EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMGAG00000013995 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Meleagris_gallopavo
Status
putative
Strand
Plus strand
Length
16752 bases
Position
chr2:101050543-101067294
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMGAP00000014808CPSF73-100_CPF11718.88.4e-5411
ENSMGAP00000014808Beta-CaspPF10996.82.5e-3411
ENSMGAP00000014808Lactamase_BPF00753.276.1e-1911
ENSMGAP00000014808RMMBLPF07521.128.6e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMGAT00000015748CPSF3-2012002-ENSMGAP00000014808667 (aa)-G1NMJ4
Gene Model
Click here to download ENSMGAG00000013995's gene model file
Pathways
Pathway IDPathway NameSource
mgp03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000013995's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMGAG00000013995CPSF37238.800ENSMGAG00000002879INTS118138.800
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMGAG00000013995CPSF310095.202ENSG00000119203CPSF3100100.000Homo_sapiens
ENSMGAG00000013995CPSF37397.113ENSAPOG00000012241CPSF38996.368Acanthochromis_polyacanthus
ENSMGAG00000013995CPSF310085.607ENSAPOG00000022087cpsf39785.607Acanthochromis_polyacanthus
ENSMGAG00000013995CPSF310095.052ENSAMEG00000008493CPSF39895.052Ailuropoda_melanoleuca
ENSMGAG00000013995CPSF39482.222ENSACIG00000009846cpsf39982.222Amphilophus_citrinellus
ENSMGAG00000013995CPSF39485.873ENSACIG00000023663CPSF39985.873Amphilophus_citrinellus
ENSMGAG00000013995CPSF310085.457ENSAOCG00000022056cpsf39785.457Amphiprion_ocellaris
ENSMGAG00000013995CPSF39987.387ENSAOCG00000010077CPSF39687.387Amphiprion_ocellaris
ENSMGAG00000013995CPSF310085.607ENSAPEG00000019526cpsf39686.792Amphiprion_percula
ENSMGAG00000013995CPSF39987.387ENSAPEG00000021167CPSF39687.387Amphiprion_percula
ENSMGAG00000013995CPSF39982.733ENSATEG00000014525CPSF39682.733Anabas_testudineus
ENSMGAG00000013995CPSF39985.414ENSATEG00000003959cpsf39982.643Anabas_testudineus
ENSMGAG00000013995CPSF310097.601ENSAPLG00000006941CPSF39897.601Anas_platyrhynchos
ENSMGAG00000013995CPSF39593.071ENSACAG00000001759CPSF39993.071Anolis_carolinensis
ENSMGAG00000013995CPSF310089.205ENSANAG00000031254CPSF39989.205Aotus_nancymaae
ENSMGAG00000013995CPSF39485.714ENSACLG00000018846CPSF39985.714Astatotilapia_calliptera
ENSMGAG00000013995CPSF310085.457ENSACLG00000014484cpsf39985.457Astatotilapia_calliptera
ENSMGAG00000013995CPSF39987.387ENSAMXG00000004786cpsf39984.579Astyanax_mexicanus
ENSMGAG00000013995CPSF310095.202ENSBTAG00000019735CPSF39895.202Bos_taurus
ENSMGAG00000013995CPSF39458.411WBGene00013460cpsf-39058.411Caenorhabditis_elegans
ENSMGAG00000013995CPSF310094.903ENSCJAG00000006276CPSF39894.903Callithrix_jacchus
ENSMGAG00000013995CPSF310095.052ENSCAFG00000003375CPSF39395.052Canis_familiaris
ENSMGAG00000013995CPSF39096.678ENSCAFG00020026799CPSF39796.678Canis_lupus_dingo
ENSMGAG00000013995CPSF310095.202ENSCHIG00000013973CPSF39895.202Capra_hircus
ENSMGAG00000013995CPSF310095.202ENSTSYG00000002967CPSF39895.202Carlito_syrichta
