EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000012146 (Gene tree)
Gene ID: 100544942
Gene Symbol: XRCC6
Alias: D22S671|D22S731|G22P1|KU70|ML8
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 12973 bases
Position: chr1:51851049-51864021
Accession: 4055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000018454	SAP	PF02037.27	1.2e-10	1	1
ENSMGAP00000012764	SAP	PF02037.27	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000013662	XRCC6-202	1959	-	ENSMGAP00000012764	621 (aa)	-	G1NHT5
ENSMGAT00000018328	XRCC6-201	1965	-	ENSMGAP00000018454	619 (aa)	-	G3URY6

Gene Model

Click here to download ENSMGAG00000012146's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000012146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000012146	XRCC6	99	69.331	ENSG00000196419	XRCC6	99	69.494	Homo_sapiens
ENSMGAG00000012146	XRCC6	98	58.075	ENSAPOG00000012704	xrcc6	99	57.912	Acanthochromis_polyacanthus
ENSMGAG00000012146	XRCC6	98	59.641	ENSACIG00000021277	xrcc6	99	59.477	Amphilophus_citrinellus
ENSMGAG00000012146	XRCC6	99	58.469	ENSAOCG00000021344	xrcc6	99	58.306	Amphiprion_ocellaris
ENSMGAG00000012146	XRCC6	99	58.958	ENSAPEG00000020712	xrcc6	99	58.795	Amphiprion_percula
ENSMGAG00000012146	XRCC6	99	57.929	ENSATEG00000007119	xrcc6	99	57.767	Anabas_testudineus
ENSMGAG00000012146	XRCC6	89	89.051	ENSAPLG00000004469	XRCC6	99	89.560	Anas_platyrhynchos
ENSMGAG00000012146	XRCC6	99	69.657	ENSANAG00000018684	XRCC6	98	71.376	Aotus_nancymaae
ENSMGAG00000012146	XRCC6	99	61.338	ENSANAG00000020017	-	99	61.375	Aotus_nancymaae
ENSMGAG00000012146	XRCC6	99	59.609	ENSANAG00000023445	-	99	59.967	Aotus_nancymaae
ENSMGAG00000012146	XRCC6	99	60.848	ENSANAG00000035230	-	99	61.211	Aotus_nancymaae
ENSMGAG00000012146	XRCC6	98	58.891	ENSACLG00000018608	xrcc6	99	58.728	Astatotilapia_calliptera
ENSMGAG00000012146	XRCC6	99	60.940	ENSAMXG00000007545	xrcc6	100	60.778	Astyanax_mexicanus
ENSMGAG00000012146	XRCC6	99	69.657	ENSCJAG00000045512	XRCC6	99	69.821	Callithrix_jacchus
ENSMGAG00000012146	XRCC6	99	68.515	ENSTSYG00000011348	XRCC6	99	68.740	Carlito_syrichta
ENSMGAG00000012146	XRCC6	99	55.302	ENSCCAG00000035711	-	99	55.465	Cebus_capucinus
ENSMGAG00000012146	XRCC6	99	65.416	ENSCCAG00000030041	-	95	65.466	Cebus_capucinus
ENSMGAG00000012146	XRCC6	96	63.957	ENSCCAG00000030468	-	99	64.228	Cebus_capucinus
ENSMGAG00000012146	XRCC6	99	57.143	ENSCCAG00000037663	-	97	57.143	Cebus_capucinus
ENSMGAG00000012146	XRCC6	99	69.494	ENSCATG00000042366	XRCC6	98	71.012	Cercocebus_atys
ENSMGAG00000012146	XRCC6	99	68.352	ENSCLAG00000016669	XRCC6	99	68.412	Chinchilla_lanigera
ENSMGAG00000012146	XRCC6	99	69.494	ENSCSAG00000005784	XRCC6	99	69.722	Chlorocebus_sabaeus
