EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000008696 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 2621 bases
Position: chr22:11565776-11568396
Accession: 100548671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000008953	LSM	PF01423.22	4.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000009765	SNRPN-201	864	XM_019622101	ENSMGAP00000008953	240 (aa)	XP_019477646	G1N981

Gene Model

Click here to download ENSMGAG00000008696's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000008696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000008696	SNRPN	92	85.909	ENSG00000128739	SNRPN	99	89.222	Homo_sapiens
ENSMGAG00000008696	SNRPN	92	85.068	ENSAMEG00000007034	SNRPN	90	85.455	Ailuropoda_melanoleuca
ENSMGAG00000008696	SNRPN	92	85.909	ENSANAG00000034241	SNRPN	92	85.909	Aotus_nancymaae
ENSMGAG00000008696	SNRPN	89	89.720	ENSBTAG00000008251	SNRPN	93	89.806	Bos_taurus
ENSMGAG00000008696	SNRPN	95	85.463	ENSCJAG00000042622	-	92	85.455	Callithrix_jacchus
ENSMGAG00000008696	SNRPN	92	85.909	ENSCJAG00000003759	-	92	85.909	Callithrix_jacchus
ENSMGAG00000008696	SNRPN	92	85.455	ENSCAFG00000010127	SNRPN	92	85.455	Canis_familiaris
ENSMGAG00000008696	SNRPN	89	90.187	ENSCAFG00020024075	SNRPN	92	85.455	Canis_lupus_dingo
ENSMGAG00000008696	SNRPN	95	85.088	ENSCHIG00000017477	SNRPN	96	85.000	Capra_hircus
ENSMGAG00000008696	SNRPN	92	85.909	ENSTSYG00000005248	SNRPN	92	85.909	Carlito_syrichta
ENSMGAG00000008696	SNRPN	92	85.909	ENSCAPG00000003047	SNRPN	92	85.909	Cavia_aperea
ENSMGAG00000008696	SNRPN	92	85.909	ENSCPOG00000020270	SNRPN	92	85.909	Cavia_porcellus
ENSMGAG00000008696	SNRPN	92	85.909	ENSCCAG00000024231	SNRPN	92	85.909	Cebus_capucinus
ENSMGAG00000008696	SNRPN	92	85.909	ENSCATG00000032518	SNRPN	92	85.909	Cercocebus_atys
ENSMGAG00000008696	SNRPN	92	85.909	ENSCLAG00000011376	SNRPN	92	85.909	Chinchilla_lanigera
ENSMGAG00000008696	SNRPN	92	85.909	ENSCSAG00000006406	SNRPN	92	85.909	Chlorocebus_sabaeus
ENSMGAG00000008696	SNRPN	92	85.909	ENSCANG00000041156	SNRPN	92	85.909	Colobus_angolensis_palliatus
ENSMGAG00000008696	SNRPN	92	85.455	ENSCGRG00001004136	Snrpn	92	85.455	Cricetulus_griseus_chok1gshd
ENSMGAG00000008696	SNRPN	92	85.455	ENSCGRG00000001621	Snrpn	92	85.455	Cricetulus_griseus_crigri
ENSMGAG00000008696	SNRPN	72	85.465	ENSCVAG00000014193	SNRPN	61	89.796	Cyprinodon_variegatus
ENSMGAG00000008696	SNRPN	92	85.068	ENSDNOG00000037060	SNRPN	90	85.455	Dasypus_novemcinctus
ENSMGAG00000008696	SNRPN	92	85.909	ENSDORG00000004527	Snrpn	92	85.909	Dipodomys_ordii
ENSMGAG00000008696	SNRPN	92	85.455	ENSEASG00005017871	SNRPN	92	85.455	Equus_asinus_asinus
ENSMGAG00000008696	SNRPN	92	85.455	ENSECAG00000018148	SNRPN	92	85.455	Equus_caballus
ENSMGAG00000008696	SNRPN	92	85.455	ENSEEUG00000007440	-	92	85.455	Erinaceus_europaeus
ENSMGAG00000008696	SNRPN	95	85.526	ENSFCAG00000022298	-	92	85.455	Felis_catus
ENSMGAG00000008696	SNRPN	76	79.235	ENSFDAG00000010528	-	68	87.050	Fukomys_damarensis
