EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000008606 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 75692 bases
Position: chr16:11396627-11472318
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000008834	Fox-1_C	PF12414.8	1.6e-14	1	1
ENSMGAP00000008834	RRM_1	PF00076.22	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000009640	RBFOX1-201	873	-	ENSMGAP00000008834	291 (aa)	-	G1N8Z5

Gene Model

Click here to download ENSMGAG00000008606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000008606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000008606	RBFOX1	53	35.366	ENSMGAG00000005408	PABPC4	56	35.526
ENSMGAG00000008606	RBFOX1	87	70.039	ENSMGAG00000005600	RBFOX3	96	70.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000008606	RBFOX1	96	88.571	ENSG00000078328	RBFOX1	100	93.651	Homo_sapiens
ENSMGAG00000008606	RBFOX1	98	70.066	ENSAPOG00000003197	rbfox1	72	70.550	Acanthochromis_polyacanthus
ENSMGAG00000008606	RBFOX1	78	91.150	ENSAMEG00000008605	RBFOX1	90	91.150	Ailuropoda_melanoleuca
ENSMGAG00000008606	RBFOX1	98	69.408	ENSAOCG00000008283	rbfox1	97	69.903	Amphiprion_ocellaris
ENSMGAG00000008606	RBFOX1	92	67.159	ENSAPEG00000010636	rbfox1	75	67.033	Amphiprion_percula
ENSMGAG00000008606	RBFOX1	98	68.627	ENSATEG00000007513	rbfox1	97	68.810	Anabas_testudineus
ENSMGAG00000008606	RBFOX1	96	92.086	ENSAPLG00000013263	RBFOX1	71	92.226	Anas_platyrhynchos
ENSMGAG00000008606	RBFOX1	95	84.946	ENSACAG00000004013	RBFOX1	71	85.211	Anolis_carolinensis
ENSMGAG00000008606	RBFOX1	98	88.811	ENSANAG00000029527	RBFOX1	81	87.241	Aotus_nancymaae
ENSMGAG00000008606	RBFOX1	75	90.411	ENSAMXG00000002431	rbfox1	64	90.411	Astyanax_mexicanus
ENSMGAG00000008606	RBFOX1	98	88.462	ENSBTAG00000007210	RBFOX1	77	88.660	Bos_taurus
ENSMGAG00000008606	RBFOX1	96	87.857	ENSCJAG00000017351	RBFOX1	72	88.809	Callithrix_jacchus
ENSMGAG00000008606	RBFOX1	96	88.929	ENSCAFG00000019082	RBFOX1	72	89.123	Canis_familiaris
ENSMGAG00000008606	RBFOX1	93	88.603	ENSCAFG00020024881	RBFOX1	76	88.603	Canis_lupus_dingo
ENSMGAG00000008606	RBFOX1	98	88.811	ENSCHIG00000023549	RBFOX1	77	89.003	Capra_hircus
ENSMGAG00000008606	RBFOX1	95	89.091	ENSTSYG00000005334	RBFOX1	75	89.286	Carlito_syrichta
ENSMGAG00000008606	RBFOX1	96	87.143	ENSCAPG00000017669	RBFOX1	72	88.214	Cavia_aperea
ENSMGAG00000008606	RBFOX1	96	87.143	ENSCPOG00000011314	RBFOX1	72	87.324	Cavia_porcellus
ENSMGAG00000008606	RBFOX1	96	88.214	ENSCCAG00000023031	RBFOX1	68	88.421	Cebus_capucinus
ENSMGAG00000008606	RBFOX1	98	87.368	ENSCATG00000033816	RBFOX1	81	87.586	Cercocebus_atys
ENSMGAG00000008606	RBFOX1	98	86.713	ENSCLAG00000012761	RBFOX1	77	86.942	Chinchilla_lanigera
ENSMGAG00000008606	RBFOX1	98	89.161	ENSCSAG00000008739	RBFOX1	77	89.347	Chlorocebus_sabaeus
