EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000013111 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 32499 bases
Position: chr4:69455243-69487741
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000013844	RNA_pol_Rpb1_5	PF04998.17	1e-93	1	1
ENSMGAP00000013844	RNA_pol_Rpb1_4	PF05000.17	1.2e-23	1	1
ENSMGAP00000013844	RNA_pol_Rpb1_2	PF00623.20	7.3e-69	1	1
ENSMGAP00000013844	RNA_pol_Rpb1_3	PF04983.18	1.8e-38	1	1
ENSMGAP00000013844	RNA_pol_Rpb1_1	PF04997.12	3.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000014762	POLR1A-201	5203	-	ENSMGAP00000013844	1714 (aa)	-	G1NKB3

Gene Model

Click here to download ENSMGAG00000013111's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000013111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000013111	POLR1A	99	69.217	ENSG00000068654	POLR1A	99	69.217	Homo_sapiens
ENSMGAG00000013111	POLR1A	68	67.371	ENSAPOG00000017945	polr1a	99	67.399	Acanthochromis_polyacanthus
ENSMGAG00000013111	POLR1A	99	69.200	ENSAMEG00000005807	POLR1A	100	74.385	Ailuropoda_melanoleuca
ENSMGAG00000013111	POLR1A	95	64.710	ENSACIG00000022147	polr1a	99	64.143	Amphilophus_citrinellus
ENSMGAG00000013111	POLR1A	99	62.579	ENSAOCG00000017336	polr1a	99	65.466	Amphiprion_ocellaris
ENSMGAG00000013111	POLR1A	99	62.693	ENSAPEG00000016105	polr1a	97	67.857	Amphiprion_percula
ENSMGAG00000013111	POLR1A	99	63.246	ENSATEG00000016773	polr1a	99	62.796	Anabas_testudineus
ENSMGAG00000013111	POLR1A	85	88.587	ENSAPLG00000013871	POLR1A	100	88.503	Anas_platyrhynchos
ENSMGAG00000013111	POLR1A	99	69.467	ENSACAG00000012141	POLR1A	99	68.609	Anolis_carolinensis
ENSMGAG00000013111	POLR1A	99	69.356	ENSANAG00000033927	POLR1A	99	69.066	Aotus_nancymaae
ENSMGAG00000013111	POLR1A	99	59.467	ENSACLG00000020541	polr1a	99	59.536	Astatotilapia_calliptera
ENSMGAG00000013111	POLR1A	99	69.271	ENSBTAG00000006481	POLR1A	99	69.155	Bos_taurus
ENSMGAG00000013111	POLR1A	99	37.937	WBGene00012999	rpoa-1	77	59.783	Caenorhabditis_elegans
ENSMGAG00000013111	POLR1A	99	69.142	ENSCJAG00000019547	POLR1A	99	68.910	Callithrix_jacchus
ENSMGAG00000013111	POLR1A	99	69.378	ENSCAFG00000007613	POLR1A	99	69.262	Canis_familiaris
ENSMGAG00000013111	POLR1A	99	69.378	ENSCAFG00020014752	POLR1A	95	75.873	Canis_lupus_dingo
ENSMGAG00000013111	POLR1A	99	69.347	ENSCHIG00000018204	POLR1A	99	69.231	Capra_hircus
ENSMGAG00000013111	POLR1A	99	68.913	ENSTSYG00000002761	POLR1A	99	68.913	Carlito_syrichta
ENSMGAG00000013111	POLR1A	97	65.793	ENSCAPG00000010132	POLR1A	99	65.793	Cavia_aperea
ENSMGAG00000013111	POLR1A	99	69.186	ENSCPOG00000012350	POLR1A	99	69.186	Cavia_porcellus
ENSMGAG00000013111	POLR1A	99	69.101	ENSCCAG00000019839	POLR1A	99	68.870	Cebus_capucinus
