EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMGAG00000011054 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Meleagris_gallopavo
Status
putative
Strand
Plus strand
Length
58578 bases
Position
chr7:22830181-22888758
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMGAP00000011553RRM_1PF00076.223.9e-3312
ENSMGAP00000011553RRM_1PF00076.223.9e-3322
ENSMGAP00000011559RRM_1PF00076.229.9e-2612
ENSMGAP00000011559RRM_1PF00076.229.9e-2622
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMGAT00000012431RBMS1-2011287-ENSMGAP00000011553373 (aa)-G1NF04
ENSMGAT00000012437RBMS1-2021132-ENSMGAP00000011559329 (aa)-G1NF07
Gene Model
Click here to download ENSMGAG00000011054's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000011054's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMGAG00000011054RBMS19730.370ENSMGAG00000012239PABPC17630.370
ENSMGAG00000011054RBMS15036.224ENSMGAG00000010928ELAVL46336.667
ENSMGAG00000011054RBMS15136.364ENSMGAG00000001015ELAVL19136.364
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMGAG00000011054RBMS110092.097ENSG00000153250RBMS110098.425Homo_sapiens
ENSMGAG00000011054RBMS19863.580ENSAPOG00000013761rbms1a8965.130Acanthochromis_polyacanthus
ENSMGAG00000011054RBMS110079.331ENSAPOG00000024437-9474.931Acanthochromis_polyacanthus
ENSMGAG00000011054RBMS110090.390ENSAMEG00000012661RBMS19291.573Ailuropoda_melanoleuca
ENSMGAG00000011054RBMS18463.768ENSACIG00000000113rbms1a8165.217Amphilophus_citrinellus
ENSMGAG00000011054RBMS110079.331ENSACIG00000021498RBMS18880.114Amphilophus_citrinellus
ENSMGAG00000011054RBMS110079.331ENSAOCG00000014482-9475.691Amphiprion_ocellaris
ENSMGAG00000011054RBMS19863.580ENSAOCG00000010066rbms1a8965.130Amphiprion_ocellaris
ENSMGAG00000011054RBMS19863.580ENSAPEG00000023563rbms1a8965.130Amphiprion_percula
ENSMGAG00000011054RBMS110079.027ENSAPEG00000018371-8880.114Amphiprion_percula
ENSMGAG00000011054RBMS19864.506ENSATEG00000015450rbms1a8965.994Anabas_testudineus
ENSMGAG00000011054RBMS110078.419ENSATEG00000018573RBMS18979.545Anabas_testudineus
ENSMGAG00000011054RBMS110098.928ENSAPLG00000007282RBMS19498.928Anas_platyrhynchos
ENSMGAG00000011054RBMS110096.267ENSACAG00000011984RBMS17796.267Anolis_carolinensis
ENSMGAG00000011054RBMS19893.168ENSANAG00000024424RBMS110093.168Aotus_nancymaae
ENSMGAG00000011054RBMS19863.272ENSACLG00000021512rbms1a9064.553Astatotilapia_calliptera
ENSMGAG00000011054RBMS110078.552ENSACLG00000013048RBMS18878.409Astatotilapia_calliptera
ENSMGAG00000011054RBMS110073.252ENSAMXG00000002146rbms1a8874.716Astyanax_mexicanus
ENSMGAG00000011054RBMS110079.947ENSAMXG00000009969RBMS19480.682Astyanax_mexicanus
ENSMGAG00000011054RBMS110093.313ENSBTAG00000005180RBMS18794.318Bos_taurus
ENSMGAG00000011054RBMS110092.401ENSCJAG00000014861-8992.330Callithrix_jacchus
