EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000011573 (Gene tree)
Gene ID: 100549497
Gene Symbol: APAF1
Alias: APAF-1|CED4
Full Name: apoptotic peptidase activating factor 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 25424 bases
Position: chr1:47488017-47513440
Accession: 576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000012149	eIF2A	PF08662.11	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000013036	APAF1-201	3756	-	ENSMGAP00000012149	1252 (aa)	-	G1NGE2

Gene Model

Click here to download ENSMGAG00000011573's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp04115	p53 signaling pathway	KEGG
mgp04210	Apoptosis	KEGG
mgp05164	Influenza A	KEGG
mgp05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000011573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000011573	APAF1	51	33.171	ENSMGAG00000006913	WDR5B	89	33.171
ENSMGAG00000011573	APAF1	51	30.573	ENSMGAG00000001796	PRPF4	55	30.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000011573	APAF1	99	69.402	ENSCAFG00020023804	APAF1	100	69.402	Canis_lupus_dingo
ENSMGAG00000011573	APAF1	99	69.912	ENSCGRG00001019923	Apaf1	100	69.912	Cricetulus_griseus_chok1gshd
ENSMGAG00000011573	APAF1	99	71.030	ENSDNOG00000011420	APAF1	100	71.059	Dasypus_novemcinctus
ENSMGAG00000011573	APAF1	99	69.513	ENSJJAG00000014169	Apaf1	100	69.513	Jaculus_jaculus
ENSMGAG00000011573	APAF1	94	70.846	ENSPCAG00000005560	APAF1	94	70.846	Procavia_capensis
ENSMGAG00000011573	APAF1	99	88.782	ENSTGUG00000008761	APAF1	99	88.782	Taeniopygia_guttata
ENSMGAG00000011573	APAF1	99	68.102	ENSVVUG00000018651	APAF1	100	68.102	Vulpes_vulpes