EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000012167 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 21534 bases
Position: chr3:78154353-78175886
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000012786	POP1	PF06978.11	1.4e-37	1	2
ENSMGAP00000012786	POP1	PF06978.11	1.4e-37	2	2
ENSMGAP00000012786	POPLD	PF08170.12	4.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000013684	POP1-201	3156	-	ENSMGAP00000012786	1028 (aa)	-	G1NHV2

Gene Model

Click here to download ENSMGAG00000012167's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG
mgp03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000012167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000012167	POP1	100	58.846	ENSG00000104356	POP1	100	58.215	Homo_sapiens
ENSMGAG00000012167	POP1	100	46.927	ENSAPOG00000008198	pop1	100	46.878	Acanthochromis_polyacanthus
ENSMGAG00000012167	POP1	100	59.925	ENSAMEG00000000556	POP1	100	59.718	Ailuropoda_melanoleuca
ENSMGAG00000012167	POP1	100	45.480	ENSACIG00000004169	POP1	100	45.042	Amphilophus_citrinellus
ENSMGAG00000012167	POP1	100	46.067	ENSAOCG00000010991	pop1	100	45.767	Amphiprion_ocellaris
ENSMGAG00000012167	POP1	100	43.989	ENSAPEG00000007607	pop1	95	46.201	Amphiprion_percula
ENSMGAG00000012167	POP1	100	46.698	ENSATEG00000024814	POP1	100	46.226	Anabas_testudineus
ENSMGAG00000012167	POP1	93	83.593	ENSAPLG00000014418	POP1	99	83.438	Anas_platyrhynchos
ENSMGAG00000012167	POP1	100	58.206	ENSACAG00000016083	POP1	100	58.055	Anolis_carolinensis
ENSMGAG00000012167	POP1	90	61.236	ENSANAG00000026360	POP1	100	60.845	Aotus_nancymaae
ENSMGAG00000012167	POP1	100	47.026	ENSACLG00000010951	pop1	100	46.843	Astatotilapia_calliptera
ENSMGAG00000012167	POP1	100	45.795	ENSAMXG00000014483	POP1	100	44.708	Astyanax_mexicanus
ENSMGAG00000012167	POP1	100	56.026	ENSBTAG00000012596	POP1	100	55.325	Bos_taurus
ENSMGAG00000012167	POP1	100	58.381	ENSCJAG00000015567	POP1	100	57.769	Callithrix_jacchus
ENSMGAG00000012167	POP1	100	58.935	ENSCAFG00000000469	POP1	100	58.397	Canis_familiaris
ENSMGAG00000012167	POP1	100	59.623	ENSCAFG00020026765	POP1	100	59.091	Canis_lupus_dingo
ENSMGAG00000012167	POP1	100	56.714	ENSCHIG00000017066	POP1	100	56.522	Capra_hircus
ENSMGAG00000012167	POP1	100	57.008	ENSTSYG00000003097	POP1	100	56.629	Carlito_syrichta
ENSMGAG00000012167	POP1	100	55.000	ENSCAPG00000007251	POP1	100	55.090	Cavia_aperea
ENSMGAG00000012167	POP1	100	56.209	ENSCPOG00000002901	POP1	100	56.310	Cavia_porcellus
ENSMGAG00000012167	POP1	100	57.755	ENSCCAG00000018939	POP1	100	57.333	Cebus_capucinus
ENSMGAG00000012167	POP1	100	58.467	ENSCATG00000040916	POP1	100	57.835	Cercocebus_atys
