EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000011135 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 27252 bases
Position: chr8:30676291-30703542
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000011626	TruB_N	PF01509.18	6.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000012505	TRUB1-201	870	-	ENSMGAP00000011626	290 (aa)	-	G1NF60

Gene Model

Click here to download ENSMGAG00000011135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000011135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000011135	TRUB1	90	75.954	ENSG00000165832	TRUB1	75	75.954	Homo_sapiens
ENSMGAG00000011135	TRUB1	84	68.033	ENSAPOG00000020565	trub1	90	67.611	Acanthochromis_polyacanthus
ENSMGAG00000011135	TRUB1	93	72.993	ENSAMEG00000014931	TRUB1	78	72.993	Ailuropoda_melanoleuca
ENSMGAG00000011135	TRUB1	95	59.567	ENSACIG00000003060	trub1	90	59.567	Amphilophus_citrinellus
ENSMGAG00000011135	TRUB1	84	68.033	ENSAOCG00000017188	trub1	90	67.611	Amphiprion_ocellaris
ENSMGAG00000011135	TRUB1	85	68.016	ENSAPEG00000015209	trub1	90	68.016	Amphiprion_percula
ENSMGAG00000011135	TRUB1	83	68.050	ENSATEG00000023291	trub1	86	68.050	Anabas_testudineus
ENSMGAG00000011135	TRUB1	96	91.727	ENSAPLG00000006808	TRUB1	100	91.727	Anas_platyrhynchos
ENSMGAG00000011135	TRUB1	92	70.522	ENSACAG00000009282	TRUB1	97	70.522	Anolis_carolinensis
ENSMGAG00000011135	TRUB1	93	74.265	ENSANAG00000022870	TRUB1	77	74.265	Aotus_nancymaae
ENSMGAG00000011135	TRUB1	90	66.667	ENSACLG00000000823	trub1	94	66.667	Astatotilapia_calliptera
ENSMGAG00000011135	TRUB1	90	65.900	ENSAMXG00000015845	trub1	87	65.900	Astyanax_mexicanus
ENSMGAG00000011135	TRUB1	94	73.358	ENSBTAG00000012955	TRUB1	78	73.358	Bos_taurus
ENSMGAG00000011135	TRUB1	93	74.265	ENSCJAG00000047815	TRUB1	77	74.265	Callithrix_jacchus
ENSMGAG00000011135	TRUB1	93	74.265	ENSCAFG00000011688	TRUB1	78	74.265	Canis_familiaris
ENSMGAG00000011135	TRUB1	93	74.265	ENSCAFG00020013237	TRUB1	78	74.265	Canis_lupus_dingo
ENSMGAG00000011135	TRUB1	93	74.632	ENSCHIG00000020884	TRUB1	81	74.632	Capra_hircus
ENSMGAG00000011135	TRUB1	93	73.529	ENSTSYG00000000446	TRUB1	77	73.529	Carlito_syrichta
ENSMGAG00000011135	TRUB1	79	65.502	ENSCAPG00000017088	TRUB1	89	65.502	Cavia_aperea
ENSMGAG00000011135	TRUB1	63	73.913	ENSCPOG00000040236	-	75	73.913	Cavia_porcellus
ENSMGAG00000011135	TRUB1	64	72.727	ENSCPOG00000030129	-	73	72.727	Cavia_porcellus
ENSMGAG00000011135	TRUB1	94	73.723	ENSCCAG00000028842	TRUB1	78	73.723	Cebus_capucinus
ENSMGAG00000011135	TRUB1	90	75.954	ENSCATG00000033431	TRUB1	75	75.954	Cercocebus_atys
