EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000013165 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 5589 bases
Position: chr4:69761490-69767078
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000013891	zf-met	PF12874.7	4.5e-27	1	4
ENSMGAP00000013891	zf-met	PF12874.7	4.5e-27	2	4
ENSMGAP00000013891	zf-met	PF12874.7	4.5e-27	3	4
ENSMGAP00000013891	zf-met	PF12874.7	4.5e-27	4	4
ENSMGAP00000019350	zf-met	PF12874.7	5e-27	1	4
ENSMGAP00000019350	zf-met	PF12874.7	5e-27	2	4
ENSMGAP00000019350	zf-met	PF12874.7	5e-27	3	4
ENSMGAP00000019350	zf-met	PF12874.7	5e-27	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000014810	-	813	-	ENSMGAP00000013891	271 (aa)	-	G1NKE8
ENSMGAT00000020734	-	831	-	ENSMGAP00000019350	277 (aa)	-	G3UU92

Gene Model

Click here to download ENSMGAG00000013165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000013165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000013165	-	87	38.430	ENSMGAG00000002288	ZMAT4	94	38.430
ENSMGAG00000013165	-	66	31.579	ENSMGAG00000004440	ZNF346	64	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000013165	-	99	44.697	ENSAMEG00000004976	ZMAT1	54	41.343	Ailuropoda_melanoleuca
ENSMGAG00000013165	-	99	50.000	ENSCPBG00000001356	ZMAT1	50	48.136	Chrysemys_picta_bellii
ENSMGAG00000013165	-	89	73.047	ENSGALG00000046009	-	50	73.047	Gallus_gallus
ENSMGAG00000013165	-	99	50.883	ENSGAGG00000002326	ZMAT1	50	50.883	Gopherus_agassizii
ENSMGAG00000013165	-	91	47.104	ENSMODG00000009552	-	100	47.876	Monodelphis_domestica
ENSMGAG00000013165	-	68	57.547	ENSOANG00000010354	-	90	57.692	Ornithorhynchus_anatinus
ENSMGAG00000013165	-	92	45.977	ENSSHAG00000011087	-	91	44.275	Sarcophilus_harrisii
ENSMGAG00000013165	-	100	44.056	ENSXETG00000001949	krcc1	53	44.056	Xenopus_tropicalis