EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000012815 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 18407 bases
Position: chr1:54306631-54325037
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000013515	zf-C2H2	PF00096.26	5.2e-20	1	2
ENSMGAP00000013515	zf-C2H2	PF00096.26	5.2e-20	2	2
ENSMGAP00000013515	zf-met	PF12874.7	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000014423	PRDM4-201	2391	-	ENSMGAP00000013515	796 (aa)	-	G1NJJ5

Gene Model

Click here to download ENSMGAG00000012815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000012815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000012815	PRDM4	53	34.014	ENSMGAG00000001112	PRDM10	52	34.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000012815	PRDM4	100	78.875	ENSG00000110851	PRDM4	95	95.775	Homo_sapiens
ENSMGAG00000012815	PRDM4	100	79.526	ENSAMEG00000016174	PRDM4	99	79.775	Ailuropoda_melanoleuca
ENSMGAG00000012815	PRDM4	100	86.216	ENSAPLG00000009846	PRDM4	99	86.216	Anas_platyrhynchos
ENSMGAG00000012815	PRDM4	100	78.875	ENSANAG00000024800	PRDM4	99	79.500	Aotus_nancymaae
ENSMGAG00000012815	PRDM4	100	79.500	ENSBTAG00000012999	PRDM4	99	80.000	Bos_taurus
ENSMGAG00000012815	PRDM4	100	85.000	ENSCJAG00000015261	PRDM4	99	79.500	Callithrix_jacchus
ENSMGAG00000012815	PRDM4	100	80.000	ENSCAFG00000001788	PRDM4	99	80.500	Canis_familiaris
ENSMGAG00000012815	PRDM4	100	80.000	ENSCAFG00020004916	PRDM4	99	80.500	Canis_lupus_dingo
ENSMGAG00000012815	PRDM4	100	79.500	ENSCHIG00000019409	PRDM4	99	80.000	Capra_hircus
ENSMGAG00000012815	PRDM4	100	79.500	ENSTSYG00000009248	PRDM4	99	79.653	Carlito_syrichta
ENSMGAG00000012815	PRDM4	100	75.561	ENSCAPG00000013937	PRDM4	99	75.686	Cavia_aperea
ENSMGAG00000012815	PRDM4	100	75.124	ENSCPOG00000022385	PRDM4	100	75.248	Cavia_porcellus
ENSMGAG00000012815	PRDM4	100	79.000	ENSCCAG00000036033	PRDM4	99	79.625	Cebus_capucinus
ENSMGAG00000012815	PRDM4	100	78.625	ENSCATG00000044797	PRDM4	99	79.250	Cercocebus_atys
ENSMGAG00000012815	PRDM4	100	76.456	ENSCLAG00000007545	PRDM4	100	77.076	Chinchilla_lanigera
ENSMGAG00000012815	PRDM4	100	78.875	ENSCSAG00000002896	PRDM4	99	79.500	Chlorocebus_sabaeus
ENSMGAG00000012815	PRDM4	60	93.396	ENSCHOG00000001744	PRDM4	67	93.396	Choloepus_hoffmanni
ENSMGAG00000012815	PRDM4	100	82.957	ENSCPBG00000023187	PRDM4	100	82.957	Chrysemys_picta_bellii
ENSMGAG00000012815	PRDM4	100	79.000	ENSCANG00000021804	PRDM4	99	79.280	Colobus_angolensis_palliatus
ENSMGAG00000012815	PRDM4	100	77.516	ENSCGRG00001015102	-	100	77.516	Cricetulus_griseus_chok1gshd
ENSMGAG00000012815	PRDM4	96	77.062	ENSCGRG00000004044	-	100	77.062	Cricetulus_griseus_crigri
ENSMGAG00000012815	PRDM4	100	78.500	ENSDNOG00000032478	PRDM4	99	78.875	Dasypus_novemcinctus
ENSMGAG00000012815	PRDM4	100	65.332	ENSDORG00000015081	-	100	65.582	Dipodomys_ordii