ENSMGAG00000008606	RBFOX1	83	80.913	ENSCHOG00000012843	RBFOX1	58	80.913	Choloepus_hoffmanni
ENSMGAG00000008606	RBFOX1	98	91.608	ENSCPBG00000026626	RBFOX1	84	91.753	Chrysemys_picta_bellii
ENSMGAG00000008606	RBFOX1	96	88.571	ENSCANG00000033125	RBFOX1	68	88.772	Colobus_angolensis_palliatus
ENSMGAG00000008606	RBFOX1	96	87.410	ENSCGRG00001013729	Rbfox1	71	87.900	Cricetulus_griseus_chok1gshd
ENSMGAG00000008606	RBFOX1	96	87.410	ENSCGRG00000003272	Rbfox1	71	87.900	Cricetulus_griseus_crigri
ENSMGAG00000008606	RBFOX1	91	66.197	ENSCSEG00000008840	rbfox1	71	66.782	Cynoglossus_semilaevis
ENSMGAG00000008606	RBFOX1	98	78.746	ENSDARG00000014746	rbfox1	100	87.805	Danio_rerio
ENSMGAG00000008606	RBFOX1	95	89.493	ENSDNOG00000043612	RBFOX1	68	89.680	Dasypus_novemcinctus
ENSMGAG00000008606	RBFOX1	95	86.022	ENSDORG00000010024	Rbfox1	74	85.017	Dipodomys_ordii
ENSMGAG00000008606	RBFOX1	96	67.500	ENSETEG00000003771	RBFOX1	68	68.070	Echinops_telfairi
ENSMGAG00000008606	RBFOX1	98	89.161	ENSEASG00005011599	RBFOX1	73	89.347	Equus_asinus_asinus
ENSMGAG00000008606	RBFOX1	98	88.811	ENSECAG00000012667	RBFOX1	77	89.003	Equus_caballus
ENSMGAG00000008606	RBFOX1	73	71.084	ENSELUG00000013096	rbfox1	65	71.084	Esox_lucius
ENSMGAG00000008606	RBFOX1	98	89.161	ENSFCAG00000025322	RBFOX1	77	89.347	Felis_catus
ENSMGAG00000008606	RBFOX1	95	92.029	ENSFALG00000004027	RBFOX1	84	92.171	Ficedula_albicollis
ENSMGAG00000008606	RBFOX1	96	87.857	ENSFDAG00000007388	RBFOX1	71	88.612	Fukomys_damarensis
ENSMGAG00000008606	RBFOX1	97	91.815	ENSGALG00000034325	RBFOX1	75	91.958	Gallus_gallus
ENSMGAG00000008606	RBFOX1	98	90.909	ENSGAGG00000023681	RBFOX1	77	91.065	Gopherus_agassizii
ENSMGAG00000008606	RBFOX1	96	88.571	ENSGGOG00000016871	-	78	88.380	Gorilla_gorilla
ENSMGAG00000008606	RBFOX1	98	87.063	ENSHGLG00000016944	RBFOX1	77	87.285	Heterocephalus_glaber_female
ENSMGAG00000008606	RBFOX1	98	87.063	ENSHGLG00100003272	RBFOX1	77	87.285	Heterocephalus_glaber_male
ENSMGAG00000008606	RBFOX1	91	70.438	ENSHCOG00000016419	rbfox1	73	70.968	Hippocampus_comes
ENSMGAG00000008606	RBFOX1	98	79.720	ENSIPUG00000015215	rbfox1	78	80.069	Ictalurus_punctatus
ENSMGAG00000008606	RBFOX1	98	87.413	ENSSTOG00000000322	RBFOX1	77	87.629	Ictidomys_tridecemlineatus
ENSMGAG00000008606	RBFOX1	96	83.929	ENSJJAG00000002575	Rbfox1	70	84.698	Jaculus_jaculus
ENSMGAG00000008606	RBFOX1	96	72.222	ENSLBEG00000014659	rbfox1	74	72.222	Labrus_bergylta
ENSMGAG00000008606	RBFOX1	95	87.097	ENSLOCG00000006675	rbfox1	71	87.324	Lepisosteus_oculatus
ENSMGAG00000008606	RBFOX1	67	88.660	ENSLAFG00000011480	RBFOX1	65	88.945	Loxodonta_africana
ENSMGAG00000008606	RBFOX1	98	87.719	ENSMFAG00000036447	RBFOX1	78	87.931	Macaca_fascicularis
ENSMGAG00000008606	RBFOX1	96	89.964	ENSMMUG00000003458	RBFOX1	77	90.141	Macaca_mulatta