ENSMGAG00000008696	SNRPN	92	85.909	ENSFDAG00000016578	-	92	85.909	Fukomys_damarensis
ENSMGAG00000008696	SNRPN	92	85.909	ENSGGOG00000003988	SNRPN	92	85.909	Gorilla_gorilla
ENSMGAG00000008696	SNRPN	88	66.667	ENSGGOG00000024469	-	66	80.303	Gorilla_gorilla
ENSMGAG00000008696	SNRPN	88	78.774	ENSHGLG00000019812	-	69	83.234	Heterocephalus_glaber_female
ENSMGAG00000008696	SNRPN	71	75.439	ENSHGLG00000020936	-	71	74.850	Heterocephalus_glaber_female
ENSMGAG00000008696	SNRPN	98	74.153	ENSHGLG00000002327	-	91	72.273	Heterocephalus_glaber_female
ENSMGAG00000008696	SNRPN	92	85.909	ENSHGLG00000011924	SNRPN	92	85.909	Heterocephalus_glaber_female
ENSMGAG00000008696	SNRPN	92	85.909	ENSHGLG00100016559	SNRPN	92	85.909	Heterocephalus_glaber_male
ENSMGAG00000008696	SNRPN	98	72.881	ENSHGLG00100004881	-	91	69.545	Heterocephalus_glaber_male
ENSMGAG00000008696	SNRPN	88	78.774	ENSHGLG00100021056	-	69	83.234	Heterocephalus_glaber_male
ENSMGAG00000008696	SNRPN	92	85.909	ENSSTOG00000001339	SNRPN	92	85.909	Ictidomys_tridecemlineatus
ENSMGAG00000008696	SNRPN	92	85.520	ENSLAFG00000009458	SNRPN	92	85.909	Loxodonta_africana
ENSMGAG00000008696	SNRPN	95	85.965	ENSMFAG00000042235	SNRPN	92	85.909	Macaca_fascicularis
ENSMGAG00000008696	SNRPN	95	85.965	ENSMMUG00000023139	SNURF	92	85.909	Macaca_mulatta
ENSMGAG00000008696	SNRPN	92	85.909	ENSMNEG00000031291	SNRPN	92	85.909	Macaca_nemestrina
ENSMGAG00000008696	SNRPN	92	85.909	ENSMLEG00000038837	SNRPN	92	85.909	Mandrillus_leucophaeus
ENSMGAG00000008696	SNRPN	95	85.965	ENSMAUG00000000051	Snrpn	96	85.909	Mesocricetus_auratus
ENSMGAG00000008696	SNRPN	92	85.909	ENSMICG00000042356	SNRPN	92	85.909	Microcebus_murinus
ENSMGAG00000008696	SNRPN	92	85.909	ENSMOCG00000015350	Snrpn	88	90.777	Microtus_ochrogaster
ENSMGAG00000008696	SNRPN	92	90.909	ENSMODG00000013926	-	92	90.909	Monodelphis_domestica
ENSMGAG00000008696	SNRPN	92	85.909	MGP_CAROLIEiJ_G0029815	Snrpn	92	85.909	Mus_caroli
ENSMGAG00000008696	SNRPN	92	85.909	ENSMUSG00000102252	Snrpn	92	85.909	Mus_musculus
ENSMGAG00000008696	SNRPN	92	85.909	MGP_PahariEiJ_G0013040	Snrpn	92	85.909	Mus_pahari
ENSMGAG00000008696	SNRPN	92	85.909	MGP_SPRETEiJ_G0030918	Snrpn	92	85.909	Mus_spretus
ENSMGAG00000008696	SNRPN	92	85.455	ENSMPUG00000014638	-	92	85.455	Mustela_putorius_furo
ENSMGAG00000008696	SNRPN	83	50.754	ENSMPUG00000007115	-	61	70.769	Mustela_putorius_furo
ENSMGAG00000008696	SNRPN	84	54.589	ENSMLUG00000025849	-	56	65.574	Myotis_lucifugus
ENSMGAG00000008696	SNRPN	58	68.841	ENSMLUG00000024428	-	62	67.407	Myotis_lucifugus
ENSMGAG00000008696	SNRPN	92	85.068	ENSMLUG00000023361	-	90	85.455	Myotis_lucifugus
ENSMGAG00000008696	SNRPN	92	85.909	ENSNGAG00000000181	Snrpn	92	85.909	Nannospalax_galili
ENSMGAG00000008696	SNRPN	92	69.091	ENSNLEG00000001376	SNRPN	91	69.091	Nomascus_leucogenys
ENSMGAG00000008696	SNRPN	99	83.613	ENSODEG00000019708	-	92	86.301	Octodon_degus
ENSMGAG00000008696	SNRPN	92	85.909	ENSODEG00000013478	-	92	85.909	Octodon_degus