ENSMGAG00000013111	POLR1A	99	69.101	ENSCATG00000029786	POLR1A	99	69.101	Cercocebus_atys
ENSMGAG00000013111	POLR1A	99	68.837	ENSCLAG00000005187	POLR1A	99	68.721	Chinchilla_lanigera
ENSMGAG00000013111	POLR1A	99	68.812	ENSCSAG00000016251	POLR1A	99	69.217	Chlorocebus_sabaeus
ENSMGAG00000013111	POLR1A	100	77.449	ENSCPBG00000001115	POLR1A	100	77.333	Chrysemys_picta_bellii
ENSMGAG00000013111	POLR1A	99	45.315	ENSCSAVG00000007184	-	100	44.151	Ciona_savignyi
ENSMGAG00000013111	POLR1A	99	66.338	ENSCANG00000031785	POLR1A	99	66.396	Colobus_angolensis_palliatus
ENSMGAG00000013111	POLR1A	96	71.270	ENSCGRG00001006651	Polr1a	99	71.270	Cricetulus_griseus_chok1gshd
ENSMGAG00000013111	POLR1A	60	66.504	ENSCGRG00000010834	Polr1a	99	67.347	Cricetulus_griseus_crigri
ENSMGAG00000013111	POLR1A	99	58.983	ENSCSEG00000020190	polr1a	99	58.728	Cynoglossus_semilaevis
ENSMGAG00000013111	POLR1A	99	60.490	ENSCVAG00000020941	polr1a	99	60.980	Cyprinodon_variegatus
ENSMGAG00000013111	POLR1A	99	63.910	ENSDARG00000098375	polr1a	99	63.836	Danio_rerio
ENSMGAG00000013111	POLR1A	99	65.761	ENSDNOG00000010829	POLR1A	99	65.741	Dasypus_novemcinctus
ENSMGAG00000013111	POLR1A	99	67.783	ENSDORG00000008298	Polr1a	99	68.111	Dipodomys_ordii
ENSMGAG00000013111	POLR1A	79	43.851	FBgn0019938	RpI1	99	41.846	Drosophila_melanogaster
ENSMGAG00000013111	POLR1A	72	87.097	ENSETEG00000000412	-	71	87.097	Echinops_telfairi
ENSMGAG00000013111	POLR1A	86	65.625	ENSEBUG00000005667	-	99	65.625	Eptatretus_burgeri
ENSMGAG00000013111	POLR1A	99	69.722	ENSEASG00005001625	POLR1A	99	69.664	Equus_asinus_asinus
ENSMGAG00000013111	POLR1A	95	74.922	ENSECAG00000036306	-	99	74.922	Equus_caballus
ENSMGAG00000013111	POLR1A	95	74.922	ENSECAG00000010092	POLR1A	99	74.922	Equus_caballus
ENSMGAG00000013111	POLR1A	96	84.252	ENSECAG00000030510	-	99	74.922	Equus_caballus
ENSMGAG00000013111	POLR1A	81	84.921	ENSEEUG00000000676	POLR1A	81	84.921	Erinaceus_europaeus
ENSMGAG00000013111	POLR1A	99	64.398	ENSELUG00000012769	polr1a	98	64.360	Esox_lucius
ENSMGAG00000013111	POLR1A	99	69.570	ENSFCAG00000008966	POLR1A	99	69.454	Felis_catus
ENSMGAG00000013111	POLR1A	99	84.742	ENSFALG00000010082	POLR1A	100	84.624	Ficedula_albicollis
ENSMGAG00000013111	POLR1A	99	68.994	ENSFDAG00000013726	POLR1A	99	68.990	Fukomys_damarensis
ENSMGAG00000013111	POLR1A	99	59.884	ENSFHEG00000005996	polr1a	99	59.388	Fundulus_heteroclitus
ENSMGAG00000013111	POLR1A	99	58.697	ENSGMOG00000002230	polr1a	99	58.324	Gadus_morhua
ENSMGAG00000013111	POLR1A	89	95.817	ENSGALG00000038160	-	98	95.817	Gallus_gallus
ENSMGAG00000013111	POLR1A	99	61.601	ENSGAFG00000015266	polr1a	99	61.494	Gambusia_affinis
ENSMGAG00000013111	POLR1A	99	61.768	ENSGACG00000018791	polr1a	99	59.966	Gasterosteus_aculeatus
