	100	97.727	Pelodiscus_sinensis
ENSMGAG00000008439	PATZ1	100	54.050	ENSPMGG00000010196	patz1	88	54.050	Periophthalmus_magnuspinnatus
ENSMGAG00000008439	PATZ1	100	87.350	ENSPEMG00000005321	Patz1	85	87.350	Peromyscus_maniculatus_bairdii
ENSMGAG00000008439	PATZ1	99	54.590	ENSPLAG00000010425	patz1	100	54.187	Poecilia_latipinna
ENSMGAG00000008439	PATZ1	100	51.286	ENSPMEG00000000255	patz1	88	50.886	Poecilia_mexicana
ENSMGAG00000008439	PATZ1	100	54.414	ENSPREG00000002440	patz1	88	54.019	Poecilia_reticulata
ENSMGAG00000008439	PATZ1	100	87.521	ENSPPYG00000011732	PATZ1	85	87.692	Pongo_abelii
ENSMGAG00000008439	PATZ1	100	87.692	ENSPCOG00000019729	PATZ1	85	87.863	Propithecus_coquereli
ENSMGAG00000008439	PATZ1	100	87.179	ENSPVAG00000001749	PATZ1	85	88.205	Pteropus_vampyrus
ENSMGAG00000008439	PATZ1	100	56.373	ENSPNYG00000013542	patz1	88	56.373	Pundamilia_nyererei
ENSMGAG00000008439	PATZ1	99	54.739	ENSPNAG00000017222	patz1	99	54.739	Pygocentrus_nattereri
ENSMGAG00000008439	PATZ1	100	87.692	ENSRBIG00000044231	PATZ1	85	87.863	Rhinopithecus_bieti
ENSMGAG00000008439	PATZ1	100	87.692	ENSRROG00000037155	PATZ1	85	87.863	Rhinopithecus_roxellana
ENSMGAG00000008439	PATZ1	100	87.521	ENSSBOG00000003894	PATZ1	85	87.692	Saimiri_boliviensis_boliviensis
ENSMGAG00000008439	PATZ1	68	78.947	ENSSFOG00015013244	patz1	67	57.794	Scleropages_formosus
ENSMGAG00000008439	PATZ1	100	91.938	ENSSPUG00000015298	PATZ1	83	91.938	Sphenodon_punctatus
ENSMGAG00000008439	PATZ1	99	86.621	ENSSSCG00000010027	PATZ1	100	87.650	Sus_scrofa
ENSMGAG00000008439	PATZ1	100	54.386	ENSTRUG00000015366	patz1	88	54.386	Takifugu_rubripes
ENSMGAG00000008439	PATZ1	100	87.179	ENSTTRG00000010279	PATZ1	85	88.205	Tursiops_truncatus
ENSMGAG00000008439	PATZ1	100	79.829	ENSUAMG00000015014	PATZ1	84	80.855	Ursus_americanus
ENSMGAG00000008439	PATZ1	100	71.575	ENSXETG00000004190	patz1	88	71.575	Xenopus_tropicalis
ENSMGAG00000008439	PATZ1	100	51.369	ENSXMAG00000015531	patz1	88	50.886	Xiphophorus_maculatus