EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000012024 (Gene tree)
Gene ID: 100544281
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 58797 bases
Position: chr3:76767093-76825889
Accession: 100544281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000012625	ResIII	PF04851.15	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000013521	-	3378	XM_003205181	ENSMGAP00000012625	918 (aa)	XP_003205229	G1NHG9

Gene Model

Click here to download ENSMGAG00000012024's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000012024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000012024	-	64	30.964	ENSMGAG00000003517	SMARCA5	53	30.912
ENSMGAG00000012024	-	55	31.907	ENSMGAG00000014304	CHD1L	54	31.907
ENSMGAG00000012024	-	55	32.163	ENSMGAG00000005577	SMARCAD1	53	32.453
ENSMGAG00000012024	-	71	42.687	ENSMGAG00000010634	RAD54L	85	42.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000012024	-	79	74.038	ENSG00000265817	FSBP	100	74.038	Homo_sapiens
ENSMGAG00000012024	-	99	68.495	ENSG00000197275	RAD54B	100	68.495	Homo_sapiens
ENSMGAG00000012024	-	99	67.538	ENSAMEG00000005834	-	99	67.538	Ailuropoda_melanoleuca
ENSMGAG00000012024	-	99	56.769	ENSACIG00000013005	rad54b	99	56.769	Amphilophus_citrinellus
ENSMGAG00000012024	-	99	56.728	ENSAOCG00000008523	rad54b	99	56.728	Amphiprion_ocellaris
ENSMGAG00000012024	-	99	55.834	ENSAPEG00000001673	rad54b	99	55.895	Amphiprion_percula
ENSMGAG00000012024	-	99	56.598	ENSATEG00000001527	rad54b	99	56.598	Anabas_testudineus
ENSMGAG00000012024	-	100	89.760	ENSAPLG00000014366	-	100	89.760	Anas_platyrhynchos
ENSMGAG00000012024	-	87	75.469	ENSACAG00000003671	-	99	75.469	Anolis_carolinensis
ENSMGAG00000012024	-	71	74.730	ENSANAG00000019528	-	100	74.730	Aotus_nancymaae
ENSMGAG00000012024	-	99	56.291	ENSACLG00000007826	rad54b	99	56.352	Astatotilapia_calliptera
ENSMGAG00000012024	-	85	60.683	ENSAMXG00000039985	rad54b	94	60.553	Astyanax_mexicanus
ENSMGAG00000012024	-	99	66.667	ENSBTAG00000000632	RAD54B	99	66.667	Bos_taurus
ENSMGAG00000012024	-	79	35.433	WBGene00013792	Y116A8C.13	83	34.908	Caenorhabditis_elegans
ENSMGAG00000012024	-	99	68.065	ENSCJAG00000000080	-	100	73.901	Callithrix_jacchus
ENSMGAG00000012024	-	99	67.869	ENSCAFG00000009179	RAD54B	99	67.869	Canis_familiaris
ENSMGAG00000012024	-	99	67.760	ENSCAFG00020012084	-	99	67.760	Canis_lupus_dingo
ENSMGAG00000012024	-	99	66.343	ENSCHIG00000008230	-	99	66.343	Capra_hircus
ENSMGAG00000012024	-	99	68.295	ENSTSYG00000013234	-	99	68.295	Carlito_syrichta
ENSMGAG00000012024	-	100	67.389	ENSCPOG00000011643	-	100	67.389	Cavia_porcellus
ENSMGAG00000012024	-	99	68.256	ENSCCAG00000011754	-	100	73.901	Cebus_capucinus
ENSMGAG00000012024	-	99	68.404	ENSCATG00000030661	-	100	73.626	Cercocebus_atys
ENSMGAG00000012024	-	99	67.176	ENSCLAG00000010476	-	100	67.176	Chinchilla_lanigera
ENSMGAG00000012024	-	99	68.512	ENSCSAG00000012712	-	100	68.512	Chlorocebus_sabaeus
ENSMGAG00000012024	-	99	78.827	ENSCPBG00000003204	-	99	79.294	Chrysemys_picta_bellii
