EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000011888 (Gene tree)
Gene ID: 100549826
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 14653 bases
Position: chr5:29299796-29314448
Accession: 100549826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000012474	RRM_1	PF00076.22	8.4e-34	1	2
ENSMGAP00000012474	RRM_1	PF00076.22	8.4e-34	2	2
ENSMGAP00000018804	RRM_1	PF00076.22	2.6e-29	1	2
ENSMGAP00000018804	RRM_1	PF00076.22	2.6e-29	2	2
ENSMGAP00000012474	RRM_3	PF08777.11	2.9e-08	1	1
ENSMGAP00000018804	RRM_3	PF08777.11	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000013368	-	824	-	ENSMGAP00000012474	269 (aa)	-	G1NH50
ENSMGAT00000020217	-	2087	XM_003206496	ENSMGAP00000018804	164 (aa)	XP_003206544	G3USX0

Gene Model

Click here to download ENSMGAG00000011888's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG
mgp05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000011888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000011888	-	73	65.574	ENSMGAG00000011835	SRSF5	67	67.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000011888	-	96	73.494	ENSAPOG00000017395	srsf5a	67	76.263	Acanthochromis_polyacanthus
ENSMGAG00000011888	-	96	73.964	ENSACIG00000011892	srsf5a	96	71.642	Amphilophus_citrinellus
ENSMGAG00000011888	-	96	74.545	ENSAOCG00000014967	srsf5a	65	76.020	Amphiprion_ocellaris
ENSMGAG00000011888	-	96	74.545	ENSAPEG00000009297	srsf5a	65	76.020	Amphiprion_percula
ENSMGAG00000011888	-	96	75.740	ENSATEG00000000198	srsf5a	70	75.124	Anabas_testudineus
ENSMGAG00000011888	-	96	96.273	ENSAPLG00000002469	-	100	92.251	Anas_platyrhynchos
ENSMGAG00000011888	-	96	83.125	ENSACAG00000029015	-	73	82.723	Anolis_carolinensis
ENSMGAG00000011888	-	96	71.676	ENSACLG00000027166	srsf5a	73	70.642	Astatotilapia_calliptera
ENSMGAG00000011888	-	96	76.190	ENSAMXG00000030476	srsf5a	72	77.387	Astyanax_mexicanus
ENSMGAG00000011888	-	96	86.957	ENSCPBG00000021518	-	89	79.098	Chrysemys_picta_bellii
ENSMGAG00000011888	-	96	52.809	ENSCSAVG00000011376	-	83	54.545	Ciona_savignyi
ENSMGAG00000011888	-	96	72.000	ENSCSEG00000008109	srsf5a	64	72.059	Cynoglossus_semilaevis
ENSMGAG00000011888	-	94	65.497	ENSCVAG00000016982	srsf5a	97	64.179	Cyprinodon_variegatus
ENSMGAG00000011888	-	96	76.048	ENSDARG00000029818	srsf5a	100	73.684	Danio_rerio
ENSMGAG00000011888	-	96	74.286	ENSELUG00000020439	srsf5a	66	73.430	Esox_lucius
ENSMGAG00000011888	-	96	98.734	ENSFALG00000005098	-	90	91.968	Ficedula_albicollis
ENSMGAG00000011888	-	96	71.338	ENSFHEG00000003955	srsf5a	98	61.644	Fundulus_heteroclitus
ENSMGAG00000011888	-	96	77.987	ENSGMOG00000000869	srsf5a	100	76.190	Gadus_morhua
ENSMGAG00000011888	-	96	100.000	ENSGALG00000033259	SRSF5A	90	95.600	Gallus_gallus
ENSMGAG00000011888	-	96	70.064	ENSGAFG00000018237	srsf5a	58	70.213	Gambusia_affinis
ENSMGAG00000011888	-	96	78.750	ENSGACG00000011761	srsf5a	75	75.521	Gasterosteus_aculeatus
ENSMGAG00000011888	-	96	86.957	ENSGAGG00000007312	-	89	78.689	Gopherus_agassizii
ENSMGAG00000011888	-	96	72.093	ENSHBUG00000014048	srsf5a	73	70.968	Haplochromis_burtoni
ENSMGAG00000011888	-	96	74.405	ENSHCOG00000017557	srsf5a	89	61.993	Hippocampus_comes