ENSMGAG00000008696	SNRPN	92	85.455	ENSODEG00000020110	-	92	85.455	Octodon_degus
ENSMGAG00000008696	SNRPN	94	76.444	ENSODEG00000016065	-	68	89.474	Octodon_degus
ENSMGAG00000008696	SNRPN	88	84.977	ENSOCUG00000003532	-	69	89.222	Oryctolagus_cuniculus
ENSMGAG00000008696	SNRPN	73	86.932	ENSORLG00020007490	SNRPN	69	89.222	Oryzias_latipes_hni
ENSMGAG00000008696	SNRPN	73	86.932	ENSORLG00015003332	SNRPN	69	89.222	Oryzias_latipes_hsok
ENSMGAG00000008696	SNRPN	73	86.932	ENSOMEG00000002066	SNRPN	69	89.222	Oryzias_melastigma
ENSMGAG00000008696	SNRPN	92	85.909	ENSOGAG00000007392	SNRPN	92	85.909	Otolemur_garnettii
ENSMGAG00000008696	SNRPN	92	85.000	ENSOARG00000009080	SNRPN	92	85.000	Ovis_aries
ENSMGAG00000008696	SNRPN	95	85.965	ENSPPAG00000027650	SNRPN	92	85.909	Pan_paniscus
ENSMGAG00000008696	SNRPN	97	63.675	ENSPPAG00000034049	-	60	81.061	Pan_paniscus
ENSMGAG00000008696	SNRPN	92	85.455	ENSPPRG00000019878	-	92	85.455	Panthera_pardus
ENSMGAG00000008696	SNRPN	85	61.463	ENSPPRG00000006957	-	73	69.536	Panthera_pardus
ENSMGAG00000008696	SNRPN	95	85.088	ENSPTIG00000004537	SNRPN	92	85.000	Panthera_tigris_altaica
ENSMGAG00000008696	SNRPN	97	63.248	ENSPTRG00000052400	-	60	80.303	Pan_troglodytes
ENSMGAG00000008696	SNRPN	95	85.965	ENSPTRG00000006826	SNRPN	92	85.909	Pan_troglodytes
ENSMGAG00000008696	SNRPN	92	85.909	ENSPANG00000020142	SNRPN	92	85.909	Papio_anubis
ENSMGAG00000008696	SNRPN	92	85.909	ENSPEMG00000012911	-	92	85.909	Peromyscus_maniculatus_bairdii
ENSMGAG00000008696	SNRPN	98	82.051	ENSPEMG00000020979	-	98	82.051	Peromyscus_maniculatus_bairdii
ENSMGAG00000008696	SNRPN	92	73.182	ENSPEMG00000013920	-	91	73.636	Peromyscus_maniculatus_bairdii
ENSMGAG00000008696	SNRPN	92	88.688	ENSPCIG00000004699	-	70	89.091	Phascolarctos_cinereus
ENSMGAG00000008696	SNRPN	72	87.791	ENSPMEG00000020674	SNRPN	65	96.078	Poecilia_mexicana
ENSMGAG00000008696	SNRPN	92	85.909	ENSPPYG00000006269	SNURF	92	85.909	Pongo_abelii
ENSMGAG00000008696	SNRPN	95	85.965	ENSPCOG00000014231	SNRPN	92	85.909	Propithecus_coquereli
ENSMGAG00000008696	SNRPN	92	85.909	ENSRNOG00000059764	Snrpn	92	85.909	Rattus_norvegicus
ENSMGAG00000008696	SNRPN	92	85.909	ENSRBIG00000041765	SNRPN	92	85.909	Rhinopithecus_bieti
ENSMGAG00000008696	SNRPN	92	85.909	ENSRROG00000035157	SNRPN	92	85.909	Rhinopithecus_roxellana
ENSMGAG00000008696	SNRPN	92	85.000	ENSSBOG00000024929	-	92	85.000	Saimiri_boliviensis_boliviensis
ENSMGAG00000008696	SNRPN	92	85.909	ENSSBOG00000000110	-	92	85.909	Saimiri_boliviensis_boliviensis
ENSMGAG00000008696	SNRPN	92	89.091	ENSSHAG00000010257	-	90	89.091	Sarcophilus_harrisii
ENSMGAG00000008696	SNRPN	95	85.463	ENSSSCG00000028124	SNRPN	95	85.455	Sus_scrofa
ENSMGAG00000008696	SNRPN	92	85.000	ENSTTRG00000010966	SNRPN	81	85.000	Tursiops_truncatus
ENSMGAG00000008696	SNRPN	93	86.996	ENSUAMG00000016284	SNRPN	72	90.291	Ursus_americanus
ENSMGAG00000008696	SNRPN	92	85.455	ENSUMAG00000025589	SNRPN	92	85.455	Ursus_maritimus
ENSMGAG00000008696	SNRPN	95	85.526	ENSVVUG00000017971	SNRPN	90	85.455	Vulpes_vulpes