EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMGAG00000013070 (Gene tree)
Gene ID
100543974
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Meleagris_gallopavo
Status
putative
Strand
Minus strand
Length
27041 bases
Position
chr3:100357047-100384087
Accession
100543974
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMGAP00000013791RRM_1PF00076.225.4e-4412
ENSMGAP00000013791RRM_1PF00076.225.4e-4422
ENSMGAP00000018206RRM_1PF00076.221.3e-3812
ENSMGAP00000018206RRM_1PF00076.221.3e-3822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMGAT00000020581PUF60-2021222-ENSMGAP00000018206364 (aa)-G3URA4
ENSMGAT00000014707PUF60-2011718XM_003205339ENSMGAP00000013791531 (aa)XP_003205387G1NK67
Gene Model
Click here to download ENSMGAG00000013070's gene model file
Pathways
Pathway IDPathway NameSource
mgp03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000013070's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMGAG00000013070PUF605030.387ENSMGAG00000003493TIA17430.387
ENSMGAG00000013070PUF605930.928ENSMGAG00000007727HNRNPAB7935.849
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMGAG00000013070PUF609997.714ENSG00000179950PUF6010098.256Homo_sapiens
ENSMGAG00000013070PUF609590.407ENSAPOG00000001713puf60b9985.958Acanthochromis_polyacanthus
ENSMGAG00000013070PUF609896.360ENSAMEG00000006406PUF609396.360Ailuropoda_melanoleuca
ENSMGAG00000013070PUF609777.351ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSMGAG00000013070PUF609589.535ENSACIG00000021705puf60b10085.988Amphilophus_citrinellus
ENSMGAG00000013070PUF609586.628ENSAOCG00000015558-9981.921Amphiprion_ocellaris
ENSMGAG00000013070PUF609590.407ENSAOCG00000005395puf60b10086.756Amphiprion_ocellaris
ENSMGAG00000013070PUF609380.938ENSAPEG00000001836-9974.144Amphiprion_percula
ENSMGAG00000013070PUF609880.455ENSAPEG00000011923puf60b9980.455Amphiprion_percula
ENSMGAG00000013070PUF609590.116ENSATEG00000001730puf60b9986.148Anabas_testudineus
ENSMGAG00000013070PUF609586.337ENSATEG00000006303-9982.008Anabas_testudineus
ENSMGAG00000013070PUF6098100.000ENSAPLG00000010150PUF60100100.000Anas_platyrhynchos
ENSMGAG00000013070PUF609897.519ENSACAG00000001645PUF609797.519Anolis_carolinensis
ENSMGAG00000013070PUF609997.714ENSANAG00000018626PUF6010098.256Aotus_nancymaae
ENSMGAG00000013070PUF609589.535ENSACLG00000004462puf60b10085.988Astatotilapia_calliptera
ENSMGAG00000013070PUF609587.209ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSMGAG00000013070PUF609884.860ENSAMXG00000036570puf60a10081.636Astyanax_mexicanus
ENSMGAG00000013070PUF609997.905ENSBTAG00000037493PUF609998.276Bos_taurus
ENSMGAG00000013070PUF608250.485WBGene00004389rnp-68650.962Caenorhabditis_elegans
ENSMGAG00000013070PUF609997.905ENSCJAG00000021485PUF609997.905Callithrix_jacchus
ENSMGAG00000013070PUF609898.084ENSCAFG00000001400PUF609398.084Canis_familiaris
ENSMGAG00000013070PUF609998.095ENSCAFG00020018754PUF609998.095Canis_lupus_dingo
ENSMGAG00000013070PUF609898.276ENSCHIG00000001618PUF608798.276Capra_hircus
ENSMGAG00000013070PUF609998.286ENSTSYG00000011912PUF6010098.643Carlito_syrichta
ENSMGAG00000013070PUF609599.128ENSCPOG00000014613PUF609492.776Cavia_porcellus
ENSMGAG00000013070PUF609997.714ENSCCAG00000007744PUF609997.714Cebus_capucinus