ENSMGAG00000012024	-	99	68.404	ENSCANG00000017939	-	100	73.764	Colobus_angolensis_palliatus
ENSMGAG00000012024	-	99	65.936	ENSCGRG00001020184	Rad54b	99	65.936	Cricetulus_griseus_chok1gshd
ENSMGAG00000012024	-	99	65.246	ENSCGRG00000016752	Rad54b	99	65.246	Cricetulus_griseus_crigri
ENSMGAG00000012024	-	88	59.804	ENSCSEG00000001601	rad54b	95	59.804	Cynoglossus_semilaevis
ENSMGAG00000012024	-	99	58.170	ENSCVAG00000009200	rad54b	99	58.388	Cyprinodon_variegatus
ENSMGAG00000012024	-	99	55.195	ENSDARG00000092134	rad54b	99	61.860	Danio_rerio
ENSMGAG00000012024	-	99	68.000	ENSDNOG00000015535	-	99	68.000	Dasypus_novemcinctus
ENSMGAG00000012024	-	99	67.325	ENSDORG00000002492	Rad54b	99	67.325	Dipodomys_ordii
ENSMGAG00000012024	-	87	66.500	ENSETEG00000010605	-	100	66.500	Echinops_telfairi
ENSMGAG00000012024	-	99	46.372	ENSEBUG00000009104	rad54b	99	46.162	Eptatretus_burgeri
ENSMGAG00000012024	-	96	67.117	ENSEASG00005004021	-	99	67.117	Equus_asinus_asinus
ENSMGAG00000012024	-	99	66.882	ENSECAG00000021949	-	95	71.324	Equus_caballus
ENSMGAG00000012024	-	74	78.571	ENSEEUG00000008056	-	75	78.571	Erinaceus_europaeus
ENSMGAG00000012024	-	99	54.034	ENSELUG00000009287	rad54b	99	54.034	Esox_lucius
ENSMGAG00000012024	-	99	67.869	ENSFCAG00000015513	-	99	73.691	Felis_catus
ENSMGAG00000012024	-	99	86.026	ENSFALG00000005467	-	99	86.026	Ficedula_albicollis
ENSMGAG00000012024	-	99	68.087	ENSFDAG00000020541	-	100	68.087	Fukomys_damarensis
ENSMGAG00000012024	-	86	60.530	ENSFHEG00000014382	rad54b	86	60.530	Fundulus_heteroclitus
ENSMGAG00000012024	-	85	60.354	ENSGMOG00000014774	rad54b	98	60.354	Gadus_morhua
ENSMGAG00000012024	-	100	95.207	ENSGALG00000043597	RAD54B	100	95.207	Gallus_gallus
ENSMGAG00000012024	-	100	57.143	ENSGAFG00000007901	rad54b	100	57.143	Gambusia_affinis
ENSMGAG00000012024	-	99	56.377	ENSGACG00000009128	rad54b	100	56.377	Gasterosteus_aculeatus
ENSMGAG00000012024	-	99	78.936	ENSGAGG00000018747	-	99	78.936	Gopherus_agassizii
ENSMGAG00000012024	-	99	68.852	ENSGGOG00000023516	-	99	68.852	Gorilla_gorilla
ENSMGAG00000012024	-	99	56.197	ENSHBUG00000016017	rad54b	99	56.197	Haplochromis_burtoni
ENSMGAG00000012024	-	99	67.429	ENSHGLG00000008263	RAD54B	99	67.429	Heterocephalus_glaber_female
ENSMGAG00000012024	-	99	66.667	ENSHGLG00100008108	-	99	66.667	Heterocephalus_glaber_male
ENSMGAG00000012024	-	99	54.292	ENSHCOG00000004764	rad54b	98	57.934	Hippocampus_comes
ENSMGAG00000012024	-	99	54.450	ENSIPUG00000018531	rad54b	99	54.450	Ictalurus_punctatus
ENSMGAG00000012024	-	99	65.693	ENSSTOG00000010791	-	99	65.693	Ictidomys_tridecemlineatus
ENSMGAG00000012024	-	99	66.991	ENSJJAG00000010314	Rad54b	99	66.991	Jaculus_jaculus
ENSMGAG00000012024	-	85	60.453	ENSKMAG00000004744	rad54b	91	60.453	Kryptolebias_marmoratus
ENSMGAG00000012024	-	90	72.308	ENSLACG00000000859	-	100	70.306	Latimeria_chalumnae
ENSMGAG00000012024	-	99	60.684	ENSLOCG00000010100	rad54b	94	66.750	Lepisosteus_oculatus
ENSMGAG00000012024	-	86	71.537	ENSLAFG00000015315	-	98	71.537	Loxodonta_africana
ENSMGAG00000012024	-	99	68.295	ENSMFAG00000031629	-	100	73.489	Macaca_fascicularis