ENSMGAG00000012167	POP1	100	57.116	ENSCLAG00000007208	POP1	97	56.979	Chinchilla_lanigera
ENSMGAG00000012167	POP1	91	61.409	ENSCSAG00000012340	POP1	99	61.409	Chlorocebus_sabaeus
ENSMGAG00000012167	POP1	88	64.407	ENSCHOG00000011432	POP1	91	68.605	Choloepus_hoffmanni
ENSMGAG00000012167	POP1	100	69.656	ENSCPBG00000006373	POP1	100	69.466	Chrysemys_picta_bellii
ENSMGAG00000012167	POP1	82	40.000	ENSCING00000008323	-	88	40.000	Ciona_intestinalis
ENSMGAG00000012167	POP1	100	58.940	ENSCANG00000001647	POP1	100	58.310	Colobus_angolensis_palliatus
ENSMGAG00000012167	POP1	100	57.429	ENSCGRG00001017308	Pop1	100	57.293	Cricetulus_griseus_chok1gshd
ENSMGAG00000012167	POP1	100	54.031	ENSCGRG00000010824	Pop1	100	54.319	Cricetulus_griseus_crigri
ENSMGAG00000012167	POP1	100	45.140	ENSCSEG00000008737	POP1	100	44.869	Cynoglossus_semilaevis
ENSMGAG00000012167	POP1	100	46.578	ENSCVAG00000022248	pop1	100	46.293	Cyprinodon_variegatus
ENSMGAG00000012167	POP1	50	44.961	ENSDARG00000102087	pop1	99	44.380	Danio_rerio
ENSMGAG00000012167	POP1	100	57.692	ENSDNOG00000019974	POP1	100	56.942	Dasypus_novemcinctus
ENSMGAG00000012167	POP1	100	52.268	ENSDORG00000015384	Pop1	100	52.174	Dipodomys_ordii
ENSMGAG00000012167	POP1	79	33.028	FBgn0026702	l(1)G0045	93	32.982	Drosophila_melanogaster
ENSMGAG00000012167	POP1	89	53.523	ENSETEG00000007839	POP1	88	52.852	Echinops_telfairi
ENSMGAG00000012167	POP1	100	57.875	ENSEASG00005003189	POP1	98	57.550	Equus_asinus_asinus
ENSMGAG00000012167	POP1	100	58.065	ENSECAG00000024236	POP1	100	57.645	Equus_caballus
ENSMGAG00000012167	POP1	63	52.203	ENSEEUG00000003050	-	55	79.518	Erinaceus_europaeus
ENSMGAG00000012167	POP1	100	45.817	ENSELUG00000003526	pop1	100	45.943	Esox_lucius
ENSMGAG00000012167	POP1	100	58.318	ENSFCAG00000002168	POP1	100	58.223	Felis_catus
ENSMGAG00000012167	POP1	100	78.866	ENSFALG00000005711	POP1	100	79.155	Ficedula_albicollis
ENSMGAG00000012167	POP1	100	56.250	ENSFDAG00000017068	POP1	100	56.232	Fukomys_damarensis
ENSMGAG00000012167	POP1	100	46.523	ENSFHEG00000019518	pop1	100	46.277	Fundulus_heteroclitus
ENSMGAG00000012167	POP1	100	42.214	ENSGMOG00000000659	POP1	95	44.467	Gadus_morhua
ENSMGAG00000012167	POP1	100	46.323	ENSGAFG00000019770	POP1	100	45.962	Gambusia_affinis
ENSMGAG00000012167	POP1	100	45.125	ENSGACG00000003499	pop1	100	44.506	Gasterosteus_aculeatus
ENSMGAG00000012167	POP1	100	69.136	ENSGAGG00000011737	POP1	98	68.851	Gopherus_agassizii
ENSMGAG00000012167	POP1	100	58.333	ENSGGOG00000003176	POP1	100	58.025	Gorilla_gorilla
ENSMGAG00000012167	POP1	100	46.741	ENSHBUG00000021583	pop1	100	46.747	Haplochromis_burtoni