ENSMGAG00000013070PUF609997.714ENSCATG00000035405PUF609997.714Cercocebus_atys
ENSMGAG00000013070PUF609898.659ENSCLAG00000009154PUF609398.659Chinchilla_lanigera
ENSMGAG00000013070PUF609798.256ENSCSAG00000008878PUF6010098.256Chlorocebus_sabaeus
ENSMGAG00000013070PUF609899.042ENSCPBG00000005595PUF609899.042Chrysemys_picta_bellii
ENSMGAG00000013070PUF609848.423ENSCING00000008436-9847.866Ciona_intestinalis
ENSMGAG00000013070PUF609358.790ENSCING00000002156-8958.790Ciona_intestinalis
ENSMGAG00000013070PUF609457.022ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSMGAG00000013070PUF609549.206ENSCSAVG00000004765-9749.603Ciona_savignyi
ENSMGAG00000013070PUF609598.547ENSCANG00000041843PUF6010098.082Colobus_angolensis_palliatus
ENSMGAG00000013070PUF609898.084ENSCGRG00001017442Puf609398.084Cricetulus_griseus_chok1gshd
ENSMGAG00000013070PUF609898.084ENSCGRG00000003717Puf609398.084Cricetulus_griseus_crigri
ENSMGAG00000013070PUF609972.693ENSCSEG00000014845-9174.200Cynoglossus_semilaevis
ENSMGAG00000013070PUF609589.826ENSCSEG00000019887puf60b9385.199Cynoglossus_semilaevis
ENSMGAG00000013070PUF609389.971ENSCVAG00000009386puf60b10086.180Cyprinodon_variegatus
ENSMGAG00000013070PUF608980.421ENSCVAG00000001560-9880.421Cyprinodon_variegatus
ENSMGAG00000013070PUF609589.244ENSDARG00000001241puf60b9996.032Danio_rerio
ENSMGAG00000013070PUF609589.174ENSDARG00000032175puf60a9994.043Danio_rerio
ENSMGAG00000013070PUF609583.235ENSDNOG00000043278PUF609083.235Dasypus_novemcinctus
ENSMGAG00000013070PUF609898.467ENSDORG00000004585Puf609598.467Dipodomys_ordii
ENSMGAG00000013070PUF608660.383FBgn0028577hfp9949.466Drosophila_melanogaster
ENSMGAG00000013070PUF609570.437ENSEBUG00000005470-8869.781Eptatretus_burgeri
ENSMGAG00000013070PUF609861.008ENSEBUG00000014291puf60b8564.129Eptatretus_burgeri
ENSMGAG00000013070PUF609998.095ENSEASG00005009695PUF609998.095Equus_asinus_asinus
ENSMGAG00000013070PUF609898.467ENSECAG00000024681PUF609798.467Equus_caballus
ENSMGAG00000013070PUF609590.698ENSELUG00000018443-9985.366Esox_lucius
ENSMGAG00000013070PUF609983.585ENSELUG00000006507puf60b9981.136Esox_lucius
ENSMGAG00000013070PUF609997.714ENSFCAG00000001045PUF6010098.256Felis_catus
ENSMGAG00000013070PUF609886.398ENSFALG00000001136PUF609887.572Ficedula_albicollis
ENSMGAG00000013070PUF609898.659ENSFDAG00000017177PUF609398.659Fukomys_damarensis
ENSMGAG00000013070PUF609379.719ENSFHEG00000021687PUF6010080.573Fundulus_heteroclitus
ENSMGAG00000013070PUF609390.855ENSFHEG00000020046puf60b10086.564Fundulus_heteroclitus
ENSMGAG00000013070PUF609872.180ENSGMOG00000006392puf60b10071.241Gadus_morhua
ENSMGAG00000013070PUF6010097.541ENSGALG00000039901PUF6010097.541Gallus_gallus
ENSMGAG00000013070PUF609390.855ENSGAFG00000021040puf60b10085.797Gambusia_affinis
ENSMGAG00000013070PUF609585.260ENSGAFG00000004334-9979.184Gambusia_affinis
ENSMGAG00000013070PUF609577.616ENSGACG00000001484-10070.349Gasterosteus_aculeatus
ENSMGAG00000013070PUF609873.624ENSGACG00000004717puf60b9873.245Gasterosteus_aculeatus
ENSMGAG00000013070PUF609899.042ENSGAGG00000013289PUF609299.042Gopherus_agassizii
ENSMGAG00000013070PUF609997.905ENSGGOG00000004646PUF609997.905Gorilla_gorilla
ENSMGAG00000013070PUF609587.209ENSHBUG00000009634-9981.132Haplochromis_burtoni