ENSMGAG00000013995CPSF310094.153ENSCAPG00000013851CPSF310094.153Cavia_aperea
ENSMGAG00000013995CPSF310094.153ENSCPOG00000011299CPSF39894.153Cavia_porcellus
ENSMGAG00000013995CPSF310095.052ENSCCAG00000036730CPSF39995.052Cebus_capucinus
ENSMGAG00000013995CPSF310092.665ENSCATG00000014770CPSF39798.227Cercocebus_atys
ENSMGAG00000013995CPSF310093.853ENSCLAG00000002727CPSF39893.853Chinchilla_lanigera
ENSMGAG00000013995CPSF310087.106ENSCSAG00000007125CPSF39787.106Chlorocebus_sabaeus
ENSMGAG00000013995CPSF389100.000ENSCHOG00000000180CPSF38568.596Choloepus_hoffmanni
ENSMGAG00000013995CPSF39996.547ENSCPBG00000014074CPSF39696.547Chrysemys_picta_bellii
ENSMGAG00000013995CPSF39967.761ENSCING00000007214-9667.761Ciona_intestinalis
ENSMGAG00000013995CPSF310083.508ENSCANG00000034435CPSF39783.508Colobus_angolensis_palliatus
ENSMGAG00000013995CPSF310094.453ENSCGRG00001013134Cpsf39894.453Cricetulus_griseus_chok1gshd
ENSMGAG00000013995CPSF310094.453ENSCGRG00000018319Cpsf39894.453Cricetulus_griseus_crigri
ENSMGAG00000013995CPSF39985.907ENSCSEG00000002021CPSF39985.471Cynoglossus_semilaevis
ENSMGAG00000013995CPSF39987.387ENSCVAG00000015067CPSF39687.387Cyprinodon_variegatus
ENSMGAG00000013995CPSF39988.138ENSDARG00000027649cpsf39688.138Danio_rerio
ENSMGAG00000013995CPSF310093.563ENSDNOG00000008940CPSF39393.563Dasypus_novemcinctus
ENSMGAG00000013995CPSF39595.268ENSDORG00000014263Cpsf39795.268Dipodomys_ordii
ENSMGAG00000013995CPSF39967.218FBgn0261065Cpsf739667.218Drosophila_melanogaster
ENSMGAG00000013995CPSF39284.992ENSETEG00000003893CPSF39484.992Echinops_telfairi
ENSMGAG00000013995CPSF39978.686ENSEBUG00000009018cpsf39678.832Eptatretus_burgeri
ENSMGAG00000013995CPSF310095.052ENSEASG00005003970CPSF39895.052Equus_asinus_asinus
ENSMGAG00000013995CPSF310095.052ENSECAG00000019911CPSF39895.052Equus_caballus
ENSMGAG00000013995CPSF310079.160ENSEEUG00000015422CPSF39879.160Erinaceus_europaeus
ENSMGAG00000013995CPSF39987.519ENSELUG00000013775cpsf39984.567Esox_lucius
ENSMGAG00000013995CPSF310095.202ENSFCAG00000007852CPSF310095.054Felis_catus
ENSMGAG00000013995CPSF39797.372ENSFALG00000006572CPSF310097.372Ficedula_albicollis
ENSMGAG00000013995CPSF39993.835ENSFDAG00000006317CPSF39793.835Fukomys_damarensis
ENSMGAG00000013995CPSF310084.108ENSFHEG00000014774cpsf39784.108Fundulus_heteroclitus
ENSMGAG00000013995CPSF36167.726ENSFHEG00000012186CPSF39967.726Fundulus_heteroclitus
ENSMGAG00000013995CPSF310086.057ENSGMOG00000003157cpsf39786.057Gadus_morhua
ENSMGAG00000013995CPSF310099.850ENSGALG00000016424CPSF39999.843Gallus_gallus
ENSMGAG00000013995CPSF39987.970ENSGAFG00000008016CPSF39687.970Gambusia_affinis
ENSMGAG00000013995CPSF39482.381ENSGAFG00000019449cpsf39982.381Gambusia_affinis
ENSMGAG00000013995CPSF37094.647ENSGAGG00000025583CPSF39394.647Gopherus_agassizii
ENSMGAG00000013995CPSF310092.815ENSGGOG00000001757CPSF310094.961Gorilla_gorilla
ENSMGAG00000013995CPSF36179.506ENSHBUG00000014332CPSF39979.506Haplochromis_burtoni
ENSMGAG00000013995CPSF310085.457ENSHBUG00000001188cpsf39785.457Haplochromis_burtoni