ENSMGAG00000011054RBMS110086.018ENSCJAG00000022465-9586.932Callithrix_jacchus
ENSMGAG00000011054RBMS110090.080ENSCJAG00000012871-9389.773Callithrix_jacchus
ENSMGAG00000011054RBMS110092.401ENSCAFG00000009922RBMS18793.466Canis_familiaris
ENSMGAG00000011054RBMS110091.489ENSCAFG00020006120RBMS18792.614Canis_lupus_dingo
ENSMGAG00000011054RBMS110092.401ENSCHIG00000023380RBMS18793.466Capra_hircus
ENSMGAG00000011054RBMS110092.097ENSTSYG00000005584RBMS19492.330Carlito_syrichta
ENSMGAG00000011054RBMS110091.489ENSCPOG00000012310RBMS19387.772Cavia_porcellus
ENSMGAG00000011054RBMS110092.401ENSCCAG00000033841RBMS19193.182Cebus_capucinus
ENSMGAG00000011054RBMS110092.097ENSCATG00000043032RBMS19492.330Cercocebus_atys
ENSMGAG00000011054RBMS110091.793ENSCLAG00000003031RBMS19588.043Chinchilla_lanigera
ENSMGAG00000011054RBMS110092.097ENSCSAG00000015687RBMS18793.182Chlorocebus_sabaeus
ENSMGAG00000011054RBMS15097.030ENSCHOG00000001579RBMS16297.030Choloepus_hoffmanni
ENSMGAG00000011054RBMS110098.391ENSCPBG00000026455RBMS19398.391Chrysemys_picta_bellii
ENSMGAG00000011054RBMS110092.097ENSCANG00000042152RBMS19492.330Colobus_angolensis_palliatus
ENSMGAG00000011054RBMS110091.185ENSCGRG00001022833Rbms18792.330Cricetulus_griseus_chok1gshd
ENSMGAG00000011054RBMS110091.185ENSCGRG00000008824Rbms19388.315Cricetulus_griseus_crigri
ENSMGAG00000011054RBMS110076.267ENSCSEG00000010652RBMS19476.136Cynoglossus_semilaevis
ENSMGAG00000011054RBMS19762.810ENSCSEG00000000889rbms1a9063.401Cynoglossus_semilaevis
ENSMGAG00000011054RBMS19765.014ENSCVAG00000014698rbms1a8965.418Cyprinodon_variegatus
ENSMGAG00000011054RBMS110078.419ENSCVAG00000002027RBMS19678.977Cyprinodon_variegatus
ENSMGAG00000011054RBMS110073.556ENSDARG00000074023rbms1a8775.000Danio_rerio
ENSMGAG00000011054RBMS110088.116ENSDNOG00000040691RBMS19589.402Dasypus_novemcinctus
ENSMGAG00000011054RBMS110091.793ENSDORG00000007103Rbms19588.043Dipodomys_ordii
ENSMGAG00000011054RBMS110079.027ENSETEG00000012135RBMS19280.966Echinops_telfairi
ENSMGAG00000011054RBMS110092.097ENSEASG00005023132RBMS18793.182Equus_asinus_asinus
ENSMGAG00000011054RBMS110092.097ENSECAG00000019894RBMS18793.182Equus_caballus
ENSMGAG00000011054RBMS17297.959ENSEEUG00000005628RBMS16697.959Erinaceus_europaeus
ENSMGAG00000011054RBMS110065.758ENSELUG00000018923rbms1a9567.989Esox_lucius
ENSMGAG00000011054RBMS19176.000ENSELUG00000019328RBMS18672.159Esox_lucius
ENSMGAG00000011054RBMS110091.793ENSFCAG00000012524RBMS19492.045Felis_catus
ENSMGAG00000011054RBMS110099.196ENSFALG00000004440RBMS110099.196Ficedula_albicollis
ENSMGAG00000011054RBMS110092.097ENSFDAG00000015692RBMS19388.315Fukomys_damarensis
ENSMGAG00000011054RBMS110077.508ENSFHEG00000000720RBMS18978.125Fundulus_heteroclitus