ENSMGAG00000012146	XRCC6	99	79.316	ENSCPBG00000020535	XRCC6	99	78.990	Chrysemys_picta_bellii
ENSMGAG00000012146	XRCC6	95	36.589	ENSCING00000000633	-	96	36.851	Ciona_intestinalis
ENSMGAG00000012146	XRCC6	99	69.494	ENSCANG00000031032	XRCC6	99	69.722	Colobus_angolensis_palliatus
ENSMGAG00000012146	XRCC6	99	61.664	ENSCGRG00001019029	Xrcc6	99	61.702	Cricetulus_griseus_chok1gshd
ENSMGAG00000012146	XRCC6	99	68.515	ENSCGRG00000001528	Xrcc6	99	68.576	Cricetulus_griseus_crigri
ENSMGAG00000012146	XRCC6	99	56.240	ENSCSEG00000020434	xrcc6	99	56.078	Cynoglossus_semilaevis
ENSMGAG00000012146	XRCC6	99	59.675	ENSCVAG00000002189	xrcc6	99	59.512	Cyprinodon_variegatus
ENSMGAG00000012146	XRCC6	99	59.709	ENSDARG00000071551	xrcc6	99	59.385	Danio_rerio
ENSMGAG00000012146	XRCC6	78	63.043	ENSETEG00000015333	-	78	63.107	Echinops_telfairi
ENSMGAG00000012146	XRCC6	99	69.005	ENSEASG00005001514	XRCC6	99	69.005	Equus_asinus_asinus
ENSMGAG00000012146	XRCC6	99	68.515	ENSECAG00000017563	XRCC6	99	69.627	Equus_caballus
ENSMGAG00000012146	XRCC6	99	57.749	ENSELUG00000020301	xrcc6	99	57.586	Esox_lucius
ENSMGAG00000012146	XRCC6	99	82.982	ENSFALG00000011908	XRCC6	97	82.982	Ficedula_albicollis
ENSMGAG00000012146	XRCC6	99	59.283	ENSFHEG00000016833	xrcc6	99	59.675	Fundulus_heteroclitus
ENSMGAG00000012146	XRCC6	98	51.057	ENSGMOG00000013524	xrcc6	99	51.057	Gadus_morhua
ENSMGAG00000012146	XRCC6	99	95.765	ENSGALG00000011932	XRCC6	100	95.765	Gallus_gallus
ENSMGAG00000012146	XRCC6	99	57.724	ENSGAFG00000008130	xrcc6	99	57.818	Gambusia_affinis
ENSMGAG00000012146	XRCC6	99	58.279	ENSGACG00000004868	xrcc6	99	58.279	Gasterosteus_aculeatus
ENSMGAG00000012146	XRCC6	99	78.176	ENSGAGG00000017518	XRCC6	99	77.850	Gopherus_agassizii
ENSMGAG00000012146	XRCC6	99	69.331	ENSGGOG00000015885	XRCC6	99	69.494	Gorilla_gorilla
ENSMGAG00000012146	XRCC6	90	60.213	ENSHBUG00000023281	xrcc6	99	60.213	Haplochromis_burtoni
ENSMGAG00000012146	XRCC6	99	67.374	ENSHGLG00000018078	XRCC6	99	67.594	Heterocephalus_glaber_female
ENSMGAG00000012146	XRCC6	99	67.374	ENSHGLG00100011264	XRCC6	99	67.594	Heterocephalus_glaber_male
ENSMGAG00000012146	XRCC6	99	56.169	ENSHCOG00000009821	xrcc6	99	55.645	Hippocampus_comes
ENSMGAG00000012146	XRCC6	99	60.616	ENSIPUG00000000767	xrcc6	99	60.454	Ictalurus_punctatus
ENSMGAG00000012146	XRCC6	99	69.821	ENSSTOG00000009490	XRCC6	99	69.558	Ictidomys_tridecemlineatus
ENSMGAG00000012146	XRCC6	99	61.827	ENSJJAG00000017136	Xrcc6	99	63.011	Jaculus_jaculus
ENSMGAG00000012146	XRCC6	99	58.862	ENSKMAG00000002141	xrcc6	99	58.699	Kryptolebias_marmoratus
ENSMGAG00000012146	XRCC6	99	59.319	ENSLBEG00000002691	xrcc6	99	59.157	Labrus_bergylta
