EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000012481 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 10908 bases
Position: chr5:37335273-37346180
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000013149	SRP54	PF00448.22	1.6e-77	1	1
ENSMGAP00000013149	SRP54_N	PF02881.19	6.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000014051	SRP54-201	1521	-	ENSMGAP00000013149	506 (aa)	-	G1NIP1

Gene Model

Click here to download ENSMGAG00000012481's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000012481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000012481	SRP54	100	94.071	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSMGAG00000012481	SRP54	100	90.909	ENSAPOG00000011314	srp54	100	90.909	Acanthochromis_polyacanthus
ENSMGAG00000012481	SRP54	100	94.071	ENSAMEG00000015544	SRP54	100	94.071	Ailuropoda_melanoleuca
ENSMGAG00000012481	SRP54	89	88.914	ENSACIG00000022831	srp54	97	88.914	Amphilophus_citrinellus
ENSMGAG00000012481	SRP54	100	90.909	ENSAOCG00000019401	srp54	100	90.909	Amphiprion_ocellaris
ENSMGAG00000012481	SRP54	100	90.909	ENSAPEG00000001977	srp54	100	90.909	Amphiprion_percula
ENSMGAG00000012481	SRP54	100	91.304	ENSATEG00000013877	srp54	100	91.304	Anabas_testudineus
ENSMGAG00000012481	SRP54	94	94.958	ENSAPLG00000010125	SRP54	95	94.958	Anas_platyrhynchos
ENSMGAG00000012481	SRP54	100	94.269	ENSACAG00000002103	-	100	94.269	Anolis_carolinensis
ENSMGAG00000012481	SRP54	83	98.575	ENSACAG00000010631	-	97	98.575	Anolis_carolinensis
ENSMGAG00000012481	SRP54	65	82.175	ENSACAG00000001124	-	100	82.175	Anolis_carolinensis
ENSMGAG00000012481	SRP54	100	94.071	ENSANAG00000022133	SRP54	100	94.071	Aotus_nancymaae
ENSMGAG00000012481	SRP54	100	91.107	ENSACLG00000015866	srp54	100	91.107	Astatotilapia_calliptera
ENSMGAG00000012481	SRP54	100	91.304	ENSAMXG00000032669	SRP54	100	91.304	Astyanax_mexicanus
ENSMGAG00000012481	SRP54	100	94.071	ENSBTAG00000019085	SRP54	100	94.071	Bos_taurus
ENSMGAG00000012481	SRP54	98	68.600	WBGene00009012	F21D5.7	100	68.600	Caenorhabditis_elegans
ENSMGAG00000012481	SRP54	100	94.071	ENSCJAG00000006581	SRP54	100	94.071	Callithrix_jacchus
ENSMGAG00000012481	SRP54	100	94.071	ENSCAFG00000013331	SRP54	100	94.071	Canis_familiaris
ENSMGAG00000012481	SRP54	100	94.071	ENSCAFG00020023427	SRP54	100	94.071	Canis_lupus_dingo
ENSMGAG00000012481	SRP54	100	94.071	ENSCHIG00000026345	SRP54	100	94.071	Capra_hircus
ENSMGAG00000012481	SRP54	100	94.269	ENSTSYG00000002680	-	100	94.269	Carlito_syrichta
ENSMGAG00000012481	SRP54	94	84.067	ENSTSYG00000035333	-	93	84.067	Carlito_syrichta
ENSMGAG00000012481	SRP54	94	61.789	ENSCAPG00000008780	SRP54	100	61.789	Cavia_aperea
ENSMGAG00000012481	SRP54	100	94.071	ENSCPOG00000003691	SRP54	100	94.071	Cavia_porcellus
ENSMGAG00000012481	SRP54	89	98.568	ENSCCAG00000024179	SRP54	100	98.568	Cebus_capucinus
ENSMGAG00000012481	SRP54	100	94.071	ENSCATG00000034083	SRP54	100	94.071	Cercocebus_atys
