EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000012470 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 9953 bases
Position: chr2:46744035-46753987
Accession: 100550227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000013139	CAF1	PF04857.20	1.3e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000014041	PNLDC1-201	1557	XM_019612882	ENSMGAP00000013139	519 (aa)	XP_019468427	G1NIN2

Gene Model

Click here to download ENSMGAG00000012470's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000012470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000012470	PNLDC1	97	58.743	ENSG00000146453	PNLDC1	98	58.743	Homo_sapiens
ENSMGAG00000012470	PNLDC1	97	59.010	ENSAMEG00000015371	PNLDC1	95	59.010	Ailuropoda_melanoleuca
ENSMGAG00000012470	PNLDC1	99	79.423	ENSAPLG00000007014	PNLDC1	99	79.423	Anas_platyrhynchos
ENSMGAG00000012470	PNLDC1	97	60.672	ENSACAG00000013667	PNLDC1	96	60.672	Anolis_carolinensis
ENSMGAG00000012470	PNLDC1	97	57.480	ENSANAG00000034713	PNLDC1	95	57.480	Aotus_nancymaae
ENSMGAG00000012470	PNLDC1	97	58.777	ENSBTAG00000015166	PNLDC1	98	58.046	Bos_taurus
ENSMGAG00000012470	PNLDC1	97	57.480	ENSCJAG00000011865	PNLDC1	99	57.283	Callithrix_jacchus
ENSMGAG00000012470	PNLDC1	97	59.289	ENSCAFG00000000740	PNLDC1	95	59.289	Canis_familiaris
ENSMGAG00000012470	PNLDC1	97	57.510	ENSCAFG00020017742	PNLDC1	95	57.510	Canis_lupus_dingo
ENSMGAG00000012470	PNLDC1	98	56.360	ENSCHIG00000003141	PNLDC1	97	56.360	Capra_hircus
ENSMGAG00000012470	PNLDC1	97	56.299	ENSTSYG00000005606	PNLDC1	95	56.299	Carlito_syrichta
ENSMGAG00000012470	PNLDC1	88	48.164	ENSCAPG00000011893	PNLDC1	89	48.164	Cavia_aperea
ENSMGAG00000012470	PNLDC1	97	55.992	ENSCPOG00000019565	PNLDC1	95	55.992	Cavia_porcellus
ENSMGAG00000012470	PNLDC1	97	57.480	ENSCCAG00000026232	PNLDC1	95	57.480	Cebus_capucinus
ENSMGAG00000012470	PNLDC1	97	57.480	ENSCATG00000033196	PNLDC1	95	57.480	Cercocebus_atys
ENSMGAG00000012470	PNLDC1	97	60.039	ENSCLAG00000003228	PNLDC1	95	60.039	Chinchilla_lanigera
ENSMGAG00000012470	PNLDC1	97	57.339	ENSCSAG00000012478	PNLDC1	98	57.339	Chlorocebus_sabaeus
ENSMGAG00000012470	PNLDC1	93	69.628	ENSCPBG00000004050	PNLDC1	95	69.628	Chrysemys_picta_bellii
ENSMGAG00000012470	PNLDC1	97	57.760	ENSCANG00000043076	PNLDC1	98	57.760	Colobus_angolensis_palliatus
ENSMGAG00000012470	PNLDC1	97	45.294	ENSCGRG00001011981	-	94	45.294	Cricetulus_griseus_chok1gshd
ENSMGAG00000012470	PNLDC1	97	56.496	ENSCGRG00001007470	-	95	56.496	Cricetulus_griseus_chok1gshd
ENSMGAG00000012470	PNLDC1	97	46.365	ENSCGRG00000003103	-	94	46.365	Cricetulus_griseus_crigri
ENSMGAG00000012470	PNLDC1	97	56.496	ENSCGRG00000010221	-	95	56.496	Cricetulus_griseus_crigri
ENSMGAG00000012470	PNLDC1	97	58.268	ENSDNOG00000013709	PNLDC1	95	58.268	Dasypus_novemcinctus
ENSMGAG00000012470	PNLDC1	97	54.043	ENSDORG00000011517	Pnldc1	92	58.478	Dipodomys_ordii
ENSMGAG00000012470	PNLDC1	93	52.049	ENSETEG00000007587	PNLDC1	98	52.049	Echinops_telfairi