ENSMGAG00000013070PUF609589.535ENSHBUG00000015118puf60b10085.988Haplochromis_burtoni
ENSMGAG00000013070PUF609898.659ENSHGLG00000006111PUF609398.659Heterocephalus_glaber_female
ENSMGAG00000013070PUF609898.659ENSHGLG00100012362PUF609398.659Heterocephalus_glaber_male
ENSMGAG00000013070PUF609275.148ENSHCOG00000000378-9965.414Hippocampus_comes
ENSMGAG00000013070PUF609585.196ENSHCOG00000015541puf60b10081.919Hippocampus_comes
ENSMGAG00000013070PUF609585.511ENSIPUG00000002453puf60a9982.987Ictalurus_punctatus
ENSMGAG00000013070PUF609588.953ENSIPUG00000004660puf60b9978.947Ictalurus_punctatus
ENSMGAG00000013070PUF609898.659ENSSTOG00000025037PUF609498.659Ictidomys_tridecemlineatus
ENSMGAG00000013070PUF609898.276ENSJJAG00000001076Puf609398.276Jaculus_jaculus
ENSMGAG00000013070PUF609390.855ENSKMAG00000016745puf60b10086.564Kryptolebias_marmoratus
ENSMGAG00000013070PUF609581.020ENSKMAG00000010106-10076.119Kryptolebias_marmoratus
ENSMGAG00000013070PUF609884.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSMGAG00000013070PUF607496.310ENSLACG00000005456PUF609991.736Latimeria_chalumnae
ENSMGAG00000013070PUF609991.098ENSLOCG00000010106puf60b9991.098Lepisosteus_oculatus
ENSMGAG00000013070PUF609897.126ENSLAFG00000022929PUF609497.126Loxodonta_africana
ENSMGAG00000013070PUF609997.714ENSMFAG00000043373PUF609998.084Macaca_fascicularis
ENSMGAG00000013070PUF609997.905ENSMMUG00000013558PUF609997.905Macaca_mulatta
ENSMGAG00000013070PUF609997.714ENSMNEG00000031099PUF609997.714Macaca_nemestrina
ENSMGAG00000013070PUF609798.256ENSMLEG00000040009PUF6010098.256Mandrillus_leucophaeus
ENSMGAG00000013070PUF609589.535ENSMAMG00000010394puf60b10084.299Mastacembelus_armatus
ENSMGAG00000013070PUF609588.116ENSMAMG00000019476-9982.075Mastacembelus_armatus
ENSMGAG00000013070PUF609587.209ENSMZEG00005019425-9981.321Maylandia_zebra
ENSMGAG00000013070PUF609589.535ENSMZEG00005018515puf60b10085.988Maylandia_zebra
ENSMGAG00000013070PUF609379.559ENSMAUG00000018549-9579.559Mesocricetus_auratus
ENSMGAG00000013070PUF609598.547ENSMAUG00000014267-9098.634Mesocricetus_auratus
ENSMGAG00000013070PUF609998.095ENSMICG00000012226PUF6010097.909Microcebus_murinus
ENSMGAG00000013070PUF609898.084ENSMOCG00000018780Puf609398.084Microtus_ochrogaster
ENSMGAG00000013070PUF609972.642ENSMMOG00000018059-9977.169Mola_mola
ENSMGAG00000013070PUF609589.826ENSMMOG00000004217puf60b10086.372Mola_mola
ENSMGAG00000013070PUF609898.084ENSMODG00000009161PUF609498.084Monodelphis_domestica
ENSMGAG00000013070PUF609585.465ENSMALG00000000200-9979.362Monopterus_albus
ENSMGAG00000013070PUF609878.558ENSMALG00000006797puf60b9978.558Monopterus_albus
ENSMGAG00000013070PUF609898.276MGP_CAROLIEiJ_G0019910Puf609398.276Mus_caroli
ENSMGAG00000013070PUF609898.276ENSMUSG00000002524Puf609398.276Mus_musculus
ENSMGAG00000013070PUF609898.276MGP_PahariEiJ_G0019920Puf609398.276Mus_pahari
ENSMGAG00000013070PUF609898.276MGP_SPRETEiJ_G0020812Puf609398.276Mus_spretus
ENSMGAG00000013070PUF609898.276ENSMPUG00000008137PUF609298.276Mustela_putorius_furo
ENSMGAG00000013070PUF609897.701ENSMLUG00000000238-9397.701Myotis_lucifugus
ENSMGAG00000013070PUF609990.857ENSMLUG00000013032-9990.857Myotis_lucifugus
ENSMGAG00000013070PUF609898.276ENSNGAG00000000712Puf6010098.450Nannospalax_galili