ENSMGAG00000013111	POLR1A	89	77.344	ENSGAGG00000004984	-	96	83.459	Gopherus_agassizii
ENSMGAG00000013111	POLR1A	99	69.333	ENSGGOG00000001788	POLR1A	99	69.333	Gorilla_gorilla
ENSMGAG00000013111	POLR1A	91	63.831	ENSHBUG00000020021	polr1a	98	63.831	Haplochromis_burtoni
ENSMGAG00000013111	POLR1A	99	69.383	ENSHGLG00000006334	POLR1A	99	68.476	Heterocephalus_glaber_female
ENSMGAG00000013111	POLR1A	99	69.182	ENSHGLG00100006614	POLR1A	99	68.279	Heterocephalus_glaber_male
ENSMGAG00000013111	POLR1A	99	59.781	ENSHCOG00000003345	polr1a	99	59.734	Hippocampus_comes
ENSMGAG00000013111	POLR1A	99	64.563	ENSIPUG00000013174	polr1a	99	64.497	Ictalurus_punctatus
ENSMGAG00000013111	POLR1A	99	68.583	ENSSTOG00000012580	POLR1A	99	68.641	Ictidomys_tridecemlineatus
ENSMGAG00000013111	POLR1A	99	69.101	ENSJJAG00000013113	Polr1a	99	68.870	Jaculus_jaculus
ENSMGAG00000013111	POLR1A	99	63.351	ENSKMAG00000007399	polr1a	99	63.219	Kryptolebias_marmoratus
ENSMGAG00000013111	POLR1A	94	66.385	ENSLBEG00000015401	polr1a	99	65.132	Labrus_bergylta
ENSMGAG00000013111	POLR1A	53	73.776	ENSLACG00000003218	polr1a	99	73.776	Latimeria_chalumnae
ENSMGAG00000013111	POLR1A	99	67.477	ENSLOCG00000010881	polr1a	99	66.954	Lepisosteus_oculatus
ENSMGAG00000013111	POLR1A	99	69.275	ENSLAFG00000014948	POLR1A	99	69.142	Loxodonta_africana
ENSMGAG00000013111	POLR1A	99	69.333	ENSMFAG00000046097	POLR1A	99	69.217	Macaca_fascicularis
ENSMGAG00000013111	POLR1A	99	69.333	ENSMMUG00000015815	POLR1A	99	69.217	Macaca_mulatta
ENSMGAG00000013111	POLR1A	99	69.333	ENSMNEG00000043313	POLR1A	99	69.217	Macaca_nemestrina
ENSMGAG00000013111	POLR1A	99	68.348	ENSMLEG00000042428	POLR1A	99	68.754	Mandrillus_leucophaeus
ENSMGAG00000013111	POLR1A	99	63.462	ENSMAMG00000016565	polr1a	99	63.415	Mastacembelus_armatus
ENSMGAG00000013111	POLR1A	99	63.252	ENSMZEG00005004915	polr1a	99	63.326	Maylandia_zebra
ENSMGAG00000013111	POLR1A	92	69.090	ENSMAUG00000008497	Polr1a	99	69.265	Mesocricetus_auratus
ENSMGAG00000013111	POLR1A	99	68.638	ENSMICG00000000757	POLR1A	99	68.696	Microcebus_murinus
ENSMGAG00000013111	POLR1A	99	69.066	ENSMOCG00000000122	Polr1a	99	69.441	Microtus_ochrogaster
ENSMGAG00000013111	POLR1A	99	62.151	ENSMMOG00000010216	polr1a	99	62.029	Mola_mola
ENSMGAG00000013111	POLR1A	99	67.837	ENSMODG00000009335	POLR1A	80	72.845	Monodelphis_domestica
ENSMGAG00000013111	POLR1A	99	62.929	ENSMALG00000013363	polr1a	99	62.929	Monopterus_albus
ENSMGAG00000013111	POLR1A	99	68.623	MGP_CAROLIEiJ_G0028494	Polr1a	99	68.565	Mus_caroli
ENSMGAG00000013111	POLR1A	99	68.739	ENSMUSG00000049553	Polr1a	99	68.681	Mus_musculus
ENSMGAG00000013111	POLR1A	99	68.797	MGP_PahariEiJ_G0022230	Polr1a	99	68.739	Mus_pahari
ENSMGAG00000013111	POLR1A	99	67.332	MGP_SPRETEiJ_G0029499	Polr1a	99	67.886	Mus_spretus