ENSMGAG00000012470	PNLDC1	95	31.801	ENSEBUG00000008118	PNLDC1	94	31.801	Eptatretus_burgeri
ENSMGAG00000012470	PNLDC1	97	54.902	ENSEASG00005019029	PNLDC1	95	54.902	Equus_asinus_asinus
ENSMGAG00000012470	PNLDC1	97	59.684	ENSECAG00000012898	PNLDC1	95	59.684	Equus_caballus
ENSMGAG00000012470	PNLDC1	62	46.154	ENSEEUG00000005717	-	77	46.154	Erinaceus_europaeus
ENSMGAG00000012470	PNLDC1	97	60.079	ENSFCAG00000002848	PNLDC1	95	60.079	Felis_catus
ENSMGAG00000012470	PNLDC1	97	76.143	ENSFALG00000012081	PNLDC1	99	76.143	Ficedula_albicollis
ENSMGAG00000012470	PNLDC1	97	59.055	ENSFDAG00000021334	PNLDC1	95	59.055	Fukomys_damarensis
ENSMGAG00000012470	PNLDC1	76	93.367	ENSGALG00000011624	PNLDC1	77	93.367	Gallus_gallus
ENSMGAG00000012470	PNLDC1	97	69.980	ENSGAGG00000015276	PNLDC1	100	69.647	Gopherus_agassizii
ENSMGAG00000012470	PNLDC1	97	58.465	ENSGGOG00000014077	PNLDC1	96	57.540	Gorilla_gorilla
ENSMGAG00000012470	PNLDC1	97	58.858	ENSHGLG00000006889	PNLDC1	95	58.858	Heterocephalus_glaber_female
ENSMGAG00000012470	PNLDC1	97	58.858	ENSHGLG00100018275	PNLDC1	95	58.858	Heterocephalus_glaber_male
ENSMGAG00000012470	PNLDC1	97	59.608	ENSSTOG00000005595	PNLDC1	96	59.608	Ictidomys_tridecemlineatus
ENSMGAG00000012470	PNLDC1	97	54.635	ENSJJAG00000009937	Pnldc1	95	54.635	Jaculus_jaculus
ENSMGAG00000012470	PNLDC1	55	59.247	ENSLAFG00000030189	PNLDC1	85	59.247	Loxodonta_africana
ENSMGAG00000012470	PNLDC1	97	57.874	ENSMFAG00000041296	PNLDC1	95	57.874	Macaca_fascicularis
ENSMGAG00000012470	PNLDC1	97	57.874	ENSMMUG00000004181	PNLDC1	98	57.253	Macaca_mulatta
ENSMGAG00000012470	PNLDC1	97	57.874	ENSMNEG00000034271	PNLDC1	95	57.874	Macaca_nemestrina
ENSMGAG00000012470	PNLDC1	97	55.315	ENSMLEG00000044059	PNLDC1	95	55.315	Mandrillus_leucophaeus
ENSMGAG00000012470	PNLDC1	97	47.222	ENSMAUG00000012298	Pnldc1	95	47.222	Mesocricetus_auratus
ENSMGAG00000012470	PNLDC1	97	57.480	ENSMICG00000008021	PNLDC1	95	57.480	Microcebus_murinus
ENSMGAG00000012470	PNLDC1	97	58.235	ENSMOCG00000014287	Pnldc1	95	58.235	Microtus_ochrogaster
ENSMGAG00000012470	PNLDC1	97	61.417	ENSMODG00000007420	PNLDC1	95	61.417	Monodelphis_domestica
ENSMGAG00000012470	PNLDC1	97	58.300	MGP_CAROLIEiJ_G0021045	Pnldc1	95	58.300	Mus_caroli
ENSMGAG00000012470	PNLDC1	97	58.498	ENSMUSG00000073460	Pnldc1	95	58.498	Mus_musculus
ENSMGAG00000012470	PNLDC1	97	58.661	MGP_PahariEiJ_G0023361	Pnldc1	95	58.661	Mus_pahari
ENSMGAG00000012470	PNLDC1	97	58.300	MGP_SPRETEiJ_G0021975	Pnldc1	95	58.300	Mus_spretus
ENSMGAG00000012470	PNLDC1	97	58.696	ENSMPUG00000004920	PNLDC1	95	58.696	Mustela_putorius_furo
ENSMGAG00000012470	PNLDC1	96	60.317	ENSMLUG00000000747	PNLDC1	95	60.317	Myotis_lucifugus
ENSMGAG00000012470	PNLDC1	97	59.252	ENSNGAG00000017714	Pnldc1	95	59.252	Nannospalax_galili
ENSMGAG00000012470	PNLDC1	97	58.743	ENSNLEG00000011282	PNLDC1	98	58.743	Nomascus_leucogenys
ENSMGAG00000012470	PNLDC1	61	51.266	ENSMEUG00000011926	-	63	51.266	Notamacropus_eugenii