ENSMGAG00000011135	TRUB1	63	72.826	ENSCLAG00000008664	TRUB1	75	72.826	Chinchilla_lanigera
ENSMGAG00000011135	TRUB1	93	74.265	ENSCSAG00000004891	TRUB1	78	74.265	Chlorocebus_sabaeus
ENSMGAG00000011135	TRUB1	83	68.313	ENSCHOG00000011931	TRUB1	70	68.313	Choloepus_hoffmanni
ENSMGAG00000011135	TRUB1	96	79.137	ENSCPBG00000003051	TRUB1	96	79.137	Chrysemys_picta_bellii
ENSMGAG00000011135	TRUB1	93	74.265	ENSCANG00000029445	TRUB1	78	74.265	Colobus_angolensis_palliatus
ENSMGAG00000011135	TRUB1	91	65.530	ENSCGRG00001010322	-	73	65.441	Cricetulus_griseus_chok1gshd
ENSMGAG00000011135	TRUB1	82	73.109	ENSCGRG00001016772	-	80	72.917	Cricetulus_griseus_chok1gshd
ENSMGAG00000011135	TRUB1	91	73.106	ENSCGRG00000010806	Trub1	83	73.162	Cricetulus_griseus_crigri
ENSMGAG00000011135	TRUB1	84	65.164	ENSCSEG00000011261	trub1	79	65.164	Cynoglossus_semilaevis
ENSMGAG00000011135	TRUB1	86	67.470	ENSCVAG00000008791	trub1	76	67.470	Cyprinodon_variegatus
ENSMGAG00000011135	TRUB1	96	62.724	ENSDARG00000053805	trub1	96	62.724	Danio_rerio
ENSMGAG00000011135	TRUB1	93	72.059	ENSDNOG00000001069	TRUB1	80	70.714	Dasypus_novemcinctus
ENSMGAG00000011135	TRUB1	91	73.106	ENSDORG00000010431	Trub1	79	73.162	Dipodomys_ordii
ENSMGAG00000011135	TRUB1	71	69.565	ENSETEG00000009183	TRUB1	61	66.897	Echinops_telfairi
ENSMGAG00000011135	TRUB1	93	73.897	ENSEASG00005014739	TRUB1	78	73.897	Equus_asinus_asinus
ENSMGAG00000011135	TRUB1	93	73.897	ENSECAG00000007177	TRUB1	78	73.897	Equus_caballus
ENSMGAG00000011135	TRUB1	93	64.706	ENSEEUG00000013993	TRUB1	76	64.706	Erinaceus_europaeus
ENSMGAG00000011135	TRUB1	94	63.636	ENSELUG00000000502	trub1	95	63.636	Esox_lucius
ENSMGAG00000011135	TRUB1	93	74.632	ENSFCAG00000031927	TRUB1	78	74.632	Felis_catus
ENSMGAG00000011135	TRUB1	82	86.076	ENSFALG00000002232	TRUB1	91	86.076	Ficedula_albicollis
ENSMGAG00000011135	TRUB1	63	74.457	ENSFDAG00000008140	TRUB1	75	74.457	Fukomys_damarensis
ENSMGAG00000011135	TRUB1	92	63.704	ENSFHEG00000004016	trub1	93	63.704	Fundulus_heteroclitus
ENSMGAG00000011135	TRUB1	97	96.797	ENSGALG00000009091	TRUB1	99	96.797	Gallus_gallus
ENSMGAG00000011135	TRUB1	84	64.777	ENSGAFG00000009193	trub1	87	64.777	Gambusia_affinis
ENSMGAG00000011135	TRUB1	67	68.041	ENSGACG00000015387	trub1	95	68.041	Gasterosteus_aculeatus
ENSMGAG00000011135	TRUB1	95	79.348	ENSGAGG00000009758	TRUB1	77	81.041	Gopherus_agassizii
ENSMGAG00000011135	TRUB1	90	76.336	ENSGGOG00000004583	TRUB1	75	76.336	Gorilla_gorilla