ENSMGAG00000012815	PRDM4	94	44.789	ENSEBUG00000003775	prdm4	99	44.861	Eptatretus_burgeri
ENSMGAG00000012815	PRDM4	100	79.500	ENSECAG00000015423	PRDM4	99	80.000	Equus_caballus
ENSMGAG00000012815	PRDM4	94	75.665	ENSEEUG00000006569	PRDM4	99	75.665	Erinaceus_europaeus
ENSMGAG00000012815	PRDM4	99	56.395	ENSELUG00000015265	prdm4	99	56.638	Esox_lucius
ENSMGAG00000012815	PRDM4	100	79.500	ENSFCAG00000022478	PRDM4	99	80.000	Felis_catus
ENSMGAG00000012815	PRDM4	100	86.608	ENSFALG00000013342	PRDM4	100	86.483	Ficedula_albicollis
ENSMGAG00000012815	PRDM4	100	89.599	ENSGALG00000012619	PRDM4	99	89.599	Gallus_gallus
ENSMGAG00000012815	PRDM4	100	82.456	ENSGAGG00000002763	PRDM4	95	82.456	Gopherus_agassizii
ENSMGAG00000012815	PRDM4	100	78.750	ENSGGOG00000001244	PRDM4	99	79.375	Gorilla_gorilla
ENSMGAG00000012815	PRDM4	100	77.472	ENSHGLG00000004590	PRDM4	98	77.472	Heterocephalus_glaber_female
ENSMGAG00000012815	PRDM4	100	76.580	ENSHGLG00100007464	PRDM4	100	76.580	Heterocephalus_glaber_male
ENSMGAG00000012815	PRDM4	95	58.515	ENSIPUG00000024162	prdm4	94	58.515	Ictalurus_punctatus
ENSMGAG00000012815	PRDM4	100	79.750	ENSSTOG00000016168	PRDM4	99	80.125	Ictidomys_tridecemlineatus
ENSMGAG00000012815	PRDM4	73	86.792	ENSJJAG00000022448	-	86	84.783	Jaculus_jaculus
ENSMGAG00000012815	PRDM4	100	67.037	ENSLACG00000007452	PRDM4	99	67.407	Latimeria_chalumnae
ENSMGAG00000012815	PRDM4	67	43.860	ENSLOCG00000017092	prdm4	81	54.113	Lepisosteus_oculatus
ENSMGAG00000012815	PRDM4	98	79.520	ENSLAFG00000001483	PRDM4	100	80.025	Loxodonta_africana
ENSMGAG00000012815	PRDM4	100	79.000	ENSMFAG00000041862	PRDM4	99	79.625	Macaca_fascicularis
ENSMGAG00000012815	PRDM4	100	79.000	ENSMMUG00000015550	PRDM4	99	79.625	Macaca_mulatta
ENSMGAG00000012815	PRDM4	100	79.125	ENSMNEG00000032319	PRDM4	99	79.750	Macaca_nemestrina
ENSMGAG00000012815	PRDM4	100	79.125	ENSMLEG00000039607	PRDM4	99	79.750	Mandrillus_leucophaeus
ENSMGAG00000012815	PRDM4	100	78.250	ENSMICG00000007807	PRDM4	99	78.750	Microcebus_murinus
ENSMGAG00000012815	PRDM4	100	77.847	ENSMOCG00000000753	Prdm4	99	78.223	Microtus_ochrogaster
ENSMGAG00000012815	PRDM4	100	78.223	ENSMUSG00000035529	Prdm4	100	78.348	Mus_musculus
ENSMGAG00000012815	PRDM4	100	77.625	MGP_PahariEiJ_G0031398	Prdm4	100	78.125	Mus_pahari
ENSMGAG00000012815	PRDM4	100	78.375	MGP_SPRETEiJ_G0016505	Prdm4	100	78.875	Mus_spretus
ENSMGAG00000012815	PRDM4	100	73.881	ENSMPUG00000012238	PRDM4	99	73.908	Mustela_putorius_furo
ENSMGAG00000012815	PRDM4	100	79.125	ENSMLUG00000000767	PRDM4	99	79.625	Myotis_lucifugus
ENSMGAG00000012815	PRDM4	100	78.125	ENSNGAG00000018627	Prdm4	100	78.625	Nannospalax_galili
ENSMGAG00000012815	PRDM4	100	78.625	ENSNLEG00000006748	PRDM4	99	79.250	Nomascus_leucogenys
ENSMGAG00000012815	PRDM4	90	85.211	ENSMEUG00000004495	PRDM4	89	85.681	Notamacropus_eugenii
ENSMGAG00000012815	PRDM4	82	86.905	ENSOPRG00000010192	PRDM4	81	87.798	Ochotona_princeps
