EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000009238 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 7691 bases
Position: chr4:31279090-31286780
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000009553	TruB_N	PF01509.18	6e-20	1	1
ENSMGAP00000009553	PUA	PF01472.20	7.2e-18	1	1
ENSMGAP00000009553	DKCLD	PF08068.12	3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000010380	DKC1-201	1999	-	ENSMGAP00000009553	461 (aa)	-	G1NAJ8

Gene Model

Click here to download ENSMGAG00000009238's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000009238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000009238	DKC1	87	85.504	ENSG00000130826	DKC1	99	89.320	Homo_sapiens
ENSMGAG00000009238	DKC1	88	83.663	ENSAPOG00000007799	dkc1	75	86.154	Acanthochromis_polyacanthus
ENSMGAG00000009238	DKC1	86	85.786	ENSAMEG00000002776	DKC1	78	86.398	Ailuropoda_melanoleuca
ENSMGAG00000009238	DKC1	90	81.884	ENSACIG00000022614	dkc1	82	84.557	Amphilophus_citrinellus
ENSMGAG00000009238	DKC1	88	83.663	ENSAOCG00000013159	dkc1	83	82.843	Amphiprion_ocellaris
ENSMGAG00000009238	DKC1	88	83.663	ENSAPEG00000002284	dkc1	83	82.843	Amphiprion_percula
ENSMGAG00000009238	DKC1	88	81.553	ENSATEG00000013682	dkc1	74	86.702	Anabas_testudineus
ENSMGAG00000009238	DKC1	100	82.112	ENSACAG00000015600	DKC1	68	87.310	Anolis_carolinensis
ENSMGAG00000009238	DKC1	87	85.504	ENSANAG00000022732	DKC1	77	86.650	Aotus_nancymaae
ENSMGAG00000009238	DKC1	79	90.358	ENSACLG00000015605	dkc1	74	90.358	Astatotilapia_calliptera
ENSMGAG00000009238	DKC1	88	84.483	ENSAMXG00000017108	dkc1	81	82.108	Astyanax_mexicanus
ENSMGAG00000009238	DKC1	99	80.303	ENSBTAG00000013045	DKC1	86	77.951	Bos_taurus
ENSMGAG00000009238	DKC1	80	68.378	WBGene00010478	K01G5.5	87	67.183	Caenorhabditis_elegans
ENSMGAG00000009238	DKC1	87	85.258	ENSCJAG00000004210	DKC1	77	86.683	Callithrix_jacchus
ENSMGAG00000009238	DKC1	85	83.538	ENSCAFG00000019620	-	79	83.538	Canis_familiaris
ENSMGAG00000009238	DKC1	85	75.062	ENSCAFG00000009311	-	79	75.062	Canis_familiaris
ENSMGAG00000009238	DKC1	85	83.538	ENSCAFG00020008918	-	79	83.538	Canis_lupus_dingo
ENSMGAG00000009238	DKC1	85	74.559	ENSCAFG00020009379	-	75	74.559	Canis_lupus_dingo
ENSMGAG00000009238	DKC1	97	79.510	ENSCHIG00000017392	DKC1	86	77.951	Capra_hircus
ENSMGAG00000009238	DKC1	87	83.933	ENSTSYG00000007681	DKC1	78	85.049	Carlito_syrichta
ENSMGAG00000009238	DKC1	87	85.396	ENSCAPG00000003342	DKC1	90	86.398	Cavia_aperea
ENSMGAG00000009238	DKC1	87	85.714	ENSCPOG00000008825	DKC1	78	86.683	Cavia_porcellus
ENSMGAG00000009238	DKC1	87	75.676	ENSCCAG00000027418	DKC1	75	76.633	Cebus_capucinus
ENSMGAG00000009238	DKC1	87	85.258	ENSCATG00000033602	DKC1	77	86.432	Cercocebus_atys
ENSMGAG00000009238	DKC1	87	86.700	ENSCLAG00000000720	DKC1	78	87.879	Chinchilla_lanigera
