EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000014360 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 245205 bases
Position: chr1:88607842-88853046
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000015193	CMS1	PF14617.6	3.3e-31	1	1
ENSMGAP00000015193	DEAD	PF00270.29	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000016142	CMSS1-201	1021	-	ENSMGAP00000015193	228 (aa)	-	G1NNG9

Gene Model

Click here to download ENSMGAG00000014360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000014360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000014360	CMSS1	100	67.544	ENSG00000184220	CMSS1	99	72.840	Homo_sapiens
ENSMGAG00000014360	CMSS1	89	64.356	ENSAPOG00000010604	cmss1	82	64.356	Acanthochromis_polyacanthus
ENSMGAG00000014360	CMSS1	100	67.249	ENSAMEG00000004092	CMSS1	88	67.249	Ailuropoda_melanoleuca
ENSMGAG00000014360	CMSS1	89	55.446	ENSACIG00000021854	cmss1	75	55.446	Amphilophus_citrinellus
ENSMGAG00000014360	CMSS1	89	63.366	ENSAOCG00000013361	cmss1	70	63.366	Amphiprion_ocellaris
ENSMGAG00000014360	CMSS1	89	63.366	ENSAPEG00000005829	cmss1	70	63.366	Amphiprion_percula
ENSMGAG00000014360	CMSS1	90	64.563	ENSATEG00000008209	cmss1	74	64.356	Anabas_testudineus
ENSMGAG00000014360	CMSS1	100	92.576	ENSAPLG00000010542	CMSS1	99	92.576	Anas_platyrhynchos
ENSMGAG00000014360	CMSS1	89	79.703	ENSACAG00000011065	CMSS1	74	79.703	Anolis_carolinensis
ENSMGAG00000014360	CMSS1	100	67.982	ENSANAG00000023565	CMSS1	87	67.982	Aotus_nancymaae
ENSMGAG00000014360	CMSS1	89	64.356	ENSACLG00000027294	cmss1	69	64.356	Astatotilapia_calliptera
ENSMGAG00000014360	CMSS1	99	58.696	ENSAMXG00000002046	cmss1	78	58.696	Astyanax_mexicanus
ENSMGAG00000014360	CMSS1	100	67.544	ENSBTAG00000013663	CMSS1	83	67.544	Bos_taurus
ENSMGAG00000014360	CMSS1	100	69.298	ENSCJAG00000000610	CMSS1	87	69.298	Callithrix_jacchus
ENSMGAG00000014360	CMSS1	100	67.982	ENSCAFG00000009230	CMSS1	83	67.982	Canis_familiaris
ENSMGAG00000014360	CMSS1	89	67.822	ENSCAFG00020024156	-	62	67.822	Canis_lupus_dingo
ENSMGAG00000014360	CMSS1	100	67.982	ENSCAFG00020009464	-	83	67.982	Canis_lupus_dingo
ENSMGAG00000014360	CMSS1	100	67.982	ENSCHIG00000013003	CMSS1	83	67.982	Capra_hircus
ENSMGAG00000014360	CMSS1	100	67.105	ENSTSYG00000009266	CMSS1	88	67.105	Carlito_syrichta
ENSMGAG00000014360	CMSS1	82	62.903	ENSCAPG00000013584	CMSS1	87	62.903	Cavia_aperea
ENSMGAG00000014360	CMSS1	100	68.860	ENSCPOG00000014680	CMSS1	82	68.860	Cavia_porcellus
ENSMGAG00000014360	CMSS1	100	68.860	ENSCCAG00000034685	CMSS1	87	68.860	Cebus_capucinus
ENSMGAG00000014360	CMSS1	100	67.982	ENSCATG00000031980	CMSS1	87	67.982	Cercocebus_atys
ENSMGAG00000014360	CMSS1	100	68.421	ENSCLAG00000011241	CMSS1	98	68.421	Chinchilla_lanigera
ENSMGAG00000014360	CMSS1	100	67.982	ENSCSAG00000006024	CMSS1	93	67.982	Chlorocebus_sabaeus
ENSMGAG00000014360	CMSS1	100	49.123	ENSCHOG00000012098	CMSS1	83	49.123	Choloepus_hoffmanni
ENSMGAG00000014360	CMSS1	86	40.909	ENSCING00000014848	-	99	41.711	Ciona_intestinalis
ENSMGAG00000014360	CMSS1	55	40.476	ENSCSAVG00000002309	-	99	40.476	Ciona_savignyi
ENSMGAG00000014360	CMSS1	100	67.544	ENSCANG00000031337	CMSS1	87	67.544	Colobus_angolensis_palliatus
ENSMGAG00000014360	CMSS1	100	67.982	ENSCGRG00001014305	Cmss1	82	67.982	Cricetulus_griseus_chok1gshd