ENSMGAG00000011135	TRUB1	90	66.667	ENSHBUG00000016787	trub1	94	66.667	Haplochromis_burtoni
ENSMGAG00000011135	TRUB1	90	73.282	ENSHGLG00000015314	TRUB1	75	73.282	Heterocephalus_glaber_female
ENSMGAG00000011135	TRUB1	63	73.370	ENSHGLG00100009183	TRUB1	78	73.370	Heterocephalus_glaber_male
ENSMGAG00000011135	TRUB1	85	68.421	ENSHCOG00000017877	trub1	89	68.421	Hippocampus_comes
ENSMGAG00000011135	TRUB1	85	67.611	ENSIPUG00000017559	trub1	87	67.611	Ictalurus_punctatus
ENSMGAG00000011135	TRUB1	93	73.162	ENSSTOG00000003641	TRUB1	81	73.162	Ictidomys_tridecemlineatus
ENSMGAG00000011135	TRUB1	93	72.963	ENSJJAG00000011800	Trub1	79	72.963	Jaculus_jaculus
ENSMGAG00000011135	TRUB1	85	68.016	ENSKMAG00000006232	trub1	89	68.016	Kryptolebias_marmoratus
ENSMGAG00000011135	TRUB1	89	65.385	ENSLBEG00000026722	trub1	91	65.385	Labrus_bergylta
ENSMGAG00000011135	TRUB1	90	74.046	ENSLACG00000014885	TRUB1	88	74.046	Latimeria_chalumnae
ENSMGAG00000011135	TRUB1	91	69.318	ENSLOCG00000012979	trub1	90	69.318	Lepisosteus_oculatus
ENSMGAG00000011135	TRUB1	87	75.099	ENSLAFG00000015452	TRUB1	76	73.684	Loxodonta_africana
ENSMGAG00000011135	TRUB1	93	74.265	ENSMFAG00000031767	TRUB1	78	74.265	Macaca_fascicularis
ENSMGAG00000011135	TRUB1	93	74.265	ENSMMUG00000001902	TRUB1	78	74.265	Macaca_mulatta
ENSMGAG00000011135	TRUB1	93	69.853	ENSMNEG00000044646	TRUB1	77	69.853	Macaca_nemestrina
ENSMGAG00000011135	TRUB1	93	74.265	ENSMLEG00000042655	TRUB1	78	74.265	Mandrillus_leucophaeus
ENSMGAG00000011135	TRUB1	90	66.667	ENSMZEG00005024095	trub1	94	66.667	Maylandia_zebra
ENSMGAG00000011135	TRUB1	91	71.053	ENSMAUG00000011101	Trub1	81	71.168	Mesocricetus_auratus
ENSMGAG00000011135	TRUB1	93	73.897	ENSMICG00000016324	TRUB1	78	73.897	Microcebus_murinus
ENSMGAG00000011135	TRUB1	91	71.591	ENSMOCG00000017759	Trub1	82	71.691	Microtus_ochrogaster
ENSMGAG00000011135	TRUB1	93	77.778	ENSMODG00000009676	TRUB1	75	77.289	Monodelphis_domestica
ENSMGAG00000011135	TRUB1	91	71.429	MGP_CAROLIEiJ_G0023100	Trub1	80	71.481	Mus_caroli
ENSMGAG00000011135	TRUB1	91	70.677	ENSMUSG00000025086	Trub1	80	70.741	Mus_musculus
ENSMGAG00000011135	TRUB1	93	71.111	MGP_PahariEiJ_G0014588	Trub1	80	71.111	Mus_pahari
ENSMGAG00000011135	TRUB1	91	70.677	MGP_SPRETEiJ_G0024021	Trub1	80	70.741	Mus_spretus
ENSMGAG00000011135	TRUB1	93	74.265	ENSMPUG00000003556	TRUB1	78	74.265	Mustela_putorius_furo
ENSMGAG00000011135	TRUB1	93	74.265	ENSMLUG00000017686	TRUB1	80	74.265	Myotis_lucifugus
ENSMGAG00000011135	TRUB1	93	73.162	ENSNGAG00000018682	Trub1	78	73.162	Nannospalax_galili