ENSMGAG00000012146	XRCC6	83	60.194	ENSLOCG00000011533	xrcc6	99	60.194	Lepisosteus_oculatus
ENSMGAG00000012146	XRCC6	99	69.494	ENSMFAG00000003352	XRCC6	98	71.455	Macaca_fascicularis
ENSMGAG00000012146	XRCC6	99	69.494	ENSMMUG00000001856	XRCC6	99	69.722	Macaca_mulatta
ENSMGAG00000012146	XRCC6	99	69.494	ENSMNEG00000035076	XRCC6	98	71.507	Macaca_nemestrina
ENSMGAG00000012146	XRCC6	99	69.494	ENSMLEG00000019869	XRCC6	99	69.722	Mandrillus_leucophaeus
ENSMGAG00000012146	XRCC6	94	57.313	ENSMAMG00000003405	xrcc6	97	57.313	Mastacembelus_armatus
ENSMGAG00000012146	XRCC6	99	56.311	ENSMAMG00000003368	xrcc6	99	56.311	Mastacembelus_armatus
ENSMGAG00000012146	XRCC6	98	58.728	ENSMZEG00005028080	xrcc6	99	58.564	Maylandia_zebra
ENSMGAG00000012146	XRCC6	99	67.374	ENSMAUG00000017340	Xrcc6	99	67.430	Mesocricetus_auratus
ENSMGAG00000012146	XRCC6	99	67.863	ENSMOCG00000015717	Xrcc6	99	67.921	Microtus_ochrogaster
ENSMGAG00000012146	XRCC6	99	57.492	ENSMMOG00000003536	xrcc6	99	57.096	Mola_mola
ENSMGAG00000012146	XRCC6	99	58.604	ENSMALG00000013912	xrcc6	95	58.537	Monopterus_albus
ENSMGAG00000012146	XRCC6	99	61.827	MGP_CAROLIEiJ_G0020067	Xrcc6	99	61.866	Mus_caroli
ENSMGAG00000012146	XRCC6	99	66.395	ENSMUSG00000022471	Xrcc6	99	66.923	Mus_musculus
ENSMGAG00000012146	XRCC6	99	66.558	MGP_PahariEiJ_G0020069	Xrcc6	99	66.612	Mus_pahari
ENSMGAG00000012146	XRCC6	95	67.863	MGP_SPRETEiJ_G0020967	Xrcc6	99	68.158	Mus_spretus
ENSMGAG00000012146	XRCC6	99	66.884	ENSNGAG00000013750	Xrcc6	99	66.939	Nannospalax_galili
ENSMGAG00000012146	XRCC6	98	59.054	ENSNBRG00000004125	xrcc6	99	58.891	Neolamprologus_brichardi
ENSMGAG00000012146	XRCC6	94	68.729	ENSOPRG00000002386	XRCC6	100	68.729	Ochotona_princeps
ENSMGAG00000012146	XRCC6	99	66.232	ENSODEG00000015847	XRCC6	99	66.285	Octodon_degus
ENSMGAG00000012146	XRCC6	99	59.740	ENSONIG00000019715	xrcc6	99	59.706	Oreochromis_niloticus
ENSMGAG00000012146	XRCC6	67	76.029	ENSOANG00000011328	XRCC6	99	76.156	Ornithorhynchus_anatinus
ENSMGAG00000012146	XRCC6	99	68.189	ENSOCUG00000006948	XRCC6	99	68.412	Oryctolagus_cuniculus
ENSMGAG00000012146	XRCC6	99	58.632	ENSORLG00020007820	xrcc6	99	58.632	Oryzias_latipes_hni
ENSMGAG00000012146	XRCC6	99	58.632	ENSORLG00015006406	xrcc6	99	58.632	Oryzias_latipes_hsok
ENSMGAG00000012146	XRCC6	99	58.795	ENSOMEG00000008998	xrcc6	99	58.795	Oryzias_melastigma
ENSMGAG00000012146	XRCC6	99	68.026	ENSOGAG00000008821	XRCC6	99	67.758	Otolemur_garnettii
ENSMGAG00000012146	XRCC6	89	70.370	ENSPPAG00000037167	XRCC6	99	70.370	Pan_paniscus
ENSMGAG00000012146	XRCC6	99	69.331	ENSPTRG00000022548	XRCC6	99	70.890	Pan_troglodytes
ENSMGAG00000012146	XRCC6	99	69.331	ENSPTRG00000045824	XRCC6	99	70.890	Pan_troglodytes