ENSMGAG00000008606	RBFOX1	98	89.510	ENSMNEG00000032034	RBFOX1	71	89.123	Macaca_nemestrina
ENSMGAG00000008606	RBFOX1	96	88.571	ENSMLEG00000015382	RBFOX1	68	88.772	Mandrillus_leucophaeus
ENSMGAG00000008606	RBFOX1	98	68.212	ENSMAMG00000003142	rbfox1	97	69.055	Mastacembelus_armatus
ENSMGAG00000008606	RBFOX1	90	55.894	ENSMAUG00000020570	Rbfox1	69	55.094	Mesocricetus_auratus
ENSMGAG00000008606	RBFOX1	98	88.462	ENSMICG00000034286	RBFOX1	77	88.660	Microcebus_murinus
ENSMGAG00000008606	RBFOX1	96	87.410	ENSMOCG00000020932	Rbfox1	72	88.043	Microtus_ochrogaster
ENSMGAG00000008606	RBFOX1	92	74.908	ENSMMOG00000009716	rbfox1	71	74.908	Mola_mola
ENSMGAG00000008606	RBFOX1	91	90.530	ENSMODG00000005826	RBFOX1	76	90.706	Monodelphis_domestica
ENSMGAG00000008606	RBFOX1	97	71.864	ENSMALG00000003337	rbfox1	70	71.672	Monopterus_albus
ENSMGAG00000008606	RBFOX1	98	87.063	MGP_CAROLIEiJ_G0020427	Rbfox1	71	88.256	Mus_caroli
ENSMGAG00000008606	RBFOX1	97	87.900	ENSMUSG00000008658	Rbfox1	97	87.900	Mus_musculus
ENSMGAG00000008606	RBFOX1	98	86.713	MGP_PahariEiJ_G0016135	Rbfox1	71	88.256	Mus_pahari
ENSMGAG00000008606	RBFOX1	98	86.364	MGP_SPRETEiJ_G0021321	Rbfox1	71	87.544	Mus_spretus
ENSMGAG00000008606	RBFOX1	96	88.929	ENSMPUG00000014822	RBFOX1	72	89.123	Mustela_putorius_furo
ENSMGAG00000008606	RBFOX1	67	88.144	ENSMLUG00000015896	RBFOX1	65	88.442	Myotis_lucifugus
ENSMGAG00000008606	RBFOX1	96	89.209	ENSNGAG00000023276	Rbfox1	72	90.000	Nannospalax_galili
ENSMGAG00000008606	RBFOX1	97	58.784	ENSNBRG00000011084	rbfox1	67	58.784	Neolamprologus_brichardi
ENSMGAG00000008606	RBFOX1	96	88.214	ENSNLEG00000010017	-	68	88.421	Nomascus_leucogenys
ENSMGAG00000008606	RBFOX1	84	90.164	ENSMEUG00000012525	RBFOX1	58	90.164	Notamacropus_eugenii
ENSMGAG00000008606	RBFOX1	84	88.066	ENSOPRG00000006199	-	58	88.066	Ochotona_princeps
ENSMGAG00000008606	RBFOX1	96	86.786	ENSODEG00000013166	RBFOX1	71	87.544	Octodon_degus
ENSMGAG00000008606	RBFOX1	98	90.210	ENSOANG00000002379	RBFOX1	77	90.378	Ornithorhynchus_anatinus
ENSMGAG00000008606	RBFOX1	75	94.009	ENSOCUG00000001205	-	96	94.009	Oryctolagus_cuniculus
ENSMGAG00000008606	RBFOX1	96	87.279	ENSOGAG00000025535	RBFOX1	73	87.500	Otolemur_garnettii
ENSMGAG00000008606	RBFOX1	82	77.824	ENSOARG00000005135	RBFOX1	95	77.824	Ovis_aries
ENSMGAG00000008606	RBFOX1	95	89.455	ENSPPAG00000036238	-	77	89.643	Pan_paniscus
ENSMGAG00000008606	RBFOX1	96	88.571	ENSPPRG00000006546	RBFOX1	68	88.772	Panthera_pardus
ENSMGAG00000008606	RBFOX1	82	88.235	ENSPTIG00000021154	RBFOX1	66	88.235	Panthera_tigris_altaica
ENSMGAG00000008606	RBFOX1	96	88.571	ENSPTRG00000007744	RBFOX1	75	88.380	Pan_troglodytes
ENSMGAG00000008606	RBFOX1	98	87.368	ENSPANG00000026500	RBFOX1	81	87.586	Papio_anubis