ENSMGAG00000011888	-	96	72.254	ENSIPUG00000003439	srsf5a	73	74.020	Ictalurus_punctatus
ENSMGAG00000011888	-	96	70.000	ENSKMAG00000014937	srsf5a	75	65.574	Kryptolebias_marmoratus
ENSMGAG00000011888	-	96	69.492	ENSLBEG00000017153	srsf5a	77	69.756	Labrus_bergylta
ENSMGAG00000011888	-	96	80.247	ENSLACG00000017874	-	74	78.238	Latimeria_chalumnae
ENSMGAG00000011888	-	96	77.844	ENSLOCG00000014075	srsf5a	65	78.283	Lepisosteus_oculatus
ENSMGAG00000011888	-	96	76.687	ENSMAMG00000000192	srsf5a	70	76.410	Mastacembelus_armatus
ENSMGAG00000011888	-	96	72.093	ENSMZEG00005010485	srsf5a	73	70.968	Maylandia_zebra
ENSMGAG00000011888	-	96	79.630	ENSMMOG00000009793	srsf5a	66	77.835	Mola_mola
ENSMGAG00000011888	-	96	78.344	ENSMALG00000021194	srsf5a	68	75.132	Monopterus_albus
ENSMGAG00000011888	-	96	72.515	ENSNBRG00000000771	srsf5a	73	71.296	Neolamprologus_brichardi
ENSMGAG00000011888	-	96	72.515	ENSONIG00000019583	srsf5a	73	71.296	Oreochromis_niloticus
ENSMGAG00000011888	-	96	75.460	ENSORLG00000009268	srsf5a	70	74.479	Oryzias_latipes
ENSMGAG00000011888	-	96	75.460	ENSORLG00020003281	srsf5	70	74.479	Oryzias_latipes_hni
ENSMGAG00000011888	-	96	75.460	ENSORLG00015023075	srsf5	70	74.479	Oryzias_latipes_hsok
ENSMGAG00000011888	-	96	77.160	ENSOMEG00000000628	srsf5a	70	77.487	Oryzias_melastigma
ENSMGAG00000011888	-	96	75.000	ENSPKIG00000002054	srsf5a	72	75.879	Paramormyrops_kingsleyae
ENSMGAG00000011888	-	96	89.308	ENSPSIG00000008238	-	89	79.918	Pelodiscus_sinensis
ENSMGAG00000011888	-	96	74.545	ENSPMGG00000020125	srsf5a	59	73.604	Periophthalmus_magnuspinnatus
ENSMGAG00000011888	-	96	69.364	ENSPFOG00000022993	srsf5a	63	69.118	Poecilia_formosa
ENSMGAG00000011888	-	95	69.186	ENSPLAG00000005508	srsf5a	63	68.966	Poecilia_latipinna
ENSMGAG00000011888	-	96	69.364	ENSPMEG00000016339	srsf5a	63	69.118	Poecilia_mexicana
ENSMGAG00000011888	-	96	68.966	ENSPREG00000018091	srsf5a	64	68.780	Poecilia_reticulata
ENSMGAG00000011888	-	96	72.093	ENSPNYG00000021245	srsf5a	73	70.968	Pundamilia_nyererei
ENSMGAG00000011888	-	96	75.449	ENSPNAG00000021333	srsf5a	70	76.768	Pygocentrus_nattereri
ENSMGAG00000011888	-	96	77.381	ENSSFOG00015008377	srsf5	70	76.382	Scleropages_formosus
ENSMGAG00000011888	-	96	69.780	ENSSMAG00000010899	srsf5a	97	53.378	Scophthalmus_maximus
ENSMGAG00000011888	-	96	73.780	ENSSDUG00000006103	srsf5a	68	77.041	Seriola_dumerili
ENSMGAG00000011888	-	96	73.780	ENSSLDG00000004146	srsf5a	65	76.410	Seriola_lalandi_dorsalis
ENSMGAG00000011888	-	96	85.000	ENSSPUG00000002052	-	73	81.675	Sphenodon_punctatus
ENSMGAG00000011888	-	96	74.545	ENSSPAG00000002821	srsf5a	68	76.650	Stegastes_partitus
ENSMGAG00000011888	-	96	97.484	ENSTGUG00000011492	-	72	96.791	Taeniopygia_guttata
ENSMGAG00000011888	-	98	72.881	ENSTRUG00000022908	srsf5a	69	72.816	Takifugu_rubripes
ENSMGAG00000011888	-	96	76.471	ENSXETG00000017937	srsf5a	76	75.622	Xenopus_tropicalis
ENSMGAG00000011888	-	96	71.006	ENSXCOG00000015338	srsf5a	65	69.500	Xiphophorus_couchianus
ENSMGAG00000011888	-	96	68.571	ENSXMAG00000012823	srsf5a	65	68.447	Xiphophorus_maculatus