ENSMGAG00000011135	TRUB1	85	68.826	ENSNBRG00000023393	trub1	88	68.826	Neolamprologus_brichardi
ENSMGAG00000011135	TRUB1	90	76.336	ENSNLEG00000016345	TRUB1	75	76.336	Nomascus_leucogenys
ENSMGAG00000011135	TRUB1	69	81.095	ENSMEUG00000006603	TRUB1	76	80.392	Notamacropus_eugenii
ENSMGAG00000011135	TRUB1	91	73.962	ENSOPRG00000009371	TRUB1	77	73.962	Ochotona_princeps
ENSMGAG00000011135	TRUB1	90	72.137	ENSODEG00000010854	TRUB1	75	72.137	Octodon_degus
ENSMGAG00000011135	TRUB1	90	66.284	ENSONIG00000007249	trub1	94	66.284	Oreochromis_niloticus
ENSMGAG00000011135	TRUB1	94	76.190	ENSOANG00000001556	TRUB1	90	76.190	Ornithorhynchus_anatinus
ENSMGAG00000011135	TRUB1	93	74.444	ENSOCUG00000009456	TRUB1	78	74.444	Oryctolagus_cuniculus
ENSMGAG00000011135	TRUB1	83	68.050	ENSORLG00000029719	trub1	86	68.050	Oryzias_latipes
ENSMGAG00000011135	TRUB1	83	67.635	ENSORLG00020016767	trub1	85	67.635	Oryzias_latipes_hni
ENSMGAG00000011135	TRUB1	83	68.050	ENSORLG00015014728	trub1	86	68.050	Oryzias_latipes_hsok
ENSMGAG00000011135	TRUB1	84	66.531	ENSOMEG00000014556	trub1	86	66.531	Oryzias_melastigma
ENSMGAG00000011135	TRUB1	93	74.265	ENSOGAG00000015895	TRUB1	78	74.265	Otolemur_garnettii
ENSMGAG00000011135	TRUB1	93	72.401	ENSOARG00000015591	TRUB1	79	72.401	Ovis_aries
ENSMGAG00000011135	TRUB1	90	76.336	ENSPPAG00000043645	TRUB1	75	76.336	Pan_paniscus
ENSMGAG00000011135	TRUB1	93	73.897	ENSPPRG00000007096	TRUB1	78	73.897	Panthera_pardus
ENSMGAG00000011135	TRUB1	93	74.265	ENSPTIG00000006378	TRUB1	78	74.265	Panthera_tigris_altaica
ENSMGAG00000011135	TRUB1	90	76.336	ENSPTRG00000002964	TRUB1	75	76.336	Pan_troglodytes
ENSMGAG00000011135	TRUB1	93	74.265	ENSPANG00000020712	TRUB1	78	74.265	Papio_anubis
ENSMGAG00000011135	TRUB1	58	67.665	ENSPKIG00000003852	trub1	72	67.665	Paramormyrops_kingsleyae
ENSMGAG00000011135	TRUB1	96	78.014	ENSPSIG00000012877	TRUB1	97	78.014	Pelodiscus_sinensis
ENSMGAG00000011135	TRUB1	87	65.217	ENSPMGG00000000075	trub1	91	65.217	Periophthalmus_magnuspinnatus
ENSMGAG00000011135	TRUB1	93	74.265	ENSPEMG00000011156	Trub1	80	74.265	Peromyscus_maniculatus_bairdii
ENSMGAG00000011135	TRUB1	93	77.778	ENSPCIG00000009729	TRUB1	76	75.986	Phascolarctos_cinereus
ENSMGAG00000011135	TRUB1	85	66.397	ENSPFOG00000009950	trub1	90	66.397	Poecilia_formosa
ENSMGAG00000011135	TRUB1	85	66.397	ENSPLAG00000013855	trub1	87	66.397	Poecilia_latipinna
ENSMGAG00000011135	TRUB1	85	66.397	ENSPMEG00000009064	trub1	89	66.397	Poecilia_mexicana
ENSMGAG00000011135	TRUB1	85	67.206	ENSPREG00000003343	trub1	89	67.206	Poecilia_reticulata