ENSMGAG00000012481	SRP54	100	94.071	ENSCLAG00000015076	SRP54	100	94.071	Chinchilla_lanigera
ENSMGAG00000012481	SRP54	100	94.071	ENSCSAG00000015575	SRP54	100	94.071	Chlorocebus_sabaeus
ENSMGAG00000012481	SRP54	95	81.781	ENSCHOG00000008986	SRP54	100	81.781	Choloepus_hoffmanni
ENSMGAG00000012481	SRP54	100	94.862	ENSCPBG00000026195	SRP54	100	94.862	Chrysemys_picta_bellii
ENSMGAG00000012481	SRP54	100	77.075	ENSCING00000007380	-	100	77.075	Ciona_intestinalis
ENSMGAG00000012481	SRP54	100	94.071	ENSCANG00000028532	SRP54	100	94.071	Colobus_angolensis_palliatus
ENSMGAG00000012481	SRP54	100	93.676	ENSCGRG00001009525	-	100	93.676	Cricetulus_griseus_chok1gshd
ENSMGAG00000012481	SRP54	76	92.506	ENSCGRG00000009453	-	89	92.506	Cricetulus_griseus_crigri
ENSMGAG00000012481	SRP54	100	90.119	ENSCSEG00000012392	srp54	100	90.119	Cynoglossus_semilaevis
ENSMGAG00000012481	SRP54	100	90.909	ENSCVAG00000010395	srp54	100	90.909	Cyprinodon_variegatus
ENSMGAG00000012481	SRP54	100	91.304	ENSDARG00000098367	srp54	100	91.304	Danio_rerio
ENSMGAG00000012481	SRP54	100	94.071	ENSDNOG00000032525	SRP54	100	94.071	Dasypus_novemcinctus
ENSMGAG00000012481	SRP54	90	79.295	ENSDORG00000005159	-	98	79.295	Dipodomys_ordii
ENSMGAG00000012481	SRP54	96	73.717	FBgn0010747	Srp54k	98	73.400	Drosophila_melanogaster
ENSMGAG00000012481	SRP54	83	56.938	ENSETEG00000012102	-	99	56.938	Echinops_telfairi
ENSMGAG00000012481	SRP54	100	92.885	ENSETEG00000016307	-	100	92.885	Echinops_telfairi
ENSMGAG00000012481	SRP54	100	83.004	ENSEBUG00000009437	-	100	83.004	Eptatretus_burgeri
ENSMGAG00000012481	SRP54	100	94.071	ENSEASG00005002057	SRP54	100	94.071	Equus_asinus_asinus
ENSMGAG00000012481	SRP54	99	93.800	ENSECAG00000018042	SRP54	98	93.800	Equus_caballus
ENSMGAG00000012481	SRP54	100	77.866	ENSEEUG00000001511	SRP54	100	77.866	Erinaceus_europaeus
ENSMGAG00000012481	SRP54	100	90.316	ENSELUG00000003395	srp54	100	90.316	Esox_lucius
ENSMGAG00000012481	SRP54	100	93.874	ENSFCAG00000032033	SRP54	100	93.874	Felis_catus
ENSMGAG00000012481	SRP54	100	95.257	ENSFALG00000005995	SRP54	100	95.257	Ficedula_albicollis
ENSMGAG00000012481	SRP54	100	94.071	ENSFDAG00000016767	SRP54	100	94.071	Fukomys_damarensis
ENSMGAG00000012481	SRP54	100	90.711	ENSFHEG00000004263	srp54	100	90.711	Fundulus_heteroclitus
ENSMGAG00000012481	SRP54	95	85.000	ENSGMOG00000011391	srp54	100	85.000	Gadus_morhua
ENSMGAG00000012481	SRP54	100	95.257	ENSGALG00000023135	SRP54	100	95.257	Gallus_gallus
ENSMGAG00000012481	SRP54	100	91.107	ENSGAFG00000011586	srp54	100	91.107	Gambusia_affinis
ENSMGAG00000012481	SRP54	100	90.711	ENSGACG00000004181	srp54	100	90.711	Gasterosteus_aculeatus
ENSMGAG00000012481	SRP54	100	94.862	ENSGAGG00000014766	SRP54	100	94.862	Gopherus_agassizii
ENSMGAG00000012481	SRP54	100	94.071	ENSGGOG00000002926	SRP54	100	94.071	Gorilla_gorilla
ENSMGAG00000012481	SRP54	100	91.107	ENSHBUG00000005678	srp54	100	91.107	Haplochromis_burtoni
