EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000011058 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 3122 bases
Position: chr4:40244522-40247643
Accession: 100543768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000011527	Gar1	PF04410.14	7.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000012405	GAR1-201	681	-	ENSMGAP00000011527	226 (aa)	XP_010708305	G1NEY1

Gene Model

Click here to download ENSMGAG00000011058's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000011058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000011058	GAR1	58	78.626	ENSACAG00000010031	GAR1	50	87.850	Anolis_carolinensis
ENSMGAG00000011058	GAR1	63	74.648	ENSTSYG00000026632	-	54	83.019	Carlito_syrichta
ENSMGAG00000011058	GAR1	56	90.476	ENSCATG00000021854	GAR1	54	91.509	Cercocebus_atys
ENSMGAG00000011058	GAR1	56	88.976	ENSDNOG00000037632	GAR1	54	91.509	Dasypus_novemcinctus
ENSMGAG00000011058	GAR1	50	89.286	ENSFHEG00000008068	gar1	50	91.509	Fundulus_heteroclitus
ENSMGAG00000011058	GAR1	66	79.333	ENSHGLG00000000493	GAR1	72	92.727	Heterocephalus_glaber_female
ENSMGAG00000011058	GAR1	66	81.333	ENSSTOG00000005577	GAR1	78	91.667	Ictidomys_tridecemlineatus
ENSMGAG00000011058	GAR1	50	86.607	ENSKMAG00000010402	gar1	50	89.623	Kryptolebias_marmoratus
ENSMGAG00000011058	GAR1	51	85.345	ENSMMOG00000004156	gar1	52	88.679	Mola_mola
ENSMGAG00000011058	GAR1	75	81.065	ENSNGAG00000008268	Gar1	78	91.667	Nannospalax_galili
ENSMGAG00000011058	GAR1	67	78.947	ENSOGAG00000004693	GAR1	50	91.509	Otolemur_garnettii
ENSMGAG00000011058	GAR1	65	75.229	ENSPTRG00000049340	-	50	74.528	Pan_troglodytes
ENSMGAG00000011058	GAR1	68	75.817	ENSPANG00000033062	-	63	75.817	Papio_anubis
ENSMGAG00000011058	GAR1	50	74.336	ENSRBIG00000042411	-	51	75.472	Rhinopithecus_bieti
ENSMGAG00000011058	GAR1	50	74.336	ENSRROG00000044348	-	51	75.472	Rhinopithecus_roxellana
ENSMGAG00000011058	GAR1	87	80.667	ENSTRUG00000020580	gar1	51	88.679	Takifugu_rubripes
ENSMGAG00000011058	GAR1	51	87.931	ENSTNIG00000013023	gar1	64	90.179	Tetraodon_nigroviridis