ENSMGAG00000012146	XRCC6	99	69.331	ENSPANG00000001252	XRCC6	99	70.840	Papio_anubis
ENSMGAG00000012146	XRCC6	99	61.426	ENSPKIG00000003974	xrcc6	99	61.264	Paramormyrops_kingsleyae
ENSMGAG00000012146	XRCC6	98	57.610	ENSPMGG00000014220	xrcc6	100	57.471	Periophthalmus_magnuspinnatus
ENSMGAG00000012146	XRCC6	99	66.232	ENSPEMG00000023446	Xrcc6	99	66.285	Peromyscus_maniculatus_bairdii
ENSMGAG00000012146	XRCC6	99	68.730	ENSPCIG00000026409	XRCC6	99	68.954	Phascolarctos_cinereus
ENSMGAG00000012146	XRCC6	94	59.760	ENSPFOG00000017173	xrcc6	99	58.469	Poecilia_formosa
ENSMGAG00000012146	XRCC6	94	59.418	ENSPLAG00000000562	xrcc6	99	58.143	Poecilia_latipinna
ENSMGAG00000012146	XRCC6	99	58.469	ENSPMEG00000018478	xrcc6	99	58.469	Poecilia_mexicana
ENSMGAG00000012146	XRCC6	99	58.158	ENSPREG00000020957	xrcc6	93	57.997	Poecilia_reticulata
ENSMGAG00000012146	XRCC6	99	60.359	ENSPPYG00000011876	XRCC6	99	60.685	Pongo_abelii
ENSMGAG00000012146	XRCC6	99	67.047	ENSPVAG00000001168	XRCC6	99	67.267	Pteropus_vampyrus
ENSMGAG00000012146	XRCC6	99	58.766	ENSPNYG00000003815	xrcc6	99	55.745	Pundamilia_nyererei
ENSMGAG00000012146	XRCC6	99	67.210	ENSRNOG00000006392	Xrcc6	99	67.103	Rattus_norvegicus
ENSMGAG00000012146	XRCC6	99	64.763	ENSRBIG00000039794	XRCC6	99	65.690	Rhinopithecus_bieti
ENSMGAG00000012146	XRCC6	99	69.494	ENSRROG00000030297	XRCC6	99	69.722	Rhinopithecus_roxellana
ENSMGAG00000012146	XRCC6	66	60.934	ENSSBOG00000024724	-	99	60.934	Saimiri_boliviensis_boliviensis
ENSMGAG00000012146	XRCC6	99	67.915	ENSSHAG00000010790	XRCC6	99	68.137	Sarcophilus_harrisii
ENSMGAG00000012146	XRCC6	99	60.616	ENSSFOG00015014409	xrcc6	99	60.454	Scleropages_formosus
ENSMGAG00000012146	XRCC6	98	59.706	ENSSMAG00000006496	xrcc6	99	59.543	Scophthalmus_maximus
ENSMGAG00000012146	XRCC6	99	57.929	ENSSDUG00000007542	xrcc6	99	57.767	Seriola_dumerili
ENSMGAG00000012146	XRCC6	99	57.861	ENSSLDG00000009974	xrcc6	99	57.699	Seriola_lalandi_dorsalis
ENSMGAG00000012146	XRCC6	99	75.896	ENSSPUG00000012086	XRCC6	99	75.856	Sphenodon_punctatus
ENSMGAG00000012146	XRCC6	99	59.675	ENSSPAG00000015199	xrcc6	99	59.609	Stegastes_partitus
ENSMGAG00000012146	XRCC6	95	85.495	ENSTGUG00000009852	-	99	84.314	Taeniopygia_guttata
ENSMGAG00000012146	XRCC6	99	56.770	ENSTRUG00000017070	xrcc6	99	56.770	Takifugu_rubripes
ENSMGAG00000012146	XRCC6	94	57.022	ENSTNIG00000012947	xrcc6	99	57.191	Tetraodon_nigroviridis
ENSMGAG00000012146	XRCC6	94	64.261	ENSTBEG00000011736	XRCC6	99	64.310	Tupaia_belangeri
ENSMGAG00000012146	XRCC6	99	56.607	ENSTTRG00000006749	XRCC6	99	57.259	Tursiops_truncatus
ENSMGAG00000012146	XRCC6	99	58.537	ENSXMAG00000009691	xrcc6	99	58.469	Xiphophorus_maculatus