ENSMGAG00000013070PUF609586.957ENSNBRG00000017223-9981.664Neolamprologus_brichardi
ENSMGAG00000013070PUF609589.535ENSNBRG00000013047puf60b9784.706Neolamprologus_brichardi
ENSMGAG00000013070PUF609997.905ENSNLEG00000002156PUF609997.905Nomascus_leucogenys
ENSMGAG00000013070PUF608099.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSMGAG00000013070PUF609573.176ENSODEG00000015513-9671.567Octodon_degus
ENSMGAG00000013070PUF609695.810ENSODEG00000014024-90100.000Octodon_degus
ENSMGAG00000013070PUF609589.535ENSONIG00000006247puf60b9885.389Oreochromis_niloticus
ENSMGAG00000013070PUF609587.209ENSONIG00000014030-9881.784Oreochromis_niloticus
ENSMGAG00000013070PUF609777.756ENSOANG00000006962PUF609977.950Ornithorhynchus_anatinus
ENSMGAG00000013070PUF609589.244ENSORLG00000012279puf60b10085.221Oryzias_latipes
ENSMGAG00000013070PUF609880.441ENSORLG00000028655-9979.087Oryzias_latipes
ENSMGAG00000013070PUF609589.244ENSORLG00020007333puf6010085.221Oryzias_latipes_hni
ENSMGAG00000013070PUF609881.337ENSORLG00020018144-9978.719Oryzias_latipes_hni
ENSMGAG00000013070PUF609589.244ENSORLG00015007718puf60b10085.086Oryzias_latipes_hsok
ENSMGAG00000013070PUF609881.337ENSORLG00015016833-9879.238Oryzias_latipes_hsok
ENSMGAG00000013070PUF609586.479ENSOMEG00000001643puf60b9983.434Oryzias_melastigma
ENSMGAG00000013070PUF609584.971ENSOMEG00000022185-9979.811Oryzias_melastigma
ENSMGAG00000013070PUF609898.659ENSOGAG00000006259PUF609398.659Otolemur_garnettii
ENSMGAG00000013070PUF609995.066ENSOARG00000016235PUF609995.066Ovis_aries
ENSMGAG00000013070PUF609997.714ENSPPAG00000029933PUF609997.714Pan_paniscus
ENSMGAG00000013070PUF609997.714ENSPPRG00000003257PUF6010098.256Panthera_pardus
ENSMGAG00000013070PUF609995.611ENSPTIG00000009795PUF609995.429Panthera_tigris_altaica
ENSMGAG00000013070PUF609997.714ENSPTRG00000043963-9997.714Pan_troglodytes
ENSMGAG00000013070PUF609997.524ENSPTRG00000020670PUF609997.524Pan_troglodytes
ENSMGAG00000013070PUF609997.714ENSPANG00000021936PUF609997.714Papio_anubis
ENSMGAG00000013070PUF609592.151ENSPKIG00000004295puf60a9992.920Paramormyrops_kingsleyae
ENSMGAG00000013070PUF609592.733ENSPKIG00000012204puf60b10088.462Paramormyrops_kingsleyae
ENSMGAG00000013070PUF609898.659ENSPSIG00000004679PUF609998.659Pelodiscus_sinensis
ENSMGAG00000013070PUF609587.320ENSPMGG00000013444puf60b9984.542Periophthalmus_magnuspinnatus
ENSMGAG00000013070PUF609898.084ENSPEMG00000008820Puf609398.084Peromyscus_maniculatus_bairdii
ENSMGAG00000013070PUF605787.117ENSPMAG00000009884puf60b10087.117Petromyzon_marinus
ENSMGAG00000013070PUF609998.286ENSPCIG00000020270PUF609998.464Phascolarctos_cinereus
ENSMGAG00000013070PUF609584.971ENSPFOG00000011118-9980.455Poecilia_formosa
ENSMGAG00000013070PUF609390.855ENSPFOG00000019217puf60b9982.732Poecilia_formosa
ENSMGAG00000013070PUF609390.855ENSPLAG00000010754puf60b10086.564Poecilia_latipinna
ENSMGAG00000013070PUF609584.971ENSPLAG00000017025-9280.076Poecilia_latipinna
ENSMGAG00000013070PUF609390.855ENSPMEG00000000838puf60b10086.564Poecilia_mexicana
ENSMGAG00000013070PUF609584.682ENSPMEG00000009767-9280.645Poecilia_mexicana
ENSMGAG00000013070PUF609882.070ENSPREG00000005440puf60b9983.734Poecilia_reticulata
ENSMGAG00000013070PUF609596.512ENSPPYG00000018951-9596.403Pongo_abelii