ENSMGAG00000011054RBMS19765.565ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSMGAG00000011054RBMS19560.681ENSGMOG00000000525rbms1a9961.453Gadus_morhua
ENSMGAG00000011054RBMS1100100.000ENSGALG00000011132RBMS1100100.000Gallus_gallus
ENSMGAG00000011054RBMS19864.506ENSGAFG00000011633rbms1a9565.994Gambusia_affinis
ENSMGAG00000011054RBMS110076.900ENSGAFG00000007708RBMS18877.557Gambusia_affinis
ENSMGAG00000011054RBMS110076.292ENSGACG00000005671RBMS18977.557Gasterosteus_aculeatus
ENSMGAG00000011054RBMS19860.000ENSGACG00000015174rbms1a9166.564Gasterosteus_aculeatus
ENSMGAG00000011054RBMS110098.123ENSGAGG00000007866RBMS19398.123Gopherus_agassizii
ENSMGAG00000011054RBMS110089.970ENSGGOG00000043756-8790.909Gorilla_gorilla
ENSMGAG00000011054RBMS110092.097ENSGGOG00000001264RBMS19492.045Gorilla_gorilla
ENSMGAG00000011054RBMS19863.272ENSHBUG00000004802rbms1a9064.553Haplochromis_burtoni
ENSMGAG00000011054RBMS19279.934ENSHBUG00000004516RBMS19280.734Haplochromis_burtoni
ENSMGAG00000011054RBMS110091.489ENSHGLG00000010387RBMS18992.614Heterocephalus_glaber_female
ENSMGAG00000011054RBMS110091.489ENSHGLG00100014105RBMS19387.772Heterocephalus_glaber_male
ENSMGAG00000011054RBMS19862.654ENSHCOG00000020097rbms1a8964.265Hippocampus_comes
ENSMGAG00000011054RBMS110074.164ENSHCOG00000016668RBMS18875.284Hippocampus_comes
ENSMGAG00000011054RBMS110081.501ENSIPUG00000014677RBMS18882.102Ictalurus_punctatus
ENSMGAG00000011054RBMS110073.556ENSIPUG00000010131RBMS18875.000Ictalurus_punctatus
ENSMGAG00000011054RBMS110091.793ENSSTOG00000012501RBMS19388.043Ictidomys_tridecemlineatus
ENSMGAG00000011054RBMS110090.578ENSJJAG00000016543Rbms19587.772Jaculus_jaculus
ENSMGAG00000011054RBMS19763.361ENSKMAG00000011839-8963.977Kryptolebias_marmoratus
ENSMGAG00000011054RBMS110079.331ENSKMAG00000013911RBMS18880.114Kryptolebias_marmoratus
ENSMGAG00000011054RBMS110078.116ENSLBEG00000005787RBMS18879.261Labrus_bergylta
ENSMGAG00000011054RBMS19863.580ENSLBEG00000025962rbms1a8965.130Labrus_bergylta
ENSMGAG00000011054RBMS110085.843ENSLACG00000004324RBMS110080.069Latimeria_chalumnae
ENSMGAG00000011054RBMS110086.322ENSLOCG00000008622rbms1a8887.216Lepisosteus_oculatus
ENSMGAG00000011054RBMS110090.881ENSLAFG00000017217RBMS19292.045Loxodonta_africana
ENSMGAG00000011054RBMS110092.097ENSMFAG00000000274RBMS19492.330Macaca_fascicularis
ENSMGAG00000011054RBMS110092.097ENSMMUG00000016825RBMS19293.182Macaca_mulatta
ENSMGAG00000011054RBMS110092.097ENSMNEG00000039425RBMS19492.330Macaca_nemestrina
ENSMGAG00000011054RBMS110091.793ENSMLEG00000031517RBMS19492.045Mandrillus_leucophaeus
ENSMGAG00000011054RBMS110077.204ENSMAMG00000003159-9278.348Mastacembelus_armatus
ENSMGAG00000011054RBMS19762.810ENSMAMG00000005018rbms1a8963.401Mastacembelus_armatus