ENSMGAG00000012167	POP1	100	56.588	ENSHGLG00000006029	POP1	100	56.534	Heterocephalus_glaber_female
ENSMGAG00000012167	POP1	100	56.588	ENSHGLG00100016879	POP1	100	56.534	Heterocephalus_glaber_male
ENSMGAG00000012167	POP1	90	47.368	ENSHCOG00000013888	pop1	96	47.263	Hippocampus_comes
ENSMGAG00000012167	POP1	100	45.109	ENSIPUG00000018336	pop1	91	63.855	Ictalurus_punctatus
ENSMGAG00000012167	POP1	100	57.564	ENSSTOG00000011455	POP1	97	57.048	Ictidomys_tridecemlineatus
ENSMGAG00000012167	POP1	100	55.661	ENSJJAG00000013325	Pop1	100	55.439	Jaculus_jaculus
ENSMGAG00000012167	POP1	100	46.095	ENSKMAG00000001346	POP1	100	46.117	Kryptolebias_marmoratus
ENSMGAG00000012167	POP1	83	52.194	ENSLBEG00000024457	POP1	91	52.147	Labrus_bergylta
ENSMGAG00000012167	POP1	93	56.807	ENSLACG00000012498	POP1	97	57.752	Latimeria_chalumnae
ENSMGAG00000012167	POP1	100	49.005	ENSLOCG00000009817	POP1	100	48.439	Lepisosteus_oculatus
ENSMGAG00000012167	POP1	100	59.134	ENSLAFG00000010770	POP1	100	59.449	Loxodonta_africana
ENSMGAG00000012167	POP1	100	58.657	ENSMFAG00000000347	POP1	100	58.025	Macaca_fascicularis
ENSMGAG00000012167	POP1	100	58.373	ENSMNEG00000036870	POP1	100	57.740	Macaca_nemestrina
ENSMGAG00000012167	POP1	100	58.657	ENSMLEG00000034986	POP1	100	58.025	Mandrillus_leucophaeus
ENSMGAG00000012167	POP1	100	47.854	ENSMAMG00000004040	pop1	100	47.261	Mastacembelus_armatus
ENSMGAG00000012167	POP1	100	47.026	ENSMZEG00005025448	pop1	100	46.987	Maylandia_zebra
ENSMGAG00000012167	POP1	100	58.341	ENSMAUG00000017537	Pop1	100	57.920	Mesocricetus_auratus
ENSMGAG00000012167	POP1	100	57.860	ENSMICG00000004361	POP1	100	57.576	Microcebus_murinus
ENSMGAG00000012167	POP1	100	56.497	ENSMOCG00000006356	Pop1	100	56.670	Microtus_ochrogaster
ENSMGAG00000012167	POP1	100	44.656	ENSMMOG00000018242	pop1	100	43.893	Mola_mola
ENSMGAG00000012167	POP1	100	58.208	ENSMODG00000006561	POP1	100	58.208	Monodelphis_domestica
ENSMGAG00000012167	POP1	100	48.068	ENSMALG00000012621	POP1	100	47.777	Monopterus_albus
ENSMGAG00000012167	POP1	100	56.600	MGP_CAROLIEiJ_G0019726	Pop1	100	56.654	Mus_caroli
ENSMGAG00000012167	POP1	100	57.089	ENSMUSG00000022325	Pop1	100	56.632	Mus_musculus
ENSMGAG00000012167	POP1	100	56.109	MGP_PahariEiJ_G0019735	Pop1	100	55.838	Mus_pahari
ENSMGAG00000012167	POP1	100	57.306	MGP_SPRETEiJ_G0020622	Pop1	100	57.224	Mus_spretus
ENSMGAG00000012167	POP1	100	58.807	ENSMPUG00000015250	POP1	100	58.129	Mustela_putorius_furo
ENSMGAG00000012167	POP1	100	54.967	ENSMLUG00000010204	POP1	100	54.416	Myotis_lucifugus