ENSMGAG00000012481	SRP54	100	94.071	ENSHGLG00000002850	SRP54	100	94.071	Heterocephalus_glaber_female
ENSMGAG00000012481	SRP54	100	65.089	ENSHGLG00100007281	-	100	65.089	Heterocephalus_glaber_male
ENSMGAG00000012481	SRP54	100	94.071	ENSHGLG00100005263	SRP54	100	94.071	Heterocephalus_glaber_male
ENSMGAG00000012481	SRP54	100	89.328	ENSHCOG00000021127	srp54	100	89.328	Hippocampus_comes
ENSMGAG00000012481	SRP54	100	90.909	ENSIPUG00000001420	srp54	100	90.909	Ictalurus_punctatus
ENSMGAG00000012481	SRP54	100	94.071	ENSSTOG00000016023	SRP54	100	94.071	Ictidomys_tridecemlineatus
ENSMGAG00000012481	SRP54	84	74.588	ENSJJAG00000016404	-	96	74.588	Jaculus_jaculus
ENSMGAG00000012481	SRP54	100	88.933	ENSJJAG00000013417	-	100	88.933	Jaculus_jaculus
ENSMGAG00000012481	SRP54	100	90.514	ENSKMAG00000007707	srp54	100	90.514	Kryptolebias_marmoratus
ENSMGAG00000012481	SRP54	100	90.909	ENSLBEG00000021122	srp54	100	90.909	Labrus_bergylta
ENSMGAG00000012481	SRP54	100	90.909	ENSLBEG00000018690	srp54	100	90.909	Labrus_bergylta
ENSMGAG00000012481	SRP54	100	91.502	ENSLACG00000017890	SRP54	100	91.502	Latimeria_chalumnae
ENSMGAG00000012481	SRP54	100	91.897	ENSLOCG00000009440	srp54	100	91.897	Lepisosteus_oculatus
ENSMGAG00000012481	SRP54	100	94.071	ENSLAFG00000012007	SRP54	100	94.071	Loxodonta_africana
ENSMGAG00000012481	SRP54	100	94.071	ENSMFAG00000044371	SRP54	100	94.071	Macaca_fascicularis
ENSMGAG00000012481	SRP54	100	94.071	ENSMMUG00000015073	FAM177A1	100	94.071	Macaca_mulatta
ENSMGAG00000012481	SRP54	100	94.071	ENSMNEG00000006947	SRP54	100	94.071	Macaca_nemestrina
ENSMGAG00000012481	SRP54	100	94.071	ENSMLEG00000042251	SRP54	100	94.071	Mandrillus_leucophaeus
ENSMGAG00000012481	SRP54	100	91.107	ENSMAMG00000004803	srp54	100	91.107	Mastacembelus_armatus
ENSMGAG00000012481	SRP54	100	91.107	ENSMZEG00005027528	srp54	100	91.107	Maylandia_zebra
ENSMGAG00000012481	SRP54	100	93.874	ENSMAUG00000014447	-	100	93.874	Mesocricetus_auratus
ENSMGAG00000012481	SRP54	100	94.071	ENSMICG00000010270	SRP54	100	94.071	Microcebus_murinus
ENSMGAG00000012481	SRP54	84	97.412	ENSMOCG00000000948	-	97	97.412	Microtus_ochrogaster
ENSMGAG00000012481	SRP54	90	87.500	ENSMMOG00000020303	srp54	99	87.500	Mola_mola
ENSMGAG00000012481	SRP54	100	93.874	ENSMODG00000023150	-	100	93.874	Monodelphis_domestica
ENSMGAG00000012481	SRP54	100	93.874	ENSMODG00000012925	-	100	93.874	Monodelphis_domestica
ENSMGAG00000012481	SRP54	88	89.663	ENSMALG00000009163	srp54	98	89.663	Monopterus_albus
ENSMGAG00000012481	SRP54	100	93.874	MGP_CAROLIEiJ_G0017754	-	100	93.874	Mus_caroli
ENSMGAG00000012481	SRP54	100	93.874	ENSMUSG00000112449	Srp54b	100	93.874	Mus_musculus
ENSMGAG00000012481	SRP54	100	93.874	ENSMUSG00000073079	Srp54a	100	93.874	Mus_musculus
ENSMGAG00000012481	SRP54	100	93.083	ENSMUSG00000079108	Srp54c	100	93.083	Mus_musculus
