EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000011658 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAL1
Alias: HARP|HHARP
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 35072 bases
Position: chr7:24566005-24601076
Accession: 11102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000012216	ResIII	PF04851.15	6.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000013103	SMARCAL1-201	2829	-	ENSMGAP00000012216	943 (aa)	-	G1NGJ4

Gene Model

Click here to download ENSMGAG00000011658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000011658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000011658	SMARCAL1	99	56.358	ENSG00000138375	SMARCAL1	99	69.375	Homo_sapiens
ENSMGAG00000011658	SMARCAL1	96	54.775	ENSAPOG00000020156	SMARCAL1	96	54.857	Acanthochromis_polyacanthus
ENSMGAG00000011658	SMARCAL1	77	62.794	ENSACIG00000001500	smarcal1	91	62.794	Amphilophus_citrinellus
ENSMGAG00000011658	SMARCAL1	96	55.434	ENSAOCG00000014266	SMARCAL1	98	55.188	Amphiprion_ocellaris
ENSMGAG00000011658	SMARCAL1	88	66.359	ENSAPEG00000015861	SMARCAL1	96	66.359	Amphiprion_percula
ENSMGAG00000011658	SMARCAL1	96	54.723	ENSATEG00000020624	SMARCAL1	97	54.723	Anabas_testudineus
ENSMGAG00000011658	SMARCAL1	99	81.921	ENSAPLG00000009864	SMARCAL1	99	82.025	Anas_platyrhynchos
ENSMGAG00000011658	SMARCAL1	99	59.661	ENSACAG00000004612	SMARCAL1	99	59.540	Anolis_carolinensis
ENSMGAG00000011658	SMARCAL1	96	55.373	ENSACLG00000015990	SMARCAL1	97	55.531	Astatotilapia_calliptera
ENSMGAG00000011658	SMARCAL1	99	53.879	ENSAMXG00000003350	smarcal1	99	53.879	Astyanax_mexicanus
ENSMGAG00000011658	SMARCAL1	99	68.913	ENSCPBG00000013599	SMARCAL1	99	68.913	Chrysemys_picta_bellii
ENSMGAG00000011658	SMARCAL1	73	49.139	ENSCING00000009308	-	99	49.139	Ciona_intestinalis
ENSMGAG00000011658	SMARCAL1	96	53.846	ENSCSEG00000010785	SMARCAL1	99	53.653	Cynoglossus_semilaevis
ENSMGAG00000011658	SMARCAL1	96	54.144	ENSCVAG00000018780	SMARCAL1	96	54.365	Cyprinodon_variegatus
ENSMGAG00000011658	SMARCAL1	57	55.000	ENSEBUG00000011906	SMARCAL1	75	55.000	Eptatretus_burgeri
ENSMGAG00000011658	SMARCAL1	72	64.474	ENSELUG00000010440	-	76	60.590	Esox_lucius
ENSMGAG00000011658	SMARCAL1	99	76.836	ENSFALG00000003981	SMARCAL1	99	76.836	Ficedula_albicollis
ENSMGAG00000011658	SMARCAL1	96	52.928	ENSFHEG00000008380	SMARCAL1	96	53.282	Fundulus_heteroclitus
ENSMGAG00000011658	SMARCAL1	52	63.507	ENSGMOG00000010034	smarcal1	86	63.507	Gadus_morhua
ENSMGAG00000011658	SMARCAL1	99	91.624	ENSGALG00000011475	RPL37A	100	91.624	Gallus_gallus
ENSMGAG00000011658	SMARCAL1	64	66.729	ENSGACG00000006073	SMARCAL1	100	67.970	Gasterosteus_aculeatus
ENSMGAG00000011658	SMARCAL1	92	67.780	ENSGAGG00000015660	SMARCAL1	99	67.780	Gopherus_agassizii
ENSMGAG00000011658	SMARCAL1	96	55.604	ENSHBUG00000002973	smarcal1	97	55.022	Haplochromis_burtoni
ENSMGAG00000011658	SMARCAL1	78	59.730	ENSHCOG00000017921	smarcal1	87	59.730	Hippocampus_comes
ENSMGAG00000011658	SMARCAL1	90	53.636	ENSLBEG00000003493	smarcal1	99	53.750	Labrus_bergylta