ENSMGAG00000012024	-	99	68.295	ENSMMUG00000005659	-	100	68.295	Macaca_mulatta
ENSMGAG00000012024	-	99	67.970	ENSMNEG00000016408	-	100	67.970	Macaca_nemestrina
ENSMGAG00000012024	-	99	68.404	ENSMLEG00000006946	-	100	68.404	Mandrillus_leucophaeus
ENSMGAG00000012024	-	99	57.251	ENSMAMG00000012269	rad54b	99	57.313	Mastacembelus_armatus
ENSMGAG00000012024	-	99	56.090	ENSMZEG00005005281	rad54b	97	60.442	Maylandia_zebra
ENSMGAG00000012024	-	99	67.251	ENSMAUG00000013586	Rad54b	99	67.251	Mesocricetus_auratus
ENSMGAG00000012024	-	89	71.902	ENSMICG00000000754	-	92	71.902	Microcebus_murinus
ENSMGAG00000012024	-	100	64.527	ENSMOCG00000020035	Rad54b	100	64.527	Microtus_ochrogaster
ENSMGAG00000012024	-	87	60.099	ENSMMOG00000003394	rad54b	91	60.099	Mola_mola
ENSMGAG00000012024	-	88	73.043	ENSMODG00000007343	-	99	73.043	Monodelphis_domestica
ENSMGAG00000012024	-	70	60.930	ENSMALG00000001520	rad54b	99	61.502	Monopterus_albus
ENSMGAG00000012024	-	99	65.827	MGP_CAROLIEiJ_G0025810	Rad54b	99	65.827	Mus_caroli
ENSMGAG00000012024	-	99	65.536	ENSMUSG00000078773	Rad54b	99	65.536	Mus_musculus
ENSMGAG00000012024	-	99	65.864	MGP_PahariEiJ_G0023933	Rad54b	99	65.864	Mus_pahari
ENSMGAG00000012024	-	99	65.974	MGP_SPRETEiJ_G0026758	Rad54b	99	65.974	Mus_spretus
ENSMGAG00000012024	-	89	71.883	ENSMPUG00000008878	-	99	71.883	Mustela_putorius_furo
ENSMGAG00000012024	-	99	68.381	ENSMLUG00000008953	-	99	68.381	Myotis_lucifugus
ENSMGAG00000012024	-	99	66.847	ENSNGAG00000017537	Rad54b	99	66.847	Nannospalax_galili
ENSMGAG00000012024	-	99	56.616	ENSNBRG00000013394	rad54b	99	56.678	Neolamprologus_brichardi
ENSMGAG00000012024	-	100	67.861	ENSNLEG00000003062	-	100	73.663	Nomascus_leucogenys
ENSMGAG00000012024	-	70	70.792	ENSMEUG00000012426	-	71	70.792	Notamacropus_eugenii
ENSMGAG00000012024	-	99	66.703	ENSODEG00000019564	-	99	66.703	Octodon_degus
ENSMGAG00000012024	-	80	75.296	ENSODEG00000002650	-	99	75.296	Octodon_degus
ENSMGAG00000012024	-	99	58.145	ENSONIG00000006067	rad54b	99	58.145	Oreochromis_niloticus
ENSMGAG00000012024	-	82	76.101	ENSOANG00000011348	-	99	76.101	Ornithorhynchus_anatinus
ENSMGAG00000012024	-	99	66.594	ENSOCUG00000016478	-	99	66.594	Oryctolagus_cuniculus
ENSMGAG00000012024	-	99	55.544	ENSORLG00000008918	rad54b	99	64.275	Oryzias_latipes
ENSMGAG00000012024	-	69	64.119	ENSORLG00020012171	rad54b	99	64.119	Oryzias_latipes_hni
ENSMGAG00000012024	-	99	55.439	ENSORLG00015018536	rad54b	99	55.439	Oryzias_latipes_hsok
ENSMGAG00000012024	-	83	61.469	ENSOMEG00000004345	rad54b	99	61.469	Oryzias_melastigma
ENSMGAG00000012024	-	99	66.703	ENSOGAG00000007854	-	99	66.703	Otolemur_garnettii
ENSMGAG00000012024	-	89	70.889	ENSOARG00000007691	-	99	70.889	Ovis_aries
ENSMGAG00000012024	-	99	67.204	ENSPPAG00000029572	-	100	67.204	Pan_paniscus
ENSMGAG00000012024	-	99	67.760	ENSPPRG00000007571	-	99	73.554	Panthera_pardus
ENSMGAG00000012024	-	79	73.967	ENSPTIG00000012670	-	99	73.967	Panthera_tigris_altaica
ENSMGAG00000012024	-	99	68.387	ENSPTRG00000020427	-	100	73.901	Pan_troglodytes