ENSMGAG00000009238	DKC1	87	85.258	ENSCSAG00000006706	DKC1	77	86.432	Chlorocebus_sabaeus
ENSMGAG00000009238	DKC1	100	86.825	ENSCPBG00000005858	DKC1	82	90.649	Chrysemys_picta_bellii
ENSMGAG00000009238	DKC1	87	75.990	ENSCING00000004599	-	75	77.468	Ciona_intestinalis
ENSMGAG00000009238	DKC1	84	78.866	ENSCSAVG00000010047	-	89	77.778	Ciona_savignyi
ENSMGAG00000009238	DKC1	87	85.258	ENSCANG00000027987	DKC1	77	86.432	Colobus_angolensis_palliatus
ENSMGAG00000009238	DKC1	71	69.512	ENSCGRG00001016789	-	73	69.512	Cricetulus_griseus_chok1gshd
ENSMGAG00000009238	DKC1	87	84.521	ENSCGRG00001014574	-	77	85.894	Cricetulus_griseus_chok1gshd
ENSMGAG00000009238	DKC1	71	69.512	ENSCGRG00000014809	-	72	69.512	Cricetulus_griseus_crigri
ENSMGAG00000009238	DKC1	87	84.521	ENSCGRG00000016075	-	77	85.894	Cricetulus_griseus_crigri
ENSMGAG00000009238	DKC1	87	83.208	ENSCSEG00000012633	dkc1	77	89.256	Cynoglossus_semilaevis
ENSMGAG00000009238	DKC1	89	82.282	ENSCVAG00000010155	dkc1	75	85.128	Cyprinodon_variegatus
ENSMGAG00000009238	DKC1	84	85.090	ENSDARG00000016484	dkc1	76	84.810	Danio_rerio
ENSMGAG00000009238	DKC1	100	82.151	ENSDNOG00000004218	DKC1	89	79.785	Dasypus_novemcinctus
ENSMGAG00000009238	DKC1	53	75.309	ENSDORG00000013566	-	78	75.309	Dipodomys_ordii
ENSMGAG00000009238	DKC1	88	70.443	FBgn0259937	Nop60B	77	71.684	Drosophila_melanogaster
ENSMGAG00000009238	DKC1	87	81.572	ENSETEG00000016095	DKC1	81	82.663	Echinops_telfairi
ENSMGAG00000009238	DKC1	63	82.007	ENSEBUG00000015962	dkc1	98	82.007	Eptatretus_burgeri
ENSMGAG00000009238	DKC1	87	83.816	ENSEASG00005007484	DKC1	78	85.012	Equus_asinus_asinus
ENSMGAG00000009238	DKC1	87	83.816	ENSECAG00000023524	DKC1	78	85.012	Equus_caballus
ENSMGAG00000009238	DKC1	85	85.427	ENSEEUG00000003323	DKC1	94	85.427	Erinaceus_europaeus
ENSMGAG00000009238	DKC1	91	82.423	ENSELUG00000014538	dkc1	76	85.859	Esox_lucius
ENSMGAG00000009238	DKC1	85	86.398	ENSFCAG00000006577	DKC1	78	86.398	Felis_catus
ENSMGAG00000009238	DKC1	86	93.797	ENSFALG00000011496	DKC1	89	89.722	Ficedula_albicollis
ENSMGAG00000009238	DKC1	87	85.468	ENSFDAG00000002516	DKC1	78	86.935	Fukomys_damarensis
ENSMGAG00000009238	DKC1	87	84.250	ENSFHEG00000004627	dkc1	77	84.383	Fundulus_heteroclitus
ENSMGAG00000009238	DKC1	79	89.227	ENSGMOG00000017277	dkc1	93	89.227	Gadus_morhua
ENSMGAG00000009238	DKC1	100	98.698	ENSGALG00000005054	DKC1	89	98.698	Gallus_gallus
ENSMGAG00000009238	DKC1	89	83.010	ENSGAFG00000011486	dkc1	66	85.641	Gambusia_affinis
ENSMGAG00000009238	DKC1	79	88.674	ENSGACG00000004373	dkc1	96	88.450	Gasterosteus_aculeatus
ENSMGAG00000009238	DKC1	100	87.905	ENSGAGG00000011330	DKC1	76	91.624	Gopherus_agassizii
ENSMGAG00000009238	DKC1	87	85.504	ENSGGOG00000001045	DKC1	77	86.683	Gorilla_gorilla