ENSMGAG00000013111	POLR1A	99	69.628	ENSMPUG00000009135	POLR1A	99	69.454	Mustela_putorius_furo
ENSMGAG00000013111	POLR1A	99	69.155	ENSMLUG00000015723	POLR1A	99	69.391	Myotis_lucifugus
ENSMGAG00000013111	POLR1A	99	68.692	ENSNGAG00000017907	Polr1a	99	69.142	Nannospalax_galili
ENSMGAG00000013111	POLR1A	99	63.252	ENSNBRG00000000519	polr1a	99	63.384	Neolamprologus_brichardi
ENSMGAG00000013111	POLR1A	99	67.436	ENSNLEG00000002264	POLR1A	99	67.436	Nomascus_leucogenys
ENSMGAG00000013111	POLR1A	75	88.889	ENSMEUG00000011665	-	75	88.889	Notamacropus_eugenii
ENSMGAG00000013111	POLR1A	98	64.387	ENSOPRG00000008269	POLR1A	99	64.328	Ochotona_princeps
ENSMGAG00000013111	POLR1A	99	69.302	ENSODEG00000003542	POLR1A	99	69.244	Octodon_degus
ENSMGAG00000013111	POLR1A	99	63.268	ENSONIG00000015895	polr1a	99	63.210	Oreochromis_niloticus
ENSMGAG00000013111	POLR1A	99	69.861	ENSOCUG00000010138	POLR1A	99	69.540	Oryctolagus_cuniculus
ENSMGAG00000013111	POLR1A	99	63.304	ENSORLG00000008753	polr1a	99	63.143	Oryzias_latipes
ENSMGAG00000013111	POLR1A	99	62.267	ENSORLG00020020726	polr1a	99	62.347	Oryzias_latipes_hni
ENSMGAG00000013111	POLR1A	95	74.444	ENSORLG00015016071	polr1a	98	74.444	Oryzias_latipes_hsok
ENSMGAG00000013111	POLR1A	99	69.258	ENSOGAG00000004031	POLR1A	99	69.084	Otolemur_garnettii
ENSMGAG00000013111	POLR1A	99	69.119	ENSOARG00000020601	POLR1A	99	69.119	Ovis_aries
ENSMGAG00000013111	POLR1A	99	69.333	ENSPPAG00000042450	POLR1A	99	69.333	Pan_paniscus
ENSMGAG00000013111	POLR1A	99	69.512	ENSPPRG00000006702	POLR1A	99	69.396	Panthera_pardus
ENSMGAG00000013111	POLR1A	99	69.097	ENSPTIG00000018783	POLR1A	99	68.981	Panthera_tigris_altaica
ENSMGAG00000013111	POLR1A	99	68.786	ENSPTRG00000012147	POLR1A	99	69.449	Pan_troglodytes
ENSMGAG00000013111	POLR1A	99	69.043	ENSPANG00000025908	POLR1A	99	69.043	Papio_anubis
ENSMGAG00000013111	POLR1A	94	72.143	ENSPKIG00000005468	polr1a	99	72.143	Paramormyrops_kingsleyae
ENSMGAG00000013111	POLR1A	63	74.009	ENSPSIG00000009321	-	100	73.801	Pelodiscus_sinensis
ENSMGAG00000013111	POLR1A	55	66.773	ENSPMGG00000009718	polr1a	95	66.773	Periophthalmus_magnuspinnatus
ENSMGAG00000013111	POLR1A	99	69.570	ENSPEMG00000022224	Polr1a	99	69.570	Peromyscus_maniculatus_bairdii
ENSMGAG00000013111	POLR1A	95	69.077	ENSPCIG00000004222	POLR1A	99	68.427	Phascolarctos_cinereus
ENSMGAG00000013111	POLR1A	99	61.921	ENSPFOG00000005025	polr1a	99	62.117	Poecilia_formosa
ENSMGAG00000013111	POLR1A	99	61.853	ENSPLAG00000021389	polr1a	99	62.362	Poecilia_latipinna
ENSMGAG00000013111	POLR1A	99	60.731	ENSPMEG00000006463	polr1a	99	60.960	Poecilia_mexicana
ENSMGAG00000013111	POLR1A	99	62.637	ENSPREG00000002389	polr1a	99	62.550	Poecilia_reticulata