ENSMGAG00000012481	SRP54	100	93.874	MGP_PahariEiJ_G0029510	-	100	93.874	Mus_pahari
ENSMGAG00000012481	SRP54	100	94.071	ENSMPUG00000016302	SRP54	100	94.071	Mustela_putorius_furo
ENSMGAG00000012481	SRP54	100	93.478	ENSMLUG00000008958	SRP54	100	93.478	Myotis_lucifugus
ENSMGAG00000012481	SRP54	100	83.992	ENSNGAG00000019806	-	100	83.992	Nannospalax_galili
ENSMGAG00000012481	SRP54	84	94.353	ENSNBRG00000006000	srp54	97	94.353	Neolamprologus_brichardi
ENSMGAG00000012481	SRP54	100	94.071	ENSNLEG00000003496	SRP54	100	94.071	Nomascus_leucogenys
ENSMGAG00000012481	SRP54	66	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSMGAG00000012481	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSMGAG00000012481	SRP54	100	94.071	ENSODEG00000004865	SRP54	100	94.071	Octodon_degus
ENSMGAG00000012481	SRP54	100	91.107	ENSONIG00000011768	srp54	100	91.107	Oreochromis_niloticus
ENSMGAG00000012481	SRP54	100	94.071	ENSOANG00000014051	SRP54	100	94.071	Ornithorhynchus_anatinus
ENSMGAG00000012481	SRP54	100	93.676	ENSOCUG00000007838	SRP54	100	93.676	Oryctolagus_cuniculus
ENSMGAG00000012481	SRP54	100	91.107	ENSORLG00000010027	srp54	100	91.107	Oryzias_latipes
ENSMGAG00000012481	SRP54	100	91.107	ENSORLG00020001878	srp54	100	91.107	Oryzias_latipes_hni
ENSMGAG00000012481	SRP54	100	91.107	ENSORLG00015021866	srp54	100	91.107	Oryzias_latipes_hsok
ENSMGAG00000012481	SRP54	100	90.909	ENSOMEG00000020952	srp54	100	90.909	Oryzias_melastigma
ENSMGAG00000012481	SRP54	100	94.071	ENSOGAG00000012188	SRP54	100	94.071	Otolemur_garnettii
ENSMGAG00000012481	SRP54	100	94.071	ENSOARG00000007160	SRP54	100	94.071	Ovis_aries
ENSMGAG00000012481	SRP54	100	94.071	ENSPPAG00000017434	SRP54	100	94.071	Pan_paniscus
ENSMGAG00000012481	SRP54	100	92.885	ENSPPRG00000014047	SRP54	100	92.885	Panthera_pardus
ENSMGAG00000012481	SRP54	100	93.874	ENSPTIG00000000744	SRP54	96	93.874	Panthera_tigris_altaica
ENSMGAG00000012481	SRP54	100	94.071	ENSPTRG00000006259	FAM177A1	100	94.071	Pan_troglodytes
ENSMGAG00000012481	SRP54	100	94.071	ENSPANG00000023853	SRP54	100	94.071	Papio_anubis
ENSMGAG00000012481	SRP54	100	90.909	ENSPKIG00000001953	srp54	100	90.909	Paramormyrops_kingsleyae
ENSMGAG00000012481	SRP54	100	94.664	ENSPSIG00000006476	SRP54	100	94.664	Pelodiscus_sinensis
ENSMGAG00000012481	SRP54	91	87.229	ENSPMGG00000004127	srp54	99	87.229	Periophthalmus_magnuspinnatus
ENSMGAG00000012481	SRP54	100	81.818	ENSPEMG00000019634	-	100	81.818	Peromyscus_maniculatus_bairdii
ENSMGAG00000012481	SRP54	100	84.190	ENSPMAG00000006078	-	100	84.190	Petromyzon_marinus
ENSMGAG00000012481	SRP54	100	93.874	ENSPCIG00000016175	SRP54	100	93.874	Phascolarctos_cinereus
ENSMGAG00000012481	SRP54	100	91.107	ENSPFOG00000008870	srp54	100	91.107	Poecilia_formosa
ENSMGAG00000012481	SRP54	100	91.107	ENSPLAG00000009889	srp54	100	91.107	Poecilia_latipinna
ENSMGAG00000012481	SRP54	100	91.107	ENSPMEG00000008601	srp54	100	91.107	Poecilia_mexicana