ENSMGAG00000011054RBMS19863.272ENSMZEG00005005661rbms1a9064.553Maylandia_zebra
ENSMGAG00000011054RBMS19279.276ENSMZEG00005007313RBMS19180.122Maylandia_zebra
ENSMGAG00000011054RBMS110090.578ENSMAUG00000008550Rbms18791.761Mesocricetus_auratus
ENSMGAG00000011054RBMS110092.401ENSMICG00000008325RBMS19293.466Microcebus_murinus
ENSMGAG00000011054RBMS110089.970ENSMOCG00000022617Rbms19587.228Microtus_ochrogaster
ENSMGAG00000011054RBMS110077.204ENSMMOG00000003707RBMS18878.409Mola_mola
ENSMGAG00000011054RBMS18467.509ENSMMOG00000018249rbms1a8169.000Mola_mola
ENSMGAG00000011054RBMS110095.442ENSMODG00000005250RBMS19295.442Monodelphis_domestica
ENSMGAG00000011054RBMS19579.743ENSMALG00000015715-9078.977Monopterus_albus
ENSMGAG00000011054RBMS19863.580ENSMALG00000014235rbms1a8965.130Monopterus_albus
ENSMGAG00000011054RBMS110089.362MGP_CAROLIEiJ_G0023586Rbms19586.685Mus_caroli
ENSMGAG00000011054RBMS110089.362ENSMUSG00000026970Rbms19586.685Mus_musculus
ENSMGAG00000011054RBMS110089.058MGP_PahariEiJ_G0025037Rbms18790.341Mus_pahari
ENSMGAG00000011054RBMS110089.666MGP_SPRETEiJ_G0024508Rbms19586.957Mus_spretus
ENSMGAG00000011054RBMS110087.246ENSMPUG00000000539RBMS18788.587Mustela_putorius_furo
ENSMGAG00000011054RBMS110085.879ENSMLUG00000008762RBMS18887.297Myotis_lucifugus
ENSMGAG00000011054RBMS110091.185ENSNGAG00000013636Rbms18792.330Nannospalax_galili
ENSMGAG00000011054RBMS18566.667ENSNBRG00000020217rbms1a8567.881Neolamprologus_brichardi
ENSMGAG00000011054RBMS110074.164ENSNBRG00000015151RBMS19475.284Neolamprologus_brichardi
ENSMGAG00000011054RBMS110092.097ENSNLEG00000001667RBMS19492.045Nomascus_leucogenys
ENSMGAG00000011054RBMS19883.540ENSMEUG00000000746RBMS110083.540Notamacropus_eugenii
ENSMGAG00000011054RBMS110084.195ENSOPRG00000012431RBMS18785.795Ochotona_princeps
ENSMGAG00000011054RBMS110090.881ENSODEG00000013934RBMS19588.043Octodon_degus
ENSMGAG00000011054RBMS110078.419ENSONIG00000008934RBMS18879.261Oreochromis_niloticus
ENSMGAG00000011054RBMS19864.198ENSONIG00000003329rbms1a8865.418Oreochromis_niloticus
ENSMGAG00000011054RBMS16656.432ENSOANG00000004477-9957.787Ornithorhynchus_anatinus
ENSMGAG00000011054RBMS110097.051ENSOANG00000006166RBMS19497.051Ornithorhynchus_anatinus
ENSMGAG00000011054RBMS110090.578ENSOCUG00000017365RBMS18291.761Oryctolagus_cuniculus
ENSMGAG00000011054RBMS19576.997ENSORLG00000016818RBMS18977.054Oryzias_latipes
ENSMGAG00000011054RBMS19762.810ENSORLG00000003917rbms1a9063.401Oryzias_latipes
ENSMGAG00000011054RBMS19576.677ENSORLG00020022335RBMS18976.771Oryzias_latipes_hni
ENSMGAG00000011054RBMS19762.534ENSORLG00020018663rbms1a9063.112Oryzias_latipes_hni
ENSMGAG00000011054RBMS19577.316ENSORLG00015018208RBMS18977.337Oryzias_latipes_hsok
ENSMGAG00000011054RBMS19762.810ENSORLG00015016556rbms1a9063.401Oryzias_latipes_hsok