ENSMGAG00000013995CPSF310093.553ENSHGLG00000000666CPSF39793.553Heterocephalus_glaber_female
ENSMGAG00000013995CPSF310093.553ENSHGLG00100007765CPSF39793.553Heterocephalus_glaber_male
ENSMGAG00000013995CPSF39985.736ENSHCOG00000015957CPSF39585.736Hippocampus_comes
ENSMGAG00000013995CPSF39985.285ENSHCOG00000007251cpsf39685.285Hippocampus_comes
ENSMGAG00000013995CPSF39986.486ENSIPUG00000023488cpsf39686.486Ictalurus_punctatus
ENSMGAG00000013995CPSF310094.603ENSSTOG00000004476CPSF39894.603Ictidomys_tridecemlineatus
ENSMGAG00000013995CPSF310094.303ENSJJAG00000023415Cpsf39894.303Jaculus_jaculus
ENSMGAG00000013995CPSF39987.538ENSKMAG00000007317CPSF39687.538Kryptolebias_marmoratus
ENSMGAG00000013995CPSF310084.258ENSKMAG00000002806cpsf39784.258Kryptolebias_marmoratus
ENSMGAG00000013995CPSF39588.013ENSLBEG00000013492CPSF39688.013Labrus_bergylta
ENSMGAG00000013995CPSF35678.667ENSLBEG00000015018-9978.667Labrus_bergylta
ENSMGAG00000013995CPSF39979.549ENSLBEG00000020569cpsf39279.549Labrus_bergylta
ENSMGAG00000013995CPSF39983.308ENSLACG00000008308CPSF39683.308Latimeria_chalumnae
ENSMGAG00000013995CPSF39989.055ENSLOCG00000016823cpsf39689.055Lepisosteus_oculatus
ENSMGAG00000013995CPSF310094.603ENSLAFG00000009467CPSF39894.603Loxodonta_africana
ENSMGAG00000013995CPSF310095.052ENSMFAG00000001339CPSF39994.892Macaca_fascicularis
ENSMGAG00000013995CPSF39794.900ENSMMUG00000018038CPSF310094.900Macaca_mulatta
ENSMGAG00000013995CPSF310082.009ENSMNEG00000039447CPSF39782.009Macaca_nemestrina
ENSMGAG00000013995CPSF310095.202ENSMLEG00000026825CPSF39895.202Mandrillus_leucophaeus
ENSMGAG00000013995CPSF39484.177ENSMAMG00000008835CPSF39984.177Mastacembelus_armatus
ENSMGAG00000013995CPSF310085.307ENSMAMG00000003076cpsf39785.307Mastacembelus_armatus
ENSMGAG00000013995CPSF310085.457ENSMZEG00005014358cpsf39785.457Maylandia_zebra
ENSMGAG00000013995CPSF39987.688ENSMZEG00005006258CPSF39985.714Maylandia_zebra
ENSMGAG00000013995CPSF35689.096ENSMAUG00000000166Cpsf310089.096Mesocricetus_auratus
ENSMGAG00000013995CPSF310089.955ENSMICG00000002363CPSF310089.375Microcebus_murinus
ENSMGAG00000013995CPSF310090.555ENSMOCG00000020067Cpsf39790.555Microtus_ochrogaster
ENSMGAG00000013995CPSF37577.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSMGAG00000013995CPSF39781.705ENSMMOG00000018212CPSF39881.705Mola_mola
ENSMGAG00000013995CPSF310093.620ENSMODG00000014703CPSF39893.620Monodelphis_domestica
ENSMGAG00000013995CPSF39582.969ENSMALG00000011474CPSF39982.969Monopterus_albus
ENSMGAG00000013995CPSF310085.757ENSMALG00000016416cpsf39785.757Monopterus_albus
ENSMGAG00000013995CPSF310094.303MGP_CAROLIEiJ_G0017640Cpsf39894.303Mus_caroli
ENSMGAG00000013995CPSF310094.303ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSMGAG00000013995CPSF310094.153MGP_PahariEiJ_G0029397Cpsf39894.153Mus_pahari
ENSMGAG00000013995CPSF310094.303MGP_SPRETEiJ_G0018481Cpsf39894.303Mus_spretus
ENSMGAG00000013995CPSF310094.753ENSMPUG00000013213CPSF39894.753Mustela_putorius_furo
ENSMGAG00000013995CPSF310094.461ENSMLUG00000010636CPSF39894.461Myotis_lucifugus