ENSMGAG00000009238	DKC1	94	79.493	ENSHBUG00000012436	dkc1	77	85.354	Haplochromis_burtoni
ENSMGAG00000009238	DKC1	88	85.294	ENSHGLG00000000649	DKC1	77	86.935	Heterocephalus_glaber_female
ENSMGAG00000009238	DKC1	88	85.294	ENSHGLG00100001153	DKC1	78	86.935	Heterocephalus_glaber_male
ENSMGAG00000009238	DKC1	95	79.091	ENSHCOG00000021099	dkc1	76	85.897	Hippocampus_comes
ENSMGAG00000009238	DKC1	87	84.119	ENSIPUG00000010309	dkc1	76	85.570	Ictalurus_punctatus
ENSMGAG00000009238	DKC1	87	77.340	ENSSTOG00000020149	-	76	78.338	Ictidomys_tridecemlineatus
ENSMGAG00000009238	DKC1	87	73.839	ENSSTOG00000011904	-	73	74.750	Ictidomys_tridecemlineatus
ENSMGAG00000009238	DKC1	87	85.049	ENSSTOG00000001074	-	82	86.216	Ictidomys_tridecemlineatus
ENSMGAG00000009238	DKC1	53	75.309	ENSJJAG00000010086	-	78	75.309	Jaculus_jaculus
ENSMGAG00000009238	DKC1	87	82.957	ENSKMAG00000008010	dkc1	77	83.503	Kryptolebias_marmoratus
ENSMGAG00000009238	DKC1	87	83.750	ENSLBEG00000019122	dkc1	78	84.872	Labrus_bergylta
ENSMGAG00000009238	DKC1	94	82.949	ENSLACG00000014025	DKC1	82	90.055	Latimeria_chalumnae
ENSMGAG00000009238	DKC1	88	84.767	ENSLOCG00000013713	dkc1	81	86.582	Lepisosteus_oculatus
ENSMGAG00000009238	DKC1	87	84.767	ENSLAFG00000000221	DKC1	77	85.930	Loxodonta_africana
ENSMGAG00000009238	DKC1	87	85.012	ENSMFAG00000032398	DKC1	67	86.181	Macaca_fascicularis
ENSMGAG00000009238	DKC1	87	85.258	ENSMMUG00000005768	DKC1	77	86.432	Macaca_mulatta
ENSMGAG00000009238	DKC1	87	85.258	ENSMNEG00000034503	DKC1	77	86.432	Macaca_nemestrina
ENSMGAG00000009238	DKC1	87	85.258	ENSMLEG00000034422	DKC1	77	86.432	Mandrillus_leucophaeus
ENSMGAG00000009238	DKC1	80	90.217	ENSMAMG00000005427	dkc1	82	90.217	Mastacembelus_armatus
ENSMGAG00000009238	DKC1	94	79.724	ENSMZEG00005014503	dkc1	77	85.606	Maylandia_zebra
ENSMGAG00000009238	DKC1	53	74.897	ENSMAUG00000016454	-	78	74.897	Mesocricetus_auratus
ENSMGAG00000009238	DKC1	87	83.538	ENSMICG00000038751	-	79	85.101	Microcebus_murinus
ENSMGAG00000009238	DKC1	87	75.735	ENSMICG00000002818	-	99	76.923	Microcebus_murinus
ENSMGAG00000009238	DKC1	53	72.016	ENSMOCG00000001169	-	78	72.016	Microtus_ochrogaster
ENSMGAG00000009238	DKC1	79	89.532	ENSMMOG00000020348	dkc1	79	89.532	Mola_mola
ENSMGAG00000009238	DKC1	86	84.887	ENSMODG00000009243	DKC1	69	85.533	Monodelphis_domestica
ENSMGAG00000009238	DKC1	88	82.921	ENSMALG00000009454	dkc1	75	85.090	Monopterus_albus
ENSMGAG00000009238	DKC1	87	73.253	MGP_CAROLIEiJ_G0033191	Dkc1	63	92.391	Mus_caroli
ENSMGAG00000009238	DKC1	87	83.951	ENSMUSG00000031403	Dkc1	78	85.176	Mus_musculus
ENSMGAG00000009238	DKC1	87	84.615	MGP_PahariEiJ_G0031735	Dkc1	78	85.427	Mus_pahari
ENSMGAG00000009238	DKC1	87	83.951	MGP_SPRETEiJ_G0034351	Dkc1	78	85.176	Mus_spretus