ENSMGAG00000011054RBMS19578.846ENSOMEG00000002394RBMS18878.125Oryzias_melastigma
ENSMGAG00000011054RBMS110090.634ENSOGAG00000002900RBMS19491.808Otolemur_garnettii
ENSMGAG00000011054RBMS110092.401ENSOARG00000006870RBMS19588.919Ovis_aries
ENSMGAG00000011054RBMS110092.097ENSPPAG00000040083RBMS19292.898Pan_paniscus
ENSMGAG00000011054RBMS110088.146ENSPPAG00000036520-9288.920Pan_paniscus
ENSMGAG00000011054RBMS110091.793ENSPPRG00000005040RBMS19492.045Panthera_pardus
ENSMGAG00000011054RBMS110091.793ENSPTIG00000021240RBMS19492.045Panthera_tigris_altaica
ENSMGAG00000011054RBMS110088.754ENSPTRG00000039358-9989.342Pan_troglodytes
ENSMGAG00000011054RBMS110092.097ENSPTRG00000052304RBMS19292.898Pan_troglodytes
ENSMGAG00000011054RBMS110092.097ENSPANG00000001383RBMS19293.182Papio_anubis
ENSMGAG00000011054RBMS110079.331ENSPKIG00000012818rbms1a8880.682Paramormyrops_kingsleyae
ENSMGAG00000011054RBMS110080.800ENSPKIG00000001498rbms1a8881.020Paramormyrops_kingsleyae
ENSMGAG00000011054RBMS110097.319ENSPSIG00000010240RBMS19297.319Pelodiscus_sinensis
ENSMGAG00000011054RBMS19859.568ENSPMGG00000004341rbms1a9061.383Periophthalmus_magnuspinnatus
ENSMGAG00000011054RBMS19378.502ENSPMGG00000006310RBMS19570.170Periophthalmus_magnuspinnatus
ENSMGAG00000011054RBMS110091.793ENSPEMG00000009449Rbms18992.898Peromyscus_maniculatus_bairdii
ENSMGAG00000011054RBMS110095.442ENSPCIG00000018405RBMS19395.442Phascolarctos_cinereus
ENSMGAG00000011054RBMS19864.506ENSPFOG00000016116rbms1a8965.994Poecilia_formosa
ENSMGAG00000011054RBMS110076.596ENSPFOG00000017483RBMS18877.273Poecilia_formosa
ENSMGAG00000011054RBMS19864.506ENSPLAG00000013864rbms1a8965.994Poecilia_latipinna
ENSMGAG00000011054RBMS110076.900ENSPLAG00000000920RBMS18877.557Poecilia_latipinna
ENSMGAG00000011054RBMS110076.596ENSPMEG00000015838RBMS18877.273Poecilia_mexicana
ENSMGAG00000011054RBMS19864.506ENSPMEG00000016185rbms1a8965.994Poecilia_mexicana
ENSMGAG00000011054RBMS110077.204ENSPREG00000008146RBMS18877.841Poecilia_reticulata
ENSMGAG00000011054RBMS19864.506ENSPREG00000020161rbms1a8965.994Poecilia_reticulata
ENSMGAG00000011054RBMS110087.536ENSPPYG00000012879-8788.587Pongo_abelii
ENSMGAG00000011054RBMS110085.106ENSPCAG00000009673RBMS18786.648Procavia_capensis
ENSMGAG00000011054RBMS110092.401ENSPCOG00000027294RBMS19492.614Propithecus_coquereli
ENSMGAG00000011054RBMS110080.965ENSPVAG00000010429RBMS19280.965Pteropus_vampyrus
ENSMGAG00000011054RBMS110078.116ENSPNYG00000002643RBMS19176.758Pundamilia_nyererei
ENSMGAG00000011054RBMS110081.551ENSPNAG00000023479RBMS18882.386Pygocentrus_nattereri
ENSMGAG00000011054RBMS110073.860ENSPNAG00000010225rbms1a8875.284Pygocentrus_nattereri
ENSMGAG00000011054RBMS110090.274ENSRNOG00000008482Rbms19187.500Rattus_norvegicus