ENSMGAG00000012167	POP1	100	56.736	ENSNGAG00000001582	Pop1	100	56.600	Nannospalax_galili
ENSMGAG00000012167	POP1	100	45.128	ENSNBRG00000002356	pop1	100	45.033	Neolamprologus_brichardi
ENSMGAG00000012167	POP1	100	58.074	ENSNLEG00000002541	POP1	100	57.441	Nomascus_leucogenys
ENSMGAG00000012167	POP1	87	58.297	ENSMEUG00000003118	POP1	92	58.998	Notamacropus_eugenii
ENSMGAG00000012167	POP1	100	55.840	ENSOPRG00000007667	POP1	100	55.333	Ochotona_princeps
ENSMGAG00000012167	POP1	100	56.654	ENSODEG00000003984	POP1	100	56.505	Octodon_degus
ENSMGAG00000012167	POP1	100	47.383	ENSONIG00000016445	pop1	100	47.314	Oreochromis_niloticus
ENSMGAG00000012167	POP1	60	55.952	ENSOANG00000001278	-	94	54.356	Ornithorhynchus_anatinus
ENSMGAG00000012167	POP1	100	56.232	ENSOCUG00000017400	POP1	100	55.827	Oryctolagus_cuniculus
ENSMGAG00000012167	POP1	100	47.479	ENSORLG00000002839	pop1	100	46.724	Oryzias_latipes
ENSMGAG00000012167	POP1	90	47.971	ENSORLG00020022450	POP1	96	47.723	Oryzias_latipes_hni
ENSMGAG00000012167	POP1	100	47.574	ENSORLG00015012746	POP1	100	46.780	Oryzias_latipes_hsok
ENSMGAG00000012167	POP1	100	48.081	ENSOMEG00000006915	pop1	99	47.464	Oryzias_melastigma
ENSMGAG00000012167	POP1	100	56.818	ENSOGAG00000001466	POP1	100	56.641	Otolemur_garnettii
ENSMGAG00000012167	POP1	100	58.751	ENSPPAG00000018410	POP1	100	58.120	Pan_paniscus
ENSMGAG00000012167	POP1	100	57.875	ENSPPRG00000005002	POP1	100	57.750	Panthera_pardus
ENSMGAG00000012167	POP1	100	58.065	ENSPTIG00000016527	POP1	100	57.940	Panthera_tigris_altaica
ENSMGAG00000012167	POP1	100	58.846	ENSPTRG00000020458	POP1	100	58.215	Pan_troglodytes
ENSMGAG00000012167	POP1	100	58.562	ENSPANG00000009704	POP1	100	57.930	Papio_anubis
ENSMGAG00000012167	POP1	100	47.328	ENSPKIG00000016325	POP1	100	46.469	Paramormyrops_kingsleyae
ENSMGAG00000012167	POP1	100	67.142	ENSPSIG00000012343	POP1	100	66.762	Pelodiscus_sinensis
ENSMGAG00000012167	POP1	100	45.498	ENSPMGG00000022253	POP1	100	46.073	Periophthalmus_magnuspinnatus
ENSMGAG00000012167	POP1	99	57.495	ENSPEMG00000023633	Pop1	100	57.550	Peromyscus_maniculatus_bairdii
ENSMGAG00000012167	POP1	90	41.262	ENSPMAG00000003209	POP1	99	40.538	Petromyzon_marinus
ENSMGAG00000012167	POP1	100	57.949	ENSPCIG00000012216	POP1	100	56.876	Phascolarctos_cinereus
ENSMGAG00000012167	POP1	100	47.283	ENSPFOG00000012490	POP1	100	47.081	Poecilia_formosa
ENSMGAG00000012167	POP1	100	47.042	ENSPLAG00000004646	POP1	100	46.890	Poecilia_latipinna
ENSMGAG00000012167	POP1	100	46.997	ENSPMEG00000019592	POP1	100	46.839	Poecilia_mexicana
ENSMGAG00000012167	POP1	100	47.193	ENSPREG00000020951	POP1	100	46.750	Poecilia_reticulata