ENSMGAG00000009238	DKC1	87	82.809	ENSMPUG00000016136	DKC1	76	83.784	Mustela_putorius_furo
ENSMGAG00000009238	DKC1	89	78.313	ENSMLUG00000011918	DKC1	77	80.250	Myotis_lucifugus
ENSMGAG00000009238	DKC1	53	75.309	ENSNGAG00000015724	-	78	75.309	Nannospalax_galili
ENSMGAG00000009238	DKC1	79	90.909	ENSNBRG00000005638	dkc1	73	90.909	Neolamprologus_brichardi
ENSMGAG00000009238	DKC1	87	85.258	ENSNLEG00000014323	DKC1	77	86.432	Nomascus_leucogenys
ENSMGAG00000009238	DKC1	85	82.398	ENSMEUG00000001066	DKC1	85	82.398	Notamacropus_eugenii
ENSMGAG00000009238	DKC1	62	91.549	ENSOPRG00000005248	DKC1	57	91.549	Ochotona_princeps
ENSMGAG00000009238	DKC1	81	88.654	ENSODEG00000011816	-	78	87.437	Octodon_degus
ENSMGAG00000009238	DKC1	53	75.309	ENSODEG00000000549	-	78	75.309	Octodon_degus
ENSMGAG00000009238	DKC1	94	79.724	ENSONIG00000013889	dkc1	77	85.859	Oreochromis_niloticus
ENSMGAG00000009238	DKC1	99	85.033	ENSOANG00000008713	-	82	88.131	Ornithorhynchus_anatinus
ENSMGAG00000009238	DKC1	75	63.333	ENSOANG00000022295	-	82	63.140	Ornithorhynchus_anatinus
ENSMGAG00000009238	DKC1	87	85.749	ENSOCUG00000012646	DKC1	78	86.935	Oryctolagus_cuniculus
ENSMGAG00000009238	DKC1	95	78.719	ENSORLG00000018748	dkc1	72	88.798	Oryzias_latipes
ENSMGAG00000009238	DKC1	87	83.663	ENSOMEG00000005786	dkc1	70	89.756	Oryzias_melastigma
ENSMGAG00000009238	DKC1	87	83.933	ENSOGAG00000003399	DKC1	78	85.049	Otolemur_garnettii
ENSMGAG00000009238	DKC1	97	79.510	ENSOARG00000003047	DKC1	86	77.951	Ovis_aries
ENSMGAG00000009238	DKC1	87	84.275	ENSPPAG00000023820	DKC1	77	86.683	Pan_paniscus
ENSMGAG00000009238	DKC1	85	86.398	ENSPPRG00000009104	DKC1	78	86.398	Panthera_pardus
ENSMGAG00000009238	DKC1	85	85.242	ENSPTIG00000017469	DKC1	78	85.242	Panthera_tigris_altaica
ENSMGAG00000009238	DKC1	87	85.504	ENSPTRG00000043416	-	67	86.683	Pan_troglodytes
ENSMGAG00000009238	DKC1	87	85.504	ENSPTRG00000022449	DKC1	77	86.683	Pan_troglodytes
ENSMGAG00000009238	DKC1	87	85.258	ENSPANG00000011978	DKC1	77	86.432	Papio_anubis
ENSMGAG00000009238	DKC1	87	85.644	ENSPKIG00000008443	dkc1	77	91.460	Paramormyrops_kingsleyae
ENSMGAG00000009238	DKC1	71	94.225	ENSPSIG00000013765	DKC1	79	94.225	Pelodiscus_sinensis
ENSMGAG00000009238	DKC1	88	76.442	ENSPMGG00000004097	dkc1	66	85.399	Periophthalmus_magnuspinnatus
ENSMGAG00000009238	DKC1	69	91.304	ENSPEMG00000013348	Dkc1	74	48.259	Peromyscus_maniculatus_bairdii
ENSMGAG00000009238	DKC1	84	86.856	ENSPCIG00000016706	DKC1	66	86.768	Phascolarctos_cinereus
ENSMGAG00000009238	DKC1	89	83.212	ENSPFOG00000018653	dkc1	76	85.897	Poecilia_formosa
ENSMGAG00000009238	DKC1	89	83.212	ENSPLAG00000003272	dkc1	69	85.897	Poecilia_latipinna
ENSMGAG00000009238	DKC1	89	83.212	ENSPMEG00000010413	dkc1	76	85.897	Poecilia_mexicana
ENSMGAG00000009238	DKC1	89	83.252	ENSPREG00000004100	dkc1	71	90.083	Poecilia_reticulata