ENSMGAG00000013070PUF609598.837ENSPCAG00000014837PUF6010098.321Procavia_capensis
ENSMGAG00000013070PUF609997.905ENSPCOG00000027981PUF609998.276Propithecus_coquereli
ENSMGAG00000013070PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSMGAG00000013070PUF609587.209ENSPNYG00000004273-9981.321Pundamilia_nyererei
ENSMGAG00000013070PUF609589.535ENSPNYG00000002556puf60b10085.988Pundamilia_nyererei
ENSMGAG00000013070PUF609883.144ENSPNAG00000019909puf60a9982.609Pygocentrus_nattereri
ENSMGAG00000013070PUF609582.267ENSPNAG00000019415puf60b9075.000Pygocentrus_nattereri
ENSMGAG00000013070PUF609898.276ENSRNOG00000009960Puf609398.276Rattus_norvegicus
ENSMGAG00000013070PUF609997.905ENSRBIG00000035274PUF609997.905Rhinopithecus_bieti
ENSMGAG00000013070PUF609997.714ENSRROG00000029360PUF609998.084Rhinopithecus_roxellana
ENSMGAG00000013070PUF609896.935ENSSBOG00000027089PUF609896.935Saimiri_boliviensis_boliviensis
ENSMGAG00000013070PUF609599.128ENSSHAG00000006668PUF609097.660Sarcophilus_harrisii
ENSMGAG00000013070PUF609982.162ENSSFOG00015019371puf60a9887.928Scleropages_formosus
ENSMGAG00000013070PUF609592.151ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSMGAG00000013070PUF607694.224ENSSMAG00000016381puf60b7492.281Scophthalmus_maximus
ENSMGAG00000013070PUF609588.081ENSSDUG00000007048-9880.266Seriola_dumerili
ENSMGAG00000013070PUF609884.387ENSSDUG00000009935puf60b9985.051Seriola_dumerili
ENSMGAG00000013070PUF609590.116ENSSLDG00000024011puf60b10084.486Seriola_lalandi_dorsalis
ENSMGAG00000013070PUF609583.908ENSSLDG00000007366-9981.214Seriola_lalandi_dorsalis
ENSMGAG00000013070PUF609684.615ENSSPUG00000013518PUF609684.615Sphenodon_punctatus
ENSMGAG00000013070PUF609587.791ENSSPAG00000020285-10083.333Stegastes_partitus
ENSMGAG00000013070PUF609983.425ENSSPAG00000012144puf60b10084.673Stegastes_partitus
ENSMGAG00000013070PUF609897.893ENSSSCG00000038800PUF609994.286Sus_scrofa
ENSMGAG00000013070PUF609895.785ENSTGUG00000012797-10095.785Taeniopygia_guttata
ENSMGAG00000013070PUF6057100.000ENSTGUG00000016423-100100.000Taeniopygia_guttata
ENSMGAG00000013070PUF609580.580ENSTRUG00000008843-10078.101Takifugu_rubripes
ENSMGAG00000013070PUF609589.535ENSTRUG00000005420puf60b10083.178Takifugu_rubripes
ENSMGAG00000013070PUF609589.535ENSTNIG00000013675puf60b9984.820Tetraodon_nigroviridis
ENSMGAG00000013070PUF609583.188ENSTNIG00000003069-9978.352Tetraodon_nigroviridis
ENSMGAG00000013070PUF607778.319ENSTBEG00000001899-10080.636Tupaia_belangeri
ENSMGAG00000013070PUF608198.893ENSTBEG00000002751-9996.284Tupaia_belangeri
ENSMGAG00000013070PUF609797.868ENSTTRG00000017088PUF6010097.868Tursiops_truncatus
ENSMGAG00000013070PUF609998.095ENSUAMG00000024917PUF609998.095Ursus_americanus
ENSMGAG00000013070PUF609597.965ENSUMAG00000000272PUF609393.103Ursus_maritimus
ENSMGAG00000013070PUF609898.467ENSVVUG00000022527PUF6010098.643Vulpes_vulpes
ENSMGAG00000013070PUF609894.423ENSXETG00000012469puf609894.423Xenopus_tropicalis
ENSMGAG00000013070PUF609782.150ENSXCOG00000012355puf60b10083.301Xiphophorus_couchianus
ENSMGAG00000013070PUF609581.214ENSXMAG00000010507-9878.185Xiphophorus_maculatus
ENSMGAG00000013070PUF609390.855ENSXMAG00000001862puf60b10086.564Xiphophorus_maculatus

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