ENSMGAG00000012815	PRDM4	100	76.846	ENSODEG00000014750	PRDM4	99	77.347	Octodon_degus
ENSMGAG00000012815	PRDM4	100	78.784	ENSOANG00000005526	PRDM4	99	78.908	Ornithorhynchus_anatinus
ENSMGAG00000012815	PRDM4	94	79.345	ENSOCUG00000012859	PRDM4	96	79.345	Oryctolagus_cuniculus
ENSMGAG00000012815	PRDM4	100	79.125	ENSOGAG00000011945	PRDM4	100	79.625	Otolemur_garnettii
ENSMGAG00000012815	PRDM4	100	79.125	ENSOARG00000017955	PRDM4	99	79.625	Ovis_aries
ENSMGAG00000012815	PRDM4	100	78.875	ENSPPAG00000038438	PRDM4	99	79.500	Pan_paniscus
ENSMGAG00000012815	PRDM4	100	79.500	ENSPPRG00000004144	PRDM4	99	80.000	Panthera_pardus
ENSMGAG00000012815	PRDM4	100	79.500	ENSPTIG00000005847	PRDM4	99	80.000	Panthera_tigris_altaica
ENSMGAG00000012815	PRDM4	100	78.875	ENSPTRG00000005400	PRDM4	99	79.500	Pan_troglodytes
ENSMGAG00000012815	PRDM4	100	79.000	ENSPANG00000022084	PRDM4	99	79.625	Papio_anubis
ENSMGAG00000012815	PRDM4	99	56.295	ENSPKIG00000000875	prdm4	99	56.325	Paramormyrops_kingsleyae
ENSMGAG00000012815	PRDM4	78	92.818	ENSPSIG00000012066	PRDM4	96	92.818	Pelodiscus_sinensis
ENSMGAG00000012815	PRDM4	100	78.250	ENSPEMG00000014598	Prdm4	100	78.500	Peromyscus_maniculatus_bairdii
ENSMGAG00000012815	PRDM4	100	76.761	ENSPCIG00000009471	PRDM4	99	77.009	Phascolarctos_cinereus
ENSMGAG00000012815	PRDM4	100	78.625	ENSPPYG00000004913	PRDM4	99	79.250	Pongo_abelii
ENSMGAG00000012815	PRDM4	83	93.182	ENSPCAG00000009987	PRDM4	83	93.182	Procavia_capensis
ENSMGAG00000012815	PRDM4	100	78.125	ENSPCOG00000021060	PRDM4	99	78.625	Propithecus_coquereli
ENSMGAG00000012815	PRDM4	100	78.527	ENSPVAG00000001596	PRDM4	99	79.151	Pteropus_vampyrus
ENSMGAG00000012815	PRDM4	100	77.653	ENSRNOG00000004962	Prdm4	100	77.778	Rattus_norvegicus
ENSMGAG00000012815	PRDM4	100	79.125	ENSRBIG00000035488	PRDM4	99	79.750	Rhinopithecus_bieti
ENSMGAG00000012815	PRDM4	100	79.000	ENSRROG00000012779	PRDM4	99	79.625	Rhinopithecus_roxellana
ENSMGAG00000012815	PRDM4	100	84.375	ENSSBOG00000000403	PRDM4	99	79.500	Saimiri_boliviensis_boliviensis
ENSMGAG00000012815	PRDM4	99	59.603	ENSSFOG00015023358	prdm4	98	59.603	Scleropages_formosus
ENSMGAG00000012815	PRDM4	100	79.500	ENSSSCG00000000160	PRDM4	99	80.000	Sus_scrofa
ENSMGAG00000012815	PRDM4	100	86.859	ENSTGUG00000010962	-	99	86.733	Taeniopygia_guttata
ENSMGAG00000012815	PRDM4	74	70.458	ENSTBEG00000001732	PRDM4	84	70.458	Tupaia_belangeri
ENSMGAG00000012815	PRDM4	100	78.750	ENSTTRG00000011056	PRDM4	99	79.250	Tursiops_truncatus
ENSMGAG00000012815	PRDM4	100	79.375	ENSUAMG00000022796	PRDM4	99	79.875	Ursus_americanus
ENSMGAG00000012815	PRDM4	100	79.375	ENSUMAG00000017231	PRDM4	99	79.875	Ursus_maritimus
ENSMGAG00000012815	PRDM4	100	79.500	ENSVPAG00000002215	PRDM4	100	79.875	Vicugna_pacos
ENSMGAG00000012815	PRDM4	100	80.000	ENSVVUG00000023397	PRDM4	99	80.500	Vulpes_vulpes