ENSMGAG00000013995CPSF310094.153ENSNGAG00000019836Cpsf39894.153Nannospalax_galili
ENSMGAG00000013995CPSF310085.307ENSNBRG00000004770cpsf39785.307Neolamprologus_brichardi
ENSMGAG00000013995CPSF39485.714ENSNBRG00000010525CPSF39985.714Neolamprologus_brichardi
ENSMGAG00000013995CPSF310095.052ENSNLEG00000013359CPSF310094.900Nomascus_leucogenys
ENSMGAG00000013995CPSF39764.241ENSMEUG00000013117-9464.241Notamacropus_eugenii
ENSMGAG00000013995CPSF310085.607ENSOPRG00000008902CPSF39885.607Ochotona_princeps
ENSMGAG00000013995CPSF310093.403ENSODEG00000003129CPSF39893.403Octodon_degus
ENSMGAG00000013995CPSF310085.607ENSONIG00000018812cpsf39785.607Oreochromis_niloticus
ENSMGAG00000013995CPSF38593.794ENSOANG00000008577CPSF310093.794Ornithorhynchus_anatinus
ENSMGAG00000013995CPSF310094.903ENSOCUG00000003728CPSF39894.903Oryctolagus_cuniculus
ENSMGAG00000013995CPSF310083.508ENSORLG00000018854cpsf39783.508Oryzias_latipes
ENSMGAG00000013995CPSF310083.508ENSORLG00020013331cpsf39783.508Oryzias_latipes_hni
ENSMGAG00000013995CPSF310083.508ENSORLG00015011017cpsf39783.508Oryzias_latipes_hsok
ENSMGAG00000013995CPSF310083.658ENSOMEG00000010647cpsf39283.658Oryzias_melastigma
ENSMGAG00000013995CPSF310084.708ENSOGAG00000001680CPSF39884.708Otolemur_garnettii
ENSMGAG00000013995CPSF310095.202ENSOARG00000015073CPSF39895.202Ovis_aries
ENSMGAG00000013995CPSF310095.202ENSPPAG00000042457CPSF39895.202Pan_paniscus
ENSMGAG00000013995CPSF310094.903ENSPPRG00000016790CPSF310094.745Panthera_pardus
ENSMGAG00000013995CPSF310094.903ENSPTIG00000003920CPSF310094.646Panthera_tigris_altaica
ENSMGAG00000013995CPSF310095.202ENSPTRG00000011638CPSF39895.202Pan_troglodytes
ENSMGAG00000013995CPSF310094.903ENSPANG00000016798CPSF39894.903Papio_anubis
ENSMGAG00000013995CPSF39989.173ENSPKIG00000023646cpsf39988.837Paramormyrops_kingsleyae
ENSMGAG00000013995CPSF310095.652ENSPSIG00000016144CPSF39895.652Pelodiscus_sinensis
ENSMGAG00000013995CPSF36178.272ENSPMGG00000015311CPSF39978.272Periophthalmus_magnuspinnatus
ENSMGAG00000013995CPSF38585.211ENSPMGG00000006141-9885.211Periophthalmus_magnuspinnatus
ENSMGAG00000013995CPSF310094.153ENSPEMG00000017668Cpsf39894.153Peromyscus_maniculatus_bairdii
ENSMGAG00000013995CPSF37890.787ENSPMAG00000004841cpsf39690.787Petromyzon_marinus
ENSMGAG00000013995CPSF310095.202ENSPCIG00000009823CPSF39895.706Phascolarctos_cinereus
ENSMGAG00000013995CPSF39987.519ENSPFOG00000010418-9687.519Poecilia_formosa
ENSMGAG00000013995CPSF310084.408ENSPFOG00000015922cpsf39684.408Poecilia_formosa
ENSMGAG00000013995CPSF36180.693ENSPLAG00000021300-9980.693Poecilia_latipinna
ENSMGAG00000013995CPSF310084.408ENSPLAG00000000882cpsf39684.408Poecilia_latipinna
ENSMGAG00000013995CPSF310084.558ENSPMEG00000018309cpsf39684.558Poecilia_mexicana
ENSMGAG00000013995CPSF39982.556ENSPREG00000004482CPSF39682.556Poecilia_reticulata
ENSMGAG00000013995CPSF39482.222ENSPREG00000014875cpsf39982.222Poecilia_reticulata
ENSMGAG00000013995CPSF310090.555ENSPPYG00000012666CPSF39790.555Pongo_abelii
ENSMGAG00000013995CPSF39262.643ENSPCAG00000015042CPSF39462.643Procavia_capensis