ENSMGAG00000013111	POLR1A	99	68.580	ENSPPYG00000012217	POLR1A	99	68.580	Pongo_abelii
ENSMGAG00000013111	POLR1A	87	69.585	ENSPCAG00000011582	POLR1A	87	69.585	Procavia_capensis
ENSMGAG00000013111	POLR1A	99	69.217	ENSPCOG00000026987	POLR1A	99	69.275	Propithecus_coquereli
ENSMGAG00000013111	POLR1A	95	68.382	ENSPVAG00000012674	POLR1A	95	68.235	Pteropus_vampyrus
ENSMGAG00000013111	POLR1A	99	63.194	ENSPNYG00000000026	polr1a	99	63.268	Pundamilia_nyererei
ENSMGAG00000013111	POLR1A	99	65.116	ENSPNAG00000019223	polr1a	99	67.103	Pygocentrus_nattereri
ENSMGAG00000013111	POLR1A	99	69.444	ENSRNOG00000009545	Polr1a	99	69.387	Rattus_norvegicus
ENSMGAG00000013111	POLR1A	99	68.786	ENSRBIG00000028335	POLR1A	99	68.928	Rhinopithecus_bieti
ENSMGAG00000013111	POLR1A	99	68.728	ENSRROG00000031473	POLR1A	99	68.870	Rhinopithecus_roxellana
ENSMGAG00000013111	POLR1A	99	37.578	YOR341W	RPA190	99	37.634	Saccharomyces_cerevisiae
ENSMGAG00000013111	POLR1A	99	68.910	ENSSBOG00000030262	POLR1A	99	68.794	Saimiri_boliviensis_boliviensis
ENSMGAG00000013111	POLR1A	99	64.430	ENSSHAG00000014739	POLR1A	99	64.430	Sarcophilus_harrisii
ENSMGAG00000013111	POLR1A	99	65.145	ENSSFOG00015019716	polr1a	99	65.135	Scleropages_formosus
ENSMGAG00000013111	POLR1A	99	63.289	ENSSMAG00000014342	polr1a	99	63.173	Scophthalmus_maximus
ENSMGAG00000013111	POLR1A	99	63.789	ENSSDUG00000014631	polr1a	99	63.767	Seriola_dumerili
ENSMGAG00000013111	POLR1A	99	61.910	ENSSLDG00000024095	polr1a	99	61.957	Seriola_lalandi_dorsalis
ENSMGAG00000013111	POLR1A	71	84.043	ENSSARG00000003136	-	75	84.043	Sorex_araneus
ENSMGAG00000013111	POLR1A	94	77.037	ENSSPUG00000004215	POLR1A	98	77.071	Sphenodon_punctatus
ENSMGAG00000013111	POLR1A	62	72.120	ENSSPAG00000016341	polr1a	93	72.120	Stegastes_partitus
ENSMGAG00000013111	POLR1A	83	72.727	ENSSSCG00000008226	POLR1A	99	72.632	Sus_scrofa
ENSMGAG00000013111	POLR1A	99	83.549	ENSTGUG00000010704	POLR1A	99	83.118	Taeniopygia_guttata
ENSMGAG00000013111	POLR1A	99	60.507	ENSTRUG00000002210	polr1a	97	63.608	Takifugu_rubripes
ENSMGAG00000013111	POLR1A	99	58.124	ENSTNIG00000010116	polr1a	99	58.338	Tetraodon_nigroviridis
ENSMGAG00000013111	POLR1A	70	85.398	ENSTBEG00000008646	POLR1A	69	85.398	Tupaia_belangeri
ENSMGAG00000013111	POLR1A	99	66.628	ENSTTRG00000008597	POLR1A	99	66.628	Tursiops_truncatus
ENSMGAG00000013111	POLR1A	68	69.381	ENSUAMG00000012158	-	94	69.211	Ursus_americanus
ENSMGAG00000013111	POLR1A	99	68.837	ENSUMAG00000006700	POLR1A	97	74.868	Ursus_maritimus
ENSMGAG00000013111	POLR1A	99	69.262	ENSVVUG00000001245	POLR1A	99	69.146	Vulpes_vulpes
ENSMGAG00000013111	POLR1A	99	64.928	ENSXETG00000001952	polr1a	99	67.577	Xenopus_tropicalis
ENSMGAG00000013111	POLR1A	99	62.037	ENSXMAG00000004032	polr1a	99	62.168	Xiphophorus_maculatus