ENSMGAG00000012167	POP1	100	58.657	ENSPPYG00000018777	POP1	100	58.025	Pongo_abelii
ENSMGAG00000012167	POP1	100	55.376	ENSPCAG00000016662	POP1	100	55.439	Procavia_capensis
ENSMGAG00000012167	POP1	100	58.571	ENSPCOG00000019420	POP1	100	58.270	Propithecus_coquereli
ENSMGAG00000012167	POP1	100	57.759	ENSPVAG00000014468	POP1	100	57.608	Pteropus_vampyrus
ENSMGAG00000012167	POP1	100	45.774	ENSPNYG00000004476	pop1	100	45.489	Pundamilia_nyererei
ENSMGAG00000012167	POP1	100	44.313	ENSPNAG00000000265	pop1	100	43.391	Pygocentrus_nattereri
ENSMGAG00000012167	POP1	100	56.695	ENSRNOG00000005243	Pop1	100	56.749	Rattus_norvegicus
ENSMGAG00000012167	POP1	100	58.657	ENSRBIG00000007996	POP1	100	58.025	Rhinopithecus_bieti
ENSMGAG00000012167	POP1	100	58.657	ENSRROG00000012334	POP1	100	58.025	Rhinopithecus_roxellana
ENSMGAG00000012167	POP1	99	57.824	ENSSBOG00000020830	POP1	100	56.897	Saimiri_boliviensis_boliviensis
ENSMGAG00000012167	POP1	100	59.831	ENSSHAG00000000296	POP1	100	59.439	Sarcophilus_harrisii
ENSMGAG00000012167	POP1	100	47.469	ENSSFOG00015007429	pop1	99	46.896	Scleropages_formosus
ENSMGAG00000012167	POP1	93	49.125	ENSSMAG00000010467	POP1	100	45.722	Scophthalmus_maximus
ENSMGAG00000012167	POP1	100	46.204	ENSSDUG00000007817	POP1	100	45.287	Seriola_dumerili
ENSMGAG00000012167	POP1	100	46.204	ENSSLDG00000012565	POP1	100	45.471	Seriola_lalandi_dorsalis
ENSMGAG00000012167	POP1	100	62.224	ENSSPUG00000003550	-	100	62.237	Sphenodon_punctatus
ENSMGAG00000012167	POP1	100	46.731	ENSSPAG00000014955	pop1	94	48.732	Stegastes_partitus
ENSMGAG00000012167	POP1	100	57.744	ENSSSCG00000006078	POP1	100	57.744	Sus_scrofa
ENSMGAG00000012167	POP1	93	71.562	ENSTGUG00000012011	-	99	71.563	Taeniopygia_guttata
ENSMGAG00000012167	POP1	100	44.370	ENSTRUG00000010856	pop1	100	44.327	Takifugu_rubripes
ENSMGAG00000012167	POP1	93	46.578	ENSTNIG00000013297	pop1	97	46.937	Tetraodon_nigroviridis
ENSMGAG00000012167	POP1	96	55.500	ENSTBEG00000014214	POP1	96	57.188	Tupaia_belangeri
ENSMGAG00000012167	POP1	100	56.638	ENSTTRG00000016071	POP1	100	56.543	Tursiops_truncatus
ENSMGAG00000012167	POP1	99	58.357	ENSUAMG00000017309	POP1	95	60.562	Ursus_americanus
ENSMGAG00000012167	POP1	100	57.598	ENSUMAG00000016952	POP1	100	62.800	Ursus_maritimus
ENSMGAG00000012167	POP1	83	60.727	ENSVPAG00000008278	POP1	82	59.273	Vicugna_pacos
ENSMGAG00000012167	POP1	100	59.528	ENSVVUG00000010994	POP1	100	59.057	Vulpes_vulpes
ENSMGAG00000012167	POP1	100	42.966	ENSXCOG00000017043	POP1	100	42.749	Xiphophorus_couchianus
ENSMGAG00000012167	POP1	100	46.800	ENSXMAG00000002472	POP1	100	46.711	Xiphophorus_maculatus