ENSMGAG00000011054RBMS110092.097ENSRBIG00000044262RBMS19292.918Rhinopithecus_bieti
ENSMGAG00000011054RBMS110092.097ENSRROG00000043108RBMS19293.182Rhinopithecus_roxellana
ENSMGAG00000011054RBMS110092.401ENSSBOG00000034705RBMS19493.182Saimiri_boliviensis_boliviensis
ENSMGAG00000011054RBMS110094.529ENSSHAG00000012271RBMS110089.855Sarcophilus_harrisii
ENSMGAG00000011054RBMS110079.635ENSSFOG00015014493rbms1a9580.398Scleropages_formosus
ENSMGAG00000011054RBMS19983.180ENSSFOG00015022929rbms18884.000Scleropages_formosus
ENSMGAG00000011054RBMS110076.596ENSSMAG00000012152RBMS18779.511Scophthalmus_maximus
ENSMGAG00000011054RBMS19862.963ENSSMAG00000012722rbms1a9564.553Scophthalmus_maximus
ENSMGAG00000011054RBMS19863.889ENSSDUG00000020602rbms1a9565.418Seriola_dumerili
ENSMGAG00000011054RBMS110079.331ENSSDUG00000018803RBMS18880.398Seriola_dumerili
ENSMGAG00000011054RBMS110079.027ENSSLDG00000016556RBMS19178.899Seriola_lalandi_dorsalis
ENSMGAG00000011054RBMS19863.889ENSSLDG00000009495rbms1a8965.418Seriola_lalandi_dorsalis
ENSMGAG00000011054RBMS110059.574ENSSARG00000011085RBMS18762.784Sorex_araneus
ENSMGAG00000011054RBMS110097.861ENSSPUG00000017163RBMS110097.861Sphenodon_punctatus
ENSMGAG00000011054RBMS19863.272ENSSPAG00000005371rbms1a8964.841Stegastes_partitus
ENSMGAG00000011054RBMS110079.635ENSSPAG00000000059RBMS18880.682Stegastes_partitus
ENSMGAG00000011054RBMS110092.097ENSSSCG00000015888RBMS18793.182Sus_scrofa
ENSMGAG00000011054RBMS110099.196ENSTGUG00000006606RBMS19299.196Taeniopygia_guttata
ENSMGAG00000011054RBMS110075.988ENSTRUG00000005466-8877.273Takifugu_rubripes
ENSMGAG00000011054RBMS19862.037ENSTRUG00000017155rbms1a8964.368Takifugu_rubripes
ENSMGAG00000011054RBMS110078.116ENSTNIG00000016496RBMS19779.261Tetraodon_nigroviridis
ENSMGAG00000011054RBMS19464.194ENSTNIG00000009477rbms1a9962.577Tetraodon_nigroviridis
ENSMGAG00000011054RBMS110084.182ENSTBEG00000016156RBMS19884.182Tupaia_belangeri
ENSMGAG00000011054RBMS110092.401ENSTTRG00000011058RBMS19293.466Tursiops_truncatus
ENSMGAG00000011054RBMS110091.489ENSUAMG00000022331RBMS18792.614Ursus_americanus
ENSMGAG00000011054RBMS110091.489ENSUMAG00000008605RBMS19092.614Ursus_maritimus
ENSMGAG00000011054RBMS19292.434ENSVPAG00000002716RBMS18693.578Vicugna_pacos
ENSMGAG00000011054RBMS110091.489ENSVVUG00000018682RBMS19492.614Vulpes_vulpes
ENSMGAG00000011054RBMS110085.829ENSXETG00000016204rbms19586.479Xenopus_tropicalis
ENSMGAG00000011054RBMS19762.259ENSXCOG00000001659rbms1a8962.824Xiphophorus_couchianus
ENSMGAG00000011054RBMS110076.900ENSXCOG00000000211RBMS19577.557Xiphophorus_couchianus
ENSMGAG00000011054RBMS110076.900ENSXMAG00000011405RBMS19474.148Xiphophorus_maculatus
ENSMGAG00000011054RBMS19864.506ENSXMAG00000001802rbms1a8965.994Xiphophorus_maculatus

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