ENSMGAG00000009238	DKC1	87	85.504	ENSPPYG00000020892	DKC1	78	86.683	Pongo_abelii
ENSMGAG00000009238	DKC1	80	87.871	ENSPCAG00000015034	DKC1	72	87.871	Procavia_capensis
ENSMGAG00000009238	DKC1	87	85.504	ENSPCOG00000026874	DKC1	77	86.683	Propithecus_coquereli
ENSMGAG00000009238	DKC1	87	83.623	ENSPVAG00000009222	DKC1	77	84.987	Pteropus_vampyrus
ENSMGAG00000009238	DKC1	94	79.405	ENSPNYG00000020063	dkc1	79	84.712	Pundamilia_nyererei
ENSMGAG00000009238	DKC1	88	84.198	ENSPNAG00000005780	dkc1	73	89.617	Pygocentrus_nattereri
ENSMGAG00000009238	DKC1	87	81.572	ENSRNOG00000055562	Dkc1	78	82.872	Rattus_norvegicus
ENSMGAG00000009238	DKC1	87	85.258	ENSRBIG00000028457	DKC1	67	86.432	Rhinopithecus_bieti
ENSMGAG00000009238	DKC1	87	85.258	ENSRROG00000044780	DKC1	77	86.432	Rhinopithecus_roxellana
ENSMGAG00000009238	DKC1	78	73.056	YLR175W	-	80	69.152	Saccharomyces_cerevisiae
ENSMGAG00000009238	DKC1	100	81.720	ENSSBOG00000033746	DKC1	77	86.432	Saimiri_boliviensis_boliviensis
ENSMGAG00000009238	DKC1	87	85.786	ENSSHAG00000002463	DKC1	83	86.768	Sarcophilus_harrisii
ENSMGAG00000009238	DKC1	87	84.483	ENSSFOG00015009585	dkc1	76	86.410	Scleropages_formosus
ENSMGAG00000009238	DKC1	88	83.047	ENSSMAG00000002552	dkc1	81	82.793	Scophthalmus_maximus
ENSMGAG00000009238	DKC1	93	81.265	ENSSDUG00000009963	dkc1	76	86.118	Seriola_dumerili
ENSMGAG00000009238	DKC1	94	80.831	ENSSLDG00000019342	dkc1	83	84.596	Seriola_lalandi_dorsalis
ENSMGAG00000009238	DKC1	87	80.149	ENSSARG00000001822	DKC1	79	80.653	Sorex_araneus
ENSMGAG00000009238	DKC1	100	83.755	ENSSPUG00000018907	DKC1	77	87.407	Sphenodon_punctatus
ENSMGAG00000009238	DKC1	87	83.750	ENSSPAG00000002585	dkc1	70	88.828	Stegastes_partitus
ENSMGAG00000009238	DKC1	85	83.292	ENSSSCG00000012823	DKC1	81	85.861	Sus_scrofa
ENSMGAG00000009238	DKC1	100	94.360	ENSTGUG00000006781	DKC1	100	94.360	Taeniopygia_guttata
ENSMGAG00000009238	DKC1	88	83.416	ENSTRUG00000004413	dkc1	78	85.641	Takifugu_rubripes
ENSMGAG00000009238	DKC1	99	64.795	ENSTNIG00000002582	dkc1	89	62.771	Tetraodon_nigroviridis
ENSMGAG00000009238	DKC1	64	83.612	ENSTBEG00000011262	DKC1	84	83.607	Tupaia_belangeri
ENSMGAG00000009238	DKC1	94	79.493	ENSUAMG00000022721	DKC1	82	86.889	Ursus_americanus
ENSMGAG00000009238	DKC1	94	78.571	ENSUMAG00000016899	DKC1	89	89.256	Ursus_maritimus
ENSMGAG00000009238	DKC1	85	82.367	ENSVVUG00000020734	-	71	82.367	Vulpes_vulpes
ENSMGAG00000009238	DKC1	86	69.173	ENSVVUG00000021671	-	71	70.649	Vulpes_vulpes
ENSMGAG00000009238	DKC1	87	84.712	ENSXETG00000032517	DKC1	81	81.731	Xenopus_tropicalis
ENSMGAG00000009238	DKC1	89	82.524	ENSXCOG00000005498	dkc1	78	89.807	Xiphophorus_couchianus
ENSMGAG00000009238	DKC1	89	82.767	ENSXMAG00000004919	dkc1	77	85.385	Xiphophorus_maculatus