ENSMGAG00000012470	PNLDC1	55	56.897	ENSMEUG00000014042	-	100	56.897	Notamacropus_eugenii
ENSMGAG00000012470	PNLDC1	72	57.067	ENSOPRG00000003813	PNLDC1	70	57.067	Ochotona_princeps
ENSMGAG00000012470	PNLDC1	97	58.858	ENSODEG00000008047	PNLDC1	95	58.858	Octodon_degus
ENSMGAG00000012470	PNLDC1	96	50.696	ENSOANG00000012199	PNLDC1	95	51.089	Ornithorhynchus_anatinus
ENSMGAG00000012470	PNLDC1	97	58.696	ENSOCUG00000013867	PNLDC1	95	58.696	Oryctolagus_cuniculus
ENSMGAG00000012470	PNLDC1	97	58.661	ENSOGAG00000007331	PNLDC1	96	58.661	Otolemur_garnettii
ENSMGAG00000012470	PNLDC1	97	57.677	ENSOARG00000004585	PNLDC1	95	57.677	Ovis_aries
ENSMGAG00000012470	PNLDC1	97	58.465	ENSPPAG00000026651	PNLDC1	95	58.465	Pan_paniscus
ENSMGAG00000012470	PNLDC1	97	59.881	ENSPPRG00000012854	PNLDC1	95	59.881	Panthera_pardus
ENSMGAG00000012470	PNLDC1	96	58.250	ENSPTIG00000011501	PNLDC1	94	58.250	Panthera_tigris_altaica
ENSMGAG00000012470	PNLDC1	97	58.743	ENSPTRG00000018762	PNLDC1	98	58.743	Pan_troglodytes
ENSMGAG00000012470	PNLDC1	97	57.874	ENSPANG00000022009	PNLDC1	95	57.874	Papio_anubis
ENSMGAG00000012470	PNLDC1	97	58.300	ENSPEMG00000016301	Pnldc1	95	58.300	Peromyscus_maniculatus_bairdii
ENSMGAG00000012470	PNLDC1	68	30.628	ENSPMAG00000003956	parn	71	30.628	Petromyzon_marinus
ENSMGAG00000012470	PNLDC1	83	62.587	ENSPCIG00000023412	PNLDC1	98	62.587	Phascolarctos_cinereus
ENSMGAG00000012470	PNLDC1	97	54.191	ENSPPYG00000017148	PNLDC1	95	54.191	Pongo_abelii
ENSMGAG00000012470	PNLDC1	97	53.557	ENSPCAG00000014169	PNLDC1	95	53.557	Procavia_capensis
ENSMGAG00000012470	PNLDC1	97	57.874	ENSPCOG00000025722	PNLDC1	95	57.874	Propithecus_coquereli
ENSMGAG00000012470	PNLDC1	69	63.361	ENSPVAG00000005325	PNLDC1	68	63.361	Pteropus_vampyrus
ENSMGAG00000012470	PNLDC1	97	58.498	ENSRNOG00000023140	Pnldc1	100	55.901	Rattus_norvegicus
ENSMGAG00000012470	PNLDC1	97	57.905	ENSRBIG00000033806	PNLDC1	95	57.905	Rhinopithecus_bieti
ENSMGAG00000012470	PNLDC1	97	57.957	ENSRROG00000043919	PNLDC1	98	57.957	Rhinopithecus_roxellana
ENSMGAG00000012470	PNLDC1	97	57.874	ENSSBOG00000019135	PNLDC1	95	57.874	Saimiri_boliviensis_boliviensis
ENSMGAG00000012470	PNLDC1	97	61.493	ENSSHAG00000015192	PNLDC1	97	61.493	Sarcophilus_harrisii
ENSMGAG00000012470	PNLDC1	60	63.141	ENSSPUG00000004627	PNLDC1	100	65.179	Sphenodon_punctatus
ENSMGAG00000012470	PNLDC1	97	57.534	ENSSSCG00000004046	PNLDC1	99	57.534	Sus_scrofa
ENSMGAG00000012470	PNLDC1	93	75.103	ENSTGUG00000011418	PNLDC1	100	75.103	Taeniopygia_guttata
ENSMGAG00000012470	PNLDC1	98	51.462	ENSTBEG00000009131	PNLDC1	98	51.462	Tupaia_belangeri
ENSMGAG00000012470	PNLDC1	69	57.735	ENSTTRG00000010409	PNLDC1	68	57.735	Tursiops_truncatus
ENSMGAG00000012470	PNLDC1	97	49.709	ENSUAMG00000015783	PNLDC1	95	49.709	Ursus_americanus
ENSMGAG00000012470	PNLDC1	96	54.528	ENSUMAG00000011903	PNLDC1	99	54.528	Ursus_maritimus
ENSMGAG00000012470	PNLDC1	94	58.980	ENSVVUG00000006586	PNLDC1	98	59.588	Vulpes_vulpes