ENSMGAG00000012481	SRP54	100	91.107	ENSPREG00000004505	srp54	100	91.107	Poecilia_reticulata
ENSMGAG00000012481	SRP54	100	93.281	ENSPPYG00000005739	SRP54	100	93.281	Pongo_abelii
ENSMGAG00000012481	SRP54	100	90.119	ENSPCAG00000006268	SRP54	100	90.119	Procavia_capensis
ENSMGAG00000012481	SRP54	100	92.110	ENSPCOG00000022473	SRP54	100	92.110	Propithecus_coquereli
ENSMGAG00000012481	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSMGAG00000012481	SRP54	100	91.107	ENSPNYG00000009717	srp54	100	91.107	Pundamilia_nyererei
ENSMGAG00000012481	SRP54	100	91.502	ENSPNAG00000008544	srp54	100	91.502	Pygocentrus_nattereri
ENSMGAG00000012481	SRP54	100	94.071	ENSRNOG00000032776	Srp54a	100	94.071	Rattus_norvegicus
ENSMGAG00000012481	SRP54	100	94.071	ENSRROG00000041292	SRP54	100	94.071	Rhinopithecus_roxellana
ENSMGAG00000012481	SRP54	86	51.020	YPR088C	SRP54	95	46.552	Saccharomyces_cerevisiae
ENSMGAG00000012481	SRP54	94	93.697	ENSSBOG00000035145	SRP54	100	93.697	Saimiri_boliviensis_boliviensis
ENSMGAG00000012481	SRP54	68	99.125	ENSSHAG00000000671	SRP54	100	99.125	Sarcophilus_harrisii
ENSMGAG00000012481	SRP54	100	91.502	ENSSFOG00015013920	srp54	100	91.502	Scleropages_formosus
ENSMGAG00000012481	SRP54	100	85.448	ENSSMAG00000002441	srp54	100	85.448	Scophthalmus_maximus
ENSMGAG00000012481	SRP54	100	90.711	ENSSDUG00000018586	srp54	100	90.711	Seriola_dumerili
ENSMGAG00000012481	SRP54	100	90.514	ENSSLDG00000010476	srp54	100	90.514	Seriola_lalandi_dorsalis
ENSMGAG00000012481	SRP54	100	94.071	ENSSARG00000002744	SRP54	100	94.071	Sorex_araneus
ENSMGAG00000012481	SRP54	100	94.862	ENSSPUG00000013101	SRP54	100	94.862	Sphenodon_punctatus
ENSMGAG00000012481	SRP54	100	90.909	ENSSPAG00000002354	srp54	100	90.909	Stegastes_partitus
ENSMGAG00000012481	SRP54	100	94.071	ENSSSCG00000001955	SRP54	100	94.071	Sus_scrofa
ENSMGAG00000012481	SRP54	94	94.958	ENSTGUG00000011945	-	95	94.958	Taeniopygia_guttata
ENSMGAG00000012481	SRP54	100	90.316	ENSTRUG00000007057	srp54	100	90.316	Takifugu_rubripes
ENSMGAG00000012481	SRP54	100	89.921	ENSTNIG00000002589	srp54	100	89.921	Tetraodon_nigroviridis
ENSMGAG00000012481	SRP54	88	86.067	ENSTBEG00000011409	SRP54	99	86.067	Tupaia_belangeri
ENSMGAG00000012481	SRP54	100	83.992	ENSTTRG00000000928	SRP54	100	83.992	Tursiops_truncatus
ENSMGAG00000012481	SRP54	52	89.773	ENSUAMG00000012385	SRP54	100	89.773	Ursus_americanus
ENSMGAG00000012481	SRP54	100	94.071	ENSUMAG00000011234	SRP54	100	94.071	Ursus_maritimus
ENSMGAG00000012481	SRP54	94	93.487	ENSVPAG00000005668	SRP54	100	93.487	Vicugna_pacos
ENSMGAG00000012481	SRP54	100	94.071	ENSVVUG00000019962	SRP54	100	94.071	Vulpes_vulpes
ENSMGAG00000012481	SRP54	100	77.210	ENSXETG00000012290	srp54	100	77.237	Xenopus_tropicalis
ENSMGAG00000012481	SRP54	88	90.112	ENSXCOG00000004658	srp54	96	90.112	Xiphophorus_couchianus
ENSMGAG00000012481	SRP54	100	91.107	ENSXMAG00000018315	srp54	100	91.107	Xiphophorus_maculatus