ENSMGAG00000011658	SMARCAL1	75	59.494	ENSLBEG00000022915	smarcal1	92	59.494	Labrus_bergylta
ENSMGAG00000011658	SMARCAL1	99	55.176	ENSLACG00000010974	SMARCAL1	99	54.912	Latimeria_chalumnae
ENSMGAG00000011658	SMARCAL1	76	66.567	ENSLOCG00000009637	smarcal1	86	66.567	Lepisosteus_oculatus
ENSMGAG00000011658	SMARCAL1	96	55.275	ENSMAMG00000000828	SMARCAL1	98	55.165	Mastacembelus_armatus
ENSMGAG00000011658	SMARCAL1	96	55.263	ENSMZEG00005007660	SMARCAL1	97	55.422	Maylandia_zebra
ENSMGAG00000011658	SMARCAL1	78	56.757	ENSMMOG00000003842	smarcal1	91	56.622	Mola_mola
ENSMGAG00000011658	SMARCAL1	99	56.173	ENSMODG00000015544	SMARCAL1	99	56.173	Monodelphis_domestica
ENSMGAG00000011658	SMARCAL1	71	64.978	ENSNBRG00000016273	smarcal1	86	64.978	Neolamprologus_brichardi
ENSMGAG00000011658	SMARCAL1	92	58.343	ENSMEUG00000004395	SMARCAL1	100	58.296	Notamacropus_eugenii
ENSMGAG00000011658	SMARCAL1	96	55.373	ENSONIG00000009036	smarcal1	99	65.345	Oreochromis_niloticus
ENSMGAG00000011658	SMARCAL1	96	54.125	ENSORLG00000016455	SMARCAL1	96	54.125	Oryzias_latipes
ENSMGAG00000011658	SMARCAL1	96	54.235	ENSORLG00020001610	SMARCAL1	96	54.235	Oryzias_latipes_hni
ENSMGAG00000011658	SMARCAL1	96	54.125	ENSORLG00015001865	SMARCAL1	96	54.125	Oryzias_latipes_hsok
ENSMGAG00000011658	SMARCAL1	96	53.532	ENSOMEG00000001845	smarcal1	96	53.532	Oryzias_melastigma
ENSMGAG00000011658	SMARCAL1	79	58.777	ENSPMGG00000019092	SMARCAL1	97	52.122	Periophthalmus_magnuspinnatus
ENSMGAG00000011658	SMARCAL1	99	55.422	ENSPCIG00000022514	SMARCAL1	99	56.508	Phascolarctos_cinereus
ENSMGAG00000011658	SMARCAL1	96	54.636	ENSPFOG00000000560	SMARCAL1	96	55.116	Poecilia_formosa
ENSMGAG00000011658	SMARCAL1	96	54.636	ENSPMEG00000018146	SMARCAL1	96	55.226	Poecilia_mexicana
ENSMGAG00000011658	SMARCAL1	62	68.981	ENSPREG00000009591	SMARCAL1	99	68.981	Poecilia_reticulata
ENSMGAG00000011658	SMARCAL1	77	64.973	ENSPNAG00000014900	smarcal1	81	79.310	Pygocentrus_nattereri
ENSMGAG00000011658	SMARCAL1	99	54.592	ENSSHAG00000013538	SMARCAL1	99	54.386	Sarcophilus_harrisii
ENSMGAG00000011658	SMARCAL1	96	54.081	ENSSMAG00000010427	SMARCAL1	96	54.081	Scophthalmus_maximus
ENSMGAG00000011658	SMARCAL1	96	54.167	ENSSDUG00000017470	SMARCAL1	94	54.167	Seriola_dumerili
ENSMGAG00000011658	SMARCAL1	96	54.022	ENSSLDG00000007224	SMARCAL1	96	54.022	Seriola_lalandi_dorsalis
ENSMGAG00000011658	SMARCAL1	99	63.819	ENSSPUG00000015369	SMARCAL1	99	63.828	Sphenodon_punctatus
ENSMGAG00000011658	SMARCAL1	69	65.344	ENSSPAG00000003742	smarcal1	89	62.181	Stegastes_partitus
ENSMGAG00000011658	SMARCAL1	73	63.610	ENSSSCG00000035501	SMARCAL1	76	63.808	Sus_scrofa
ENSMGAG00000011658	SMARCAL1	73	82.673	ENSTGUG00000005079	SMARCAL1	100	82.673	Taeniopygia_guttata
ENSMGAG00000011658	SMARCAL1	97	49.565	ENSTRUG00000010701	SMARCAL1	98	49.674	Takifugu_rubripes
ENSMGAG00000011658	SMARCAL1	99	49.177	ENSTTRG00000009001	SMARCAL1	99	49.177	Tursiops_truncatus
ENSMGAG00000011658	SMARCAL1	99	60.669	ENSXETG00000000465	smarcal1	99	60.565	Xenopus_tropicalis