ENSMGAG00000012024	-	99	68.404	ENSPANG00000019566	-	100	68.404	Papio_anubis
ENSMGAG00000012024	-	99	58.773	ENSPKIG00000014974	rad54b	99	58.773	Paramormyrops_kingsleyae
ENSMGAG00000012024	-	99	75.679	ENSPSIG00000002383	-	100	79.319	Pelodiscus_sinensis
ENSMGAG00000012024	-	99	66.484	ENSPEMG00000012133	Rad54b	99	66.484	Peromyscus_maniculatus_bairdii
ENSMGAG00000012024	-	86	59.625	ENSPMAG00000002916	rad54b	99	59.750	Petromyzon_marinus
ENSMGAG00000012024	-	87	73.940	ENSPCIG00000020151	-	94	73.234	Phascolarctos_cinereus
ENSMGAG00000012024	-	100	56.653	ENSPFOG00000023411	rad54b	100	56.757	Poecilia_formosa
ENSMGAG00000012024	-	100	56.653	ENSPLAG00000010430	rad54b	100	56.757	Poecilia_latipinna
ENSMGAG00000012024	-	100	56.549	ENSPMEG00000016873	rad54b	97	60.990	Poecilia_mexicana
ENSMGAG00000012024	-	100	57.251	ENSPREG00000018443	rad54b	100	57.251	Poecilia_reticulata
ENSMGAG00000012024	-	99	68.364	ENSPPYG00000018750	-	100	68.364	Pongo_abelii
ENSMGAG00000012024	-	99	67.795	ENSPCOG00000026845	-	99	73.306	Propithecus_coquereli
ENSMGAG00000012024	-	81	73.217	ENSPVAG00000000261	-	86	73.217	Pteropus_vampyrus
ENSMGAG00000012024	-	85	61.548	ENSPNYG00000018303	rad54b	95	61.548	Pundamilia_nyererei
ENSMGAG00000012024	-	89	73.333	ENSPNAG00000000295	rad54b	97	73.333	Pygocentrus_nattereri
ENSMGAG00000012024	-	99	65.317	ENSRNOG00000039949	Rad54b	99	65.317	Rattus_norvegicus
ENSMGAG00000012024	-	99	68.147	ENSRBIG00000020419	-	100	68.147	Rhinopithecus_bieti
ENSMGAG00000012024	-	99	68.039	ENSRROG00000039897	-	100	68.078	Rhinopithecus_roxellana
ENSMGAG00000012024	-	85	35.860	YBR073W	RDH54	88	36.384	Saccharomyces_cerevisiae
ENSMGAG00000012024	-	99	67.861	ENSSBOG00000028501	-	100	67.861	Saimiri_boliviensis_boliviensis
ENSMGAG00000012024	-	99	68.472	ENSSHAG00000017038	-	99	68.472	Sarcophilus_harrisii
ENSMGAG00000012024	-	62	68.596	ENSSFOG00015008483	rad54b	88	68.596	Scleropages_formosus
ENSMGAG00000012024	-	99	56.316	ENSSMAG00000018659	rad54b	99	57.267	Scophthalmus_maximus
ENSMGAG00000012024	-	97	56.559	ENSSDUG00000001122	rad54b	97	56.559	Seriola_dumerili
ENSMGAG00000012024	-	99	55.929	ENSSLDG00000013787	rad54b	99	55.929	Seriola_lalandi_dorsalis
ENSMGAG00000012024	-	100	75.272	ENSSPUG00000016497	-	100	75.272	Sphenodon_punctatus
ENSMGAG00000012024	-	99	56.616	ENSSPAG00000012800	rad54b	99	56.616	Stegastes_partitus
ENSMGAG00000012024	-	99	67.606	ENSSSCG00000006101	-	99	73.592	Sus_scrofa
ENSMGAG00000012024	-	99	85.403	ENSTGUG00000011880	-	100	85.403	Taeniopygia_guttata
ENSMGAG00000012024	-	90	59.304	ENSTRUG00000010015	rad54b	99	55.508	Takifugu_rubripes
ENSMGAG00000012024	-	99	63.983	ENSTTRG00000006312	-	99	63.983	Tursiops_truncatus
ENSMGAG00000012024	-	99	67.865	ENSUMAG00000016401	-	99	67.865	Ursus_maritimus
ENSMGAG00000012024	-	99	66.812	ENSVPAG00000003157	-	99	66.812	Vicugna_pacos
ENSMGAG00000012024	-	99	56.000	ENSXETG00000025924	rad54b	99	59.623	Xenopus_tropicalis
ENSMGAG00000012024	-	100	56.757	ENSXMAG00000013141	rad54b	100	56.757	Xiphophorus_maculatus