ENSMGAG00000008606	RBFOX1	95	82.310	ENSPKIG00000009667	-	75	82.517	Paramormyrops_kingsleyae
ENSMGAG00000008606	RBFOX1	98	84.615	ENSPKIG00000019353	rbfox1	85	84.880	Paramormyrops_kingsleyae
ENSMGAG00000008606	RBFOX1	98	91.958	ENSPSIG00000006523	RBFOX1	73	92.096	Pelodiscus_sinensis
ENSMGAG00000008606	RBFOX1	96	87.770	ENSPEMG00000017607	Rbfox1	71	88.256	Peromyscus_maniculatus_bairdii
ENSMGAG00000008606	RBFOX1	61	89.266	ENSPCIG00000026887	RBFOX1	64	89.560	Phascolarctos_cinereus
ENSMGAG00000008606	RBFOX1	96	88.571	ENSPPYG00000007079	-	72	88.772	Pongo_abelii
ENSMGAG00000008606	RBFOX1	96	78.571	ENSPCAG00000002630	RBFOX1	75	78.947	Procavia_capensis
ENSMGAG00000008606	RBFOX1	96	87.857	ENSPCOG00000025687	RBFOX1	77	88.129	Propithecus_coquereli
ENSMGAG00000008606	RBFOX1	96	85.714	ENSPVAG00000013467	RBFOX1	68	85.965	Pteropus_vampyrus
ENSMGAG00000008606	RBFOX1	91	77.385	ENSPNAG00000023109	rbfox1	71	77.778	Pygocentrus_nattereri
ENSMGAG00000008606	RBFOX1	98	86.713	ENSRNOG00000002827	Rbfox1	77	86.942	Rattus_norvegicus
ENSMGAG00000008606	RBFOX1	98	89.161	ENSRBIG00000044478	RBFOX1	77	89.347	Rhinopithecus_bieti
ENSMGAG00000008606	RBFOX1	96	88.571	ENSRROG00000044411	RBFOX1	84	88.772	Rhinopithecus_roxellana
ENSMGAG00000008606	RBFOX1	98	88.811	ENSSBOG00000033726	RBFOX1	75	88.028	Saimiri_boliviensis_boliviensis
ENSMGAG00000008606	RBFOX1	95	89.493	ENSSHAG00000009257	RBFOX1	74	87.732	Sarcophilus_harrisii
ENSMGAG00000008606	RBFOX1	89	83.525	ENSSFOG00015023675	rbfox1	76	83.525	Scleropages_formosus
ENSMGAG00000008606	RBFOX1	96	70.383	ENSSFOG00015009955	-	67	70.890	Scleropages_formosus
ENSMGAG00000008606	RBFOX1	98	69.967	ENSSMAG00000015505	rbfox1	77	70.455	Scophthalmus_maximus
ENSMGAG00000008606	RBFOX1	98	73.264	ENSSDUG00000016413	rbfox1	74	73.264	Seriola_dumerili
ENSMGAG00000008606	RBFOX1	96	71.284	ENSSLDG00000009353	rbfox1	86	71.572	Seriola_lalandi_dorsalis
ENSMGAG00000008606	RBFOX1	92	87.500	ENSSPUG00000009732	RBFOX1	69	87.500	Sphenodon_punctatus
ENSMGAG00000008606	RBFOX1	96	73.852	ENSSPAG00000009723	rbfox1	72	74.552	Stegastes_partitus
ENSMGAG00000008606	RBFOX1	96	87.857	ENSSSCG00000007917	RBFOX1	76	89.219	Sus_scrofa
ENSMGAG00000008606	RBFOX1	95	92.029	ENSTGUG00000004562	RBFOX1	72	92.171	Taeniopygia_guttata
ENSMGAG00000008606	RBFOX1	96	70.169	ENSTRUG00000020940	rbfox1	76	70.234	Takifugu_rubripes
ENSMGAG00000008606	RBFOX1	67	62.051	ENSTNIG00000002567	rbfox1	55	62.500	Tetraodon_nigroviridis
ENSMGAG00000008606	RBFOX1	96	87.857	ENSTTRG00000005700	RBFOX1	68	88.070	Tursiops_truncatus
ENSMGAG00000008606	RBFOX1	96	88.929	ENSUAMG00000024633	RBFOX1	75	89.123	Ursus_americanus
ENSMGAG00000008606	RBFOX1	84	89.300	ENSUMAG00000003579	RBFOX1	67	89.300	Ursus_maritimus
ENSMGAG00000008606	RBFOX1	98	89.161	ENSVVUG00000017311	RBFOX1	77	89.347	Vulpes_vulpes