ENSMGAG00000011135	TRUB1	90	75.954	ENSPPYG00000002676	TRUB1	75	75.954	Pongo_abelii
ENSMGAG00000011135	TRUB1	92	65.056	ENSPCAG00000008427	TRUB1	76	65.056	Procavia_capensis
ENSMGAG00000011135	TRUB1	93	69.485	ENSPCOG00000024360	TRUB1	77	69.485	Propithecus_coquereli
ENSMGAG00000011135	TRUB1	70	77.833	ENSPVAG00000007575	TRUB1	77	77.833	Pteropus_vampyrus
ENSMGAG00000011135	TRUB1	90	66.667	ENSPNYG00000018614	trub1	94	66.667	Pundamilia_nyererei
ENSMGAG00000011135	TRUB1	89	56.757	ENSPNAG00000006881	trub1	84	56.757	Pygocentrus_nattereri
ENSMGAG00000011135	TRUB1	93	71.481	ENSRNOG00000017321	Trub1	79	71.481	Rattus_norvegicus
ENSMGAG00000011135	TRUB1	93	65.074	ENSRBIG00000033423	TRUB1	76	65.074	Rhinopithecus_bieti
ENSMGAG00000011135	TRUB1	93	74.265	ENSRROG00000033902	TRUB1	78	74.265	Rhinopithecus_roxellana
ENSMGAG00000011135	TRUB1	94	73.723	ENSSBOG00000024237	TRUB1	78	73.723	Saimiri_boliviensis_boliviensis
ENSMGAG00000011135	TRUB1	87	74.118	ENSSHAG00000009346	TRUB1	84	74.118	Sarcophilus_harrisii
ENSMGAG00000011135	TRUB1	87	68.340	ENSSFOG00015022124	trub1	88	68.340	Scleropages_formosus
ENSMGAG00000011135	TRUB1	85	68.016	ENSSMAG00000001020	trub1	88	68.016	Scophthalmus_maximus
ENSMGAG00000011135	TRUB1	82	68.201	ENSSDUG00000016414	trub1	89	68.016	Seriola_dumerili
ENSMGAG00000011135	TRUB1	82	68.619	ENSSLDG00000015486	trub1	89	68.421	Seriola_lalandi_dorsalis
ENSMGAG00000011135	TRUB1	94	80.147	ENSSPUG00000001642	TRUB1	94	80.147	Sphenodon_punctatus
ENSMGAG00000011135	TRUB1	85	68.421	ENSSPAG00000001217	trub1	89	68.421	Stegastes_partitus
ENSMGAG00000011135	TRUB1	93	73.333	ENSSSCG00000010653	TRUB1	79	73.333	Sus_scrofa
ENSMGAG00000011135	TRUB1	93	87.778	ENSTGUG00000010971	TRUB1	98	87.591	Taeniopygia_guttata
ENSMGAG00000011135	TRUB1	78	62.555	ENSTBEG00000002880	TRUB1	89	62.555	Tupaia_belangeri
ENSMGAG00000011135	TRUB1	70	77.833	ENSTTRG00000005767	TRUB1	77	77.833	Tursiops_truncatus
ENSMGAG00000011135	TRUB1	93	74.265	ENSUAMG00000024876	TRUB1	78	74.265	Ursus_americanus
ENSMGAG00000011135	TRUB1	93	74.632	ENSUMAG00000002411	TRUB1	81	74.632	Ursus_maritimus
ENSMGAG00000011135	TRUB1	93	75.368	ENSVPAG00000005507	TRUB1	78	75.368	Vicugna_pacos
ENSMGAG00000011135	TRUB1	93	74.265	ENSVVUG00000010085	TRUB1	66	74.265	Vulpes_vulpes
ENSMGAG00000011135	TRUB1	95	64.855	ENSXETG00000023828	trub1	100	64.855	Xenopus_tropicalis
ENSMGAG00000011135	TRUB1	84	65.854	ENSXCOG00000017847	trub1	87	65.854	Xiphophorus_couchianus
ENSMGAG00000011135	TRUB1	85	65.992	ENSXMAG00000014701	trub1	89	65.992	Xiphophorus_maculatus