ENSMGAG00000013995CPSF39087.500ENSPCOG00000023016CPSF39787.500Propithecus_coquereli
ENSMGAG00000013995CPSF39994.887ENSPVAG00000005324CPSF39794.887Pteropus_vampyrus
ENSMGAG00000013995CPSF38190.608ENSPNYG00000021047CPSF39190.608Pundamilia_nyererei
ENSMGAG00000013995CPSF310085.457ENSPNYG00000004405cpsf39785.457Pundamilia_nyererei
ENSMGAG00000013995CPSF39986.937ENSPNAG00000023060cpsf39984.738Pygocentrus_nattereri
ENSMGAG00000013995CPSF39994.436ENSRNOG00000052418Cpsf39794.436Rattus_norvegicus
ENSMGAG00000013995CPSF310089.205ENSRBIG00000041615CPSF39990.572Rhinopithecus_bieti
ENSMGAG00000013995CPSF310095.202ENSRROG00000033792CPSF39895.202Rhinopithecus_roxellana
ENSMGAG00000013995CPSF39441.040YLR277CYSH19341.040Saccharomyces_cerevisiae
ENSMGAG00000013995CPSF310091.154ENSSBOG00000027263CPSF39791.154Saimiri_boliviensis_boliviensis
ENSMGAG00000013995CPSF310095.352ENSSHAG00000007024CPSF39895.352Sarcophilus_harrisii
ENSMGAG00000013995CPSF39989.023ENSSFOG00015002108cpsf39988.468Scleropages_formosus
ENSMGAG00000013995CPSF39586.929ENSSMAG00000020534CPSF39386.929Scophthalmus_maximus
ENSMGAG00000013995CPSF310085.757ENSSDUG00000002828cpsf39485.757Seriola_dumerili
ENSMGAG00000013995CPSF39987.237ENSSDUG00000018498CPSF39985.079Seriola_dumerili
ENSMGAG00000013995CPSF39987.237ENSSLDG00000005234CPSF39984.921Seriola_lalandi_dorsalis
ENSMGAG00000013995CPSF310085.907ENSSLDG00000008469cpsf39485.907Seriola_lalandi_dorsalis
ENSMGAG00000013995CPSF310077.961ENSSARG00000005186CPSF39877.961Sorex_araneus
ENSMGAG00000013995CPSF310092.399ENSSPUG00000015525CPSF39792.399Sphenodon_punctatus
ENSMGAG00000013995CPSF39986.937ENSSPAG00000002906CPSF39984.603Stegastes_partitus
ENSMGAG00000013995CPSF310085.607ENSSPAG00000018579cpsf39785.607Stegastes_partitus
ENSMGAG00000013995CPSF39995.195ENSSSCG00000020799CPSF39993.610Sus_scrofa
ENSMGAG00000013995CPSF310097.301ENSTGUG00000013016CPSF39897.301Taeniopygia_guttata
ENSMGAG00000013995CPSF39985.263ENSTRUG00000007030cpsf39585.263Takifugu_rubripes
ENSMGAG00000013995CPSF36172.482ENSTRUG00000013905CPSF39972.482Takifugu_rubripes
ENSMGAG00000013995CPSF38593.391ENSTBEG00000002707CPSF38293.391Tupaia_belangeri
ENSMGAG00000013995CPSF38783.871ENSTTRG00000000861CPSF38583.871Tursiops_truncatus
ENSMGAG00000013995CPSF39695.462ENSUAMG00000007535CPSF39295.462Ursus_americanus
ENSMGAG00000013995CPSF39794.900ENSUMAG00000003676CPSF310094.900Ursus_maritimus
ENSMGAG00000013995CPSF39593.533ENSVPAG00000008041CPSF310093.533Vicugna_pacos
ENSMGAG00000013995CPSF310095.052ENSVVUG00000002194CPSF39895.052Vulpes_vulpes
ENSMGAG00000013995CPSF39990.376ENSXETG00000008263cpsf39690.376Xenopus_tropicalis
ENSMGAG00000013995CPSF310084.708ENSXCOG00000019695cpsf39684.708Xiphophorus_couchianus
ENSMGAG00000013995CPSF35679.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSMGAG00000013995CPSF310084.558ENSXMAG00000009784cpsf310084.080Xiphophorus_maculatus
ENSMGAG00000013995CPSF39987.820ENSXMAG00000027291CPSF39687.820Xiphophorus_maculatus

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