ENSMGAG00000014360	CMSS1	100	67.982	ENSCGRG00000006722	Cmss1	89	67.982	Cricetulus_griseus_crigri
ENSMGAG00000014360	CMSS1	89	67.822	ENSCSEG00000004958	cmss1	69	67.822	Cynoglossus_semilaevis
ENSMGAG00000014360	CMSS1	89	63.366	ENSCVAG00000005039	cmss1	70	63.366	Cyprinodon_variegatus
ENSMGAG00000014360	CMSS1	89	58.416	ENSDARG00000112579	cmss1	69	58.416	Danio_rerio
ENSMGAG00000014360	CMSS1	100	67.105	ENSDNOG00000040418	CMSS1	83	67.105	Dasypus_novemcinctus
ENSMGAG00000014360	CMSS1	100	68.421	ENSDORG00000010461	Cmss1	82	68.421	Dipodomys_ordii
ENSMGAG00000014360	CMSS1	58	46.970	ENSEBUG00000002156	-	96	46.970	Eptatretus_burgeri
ENSMGAG00000014360	CMSS1	100	68.421	ENSEASG00005010966	CMSS1	92	70.297	Equus_asinus_asinus
ENSMGAG00000014360	CMSS1	100	67.982	ENSECAG00000015662	CMSS1	99	67.699	Equus_caballus
ENSMGAG00000014360	CMSS1	100	48.684	ENSEEUG00000007624	-	82	48.684	Erinaceus_europaeus
ENSMGAG00000014360	CMSS1	89	61.881	ENSELUG00000019459	cmss1	67	61.881	Esox_lucius
ENSMGAG00000014360	CMSS1	100	68.860	ENSFCAG00000044577	CMSS1	82	68.860	Felis_catus
ENSMGAG00000014360	CMSS1	100	87.719	ENSFALG00000005816	CMSS1	96	87.719	Ficedula_albicollis
ENSMGAG00000014360	CMSS1	100	66.667	ENSFDAG00000012577	CMSS1	100	66.667	Fukomys_damarensis
ENSMGAG00000014360	CMSS1	89	61.881	ENSFHEG00000012008	cmss1	83	61.881	Fundulus_heteroclitus
ENSMGAG00000014360	CMSS1	89	61.881	ENSGMOG00000016729	cmss1	72	61.881	Gadus_morhua
ENSMGAG00000014360	CMSS1	100	98.246	ENSGALG00000015267	CMSS1	87	98.246	Gallus_gallus
ENSMGAG00000014360	CMSS1	91	62.802	ENSGAFG00000021217	cmss1	77	62.376	Gambusia_affinis
ENSMGAG00000014360	CMSS1	89	62.871	ENSGACG00000002798	cmss1	72	62.871	Gasterosteus_aculeatus
ENSMGAG00000014360	CMSS1	100	80.263	ENSGAGG00000019861	CMSS1	89	80.263	Gopherus_agassizii
ENSMGAG00000014360	CMSS1	100	68.421	ENSGGOG00000014125	CMSS1	87	68.421	Gorilla_gorilla
ENSMGAG00000014360	CMSS1	89	64.356	ENSHBUG00000008431	cmss1	71	64.356	Haplochromis_burtoni
ENSMGAG00000014360	CMSS1	99	69.027	ENSHGLG00000019481	CMSS1	92	69.027	Heterocephalus_glaber_female
ENSMGAG00000014360	CMSS1	99	69.027	ENSHGLG00100010314	CMSS1	91	69.027	Heterocephalus_glaber_male
ENSMGAG00000014360	CMSS1	89	63.861	ENSHCOG00000003222	cmss1	68	63.861	Hippocampus_comes
ENSMGAG00000014360	CMSS1	89	61.386	ENSIPUG00000011591	cmss1	70	61.386	Ictalurus_punctatus
ENSMGAG00000014360	CMSS1	100	67.105	ENSSTOG00000019366	CMSS1	82	67.105	Ictidomys_tridecemlineatus
ENSMGAG00000014360	CMSS1	100	68.860	ENSJJAG00000014894	Cmss1	90	69.802	Jaculus_jaculus
ENSMGAG00000014360	CMSS1	89	58.416	ENSKMAG00000002390	cmss1	81	57.426	Kryptolebias_marmoratus
ENSMGAG00000014360	CMSS1	89	62.069	ENSLBEG00000006298	cmss1	83	62.069	Labrus_bergylta
ENSMGAG00000014360	CMSS1	100	66.957	ENSLACG00000009293	CMSS1	100	66.957	Latimeria_chalumnae
ENSMGAG00000014360	CMSS1	99	59.649	ENSLOCG00000009391	cmss1	81	59.211	Lepisosteus_oculatus
ENSMGAG00000014360	CMSS1	100	66.667	ENSLAFG00000017509	CMSS1	100	66.667	Loxodonta_africana
ENSMGAG00000014360	CMSS1	100	68.421	ENSMFAG00000045006	CMSS1	87	68.421	Macaca_fascicularis
ENSMGAG00000014360	CMSS1	100	67.982	ENSMMUG00000002939	CMSS1	97	68.349	Macaca_mulatta
ENSMGAG00000014360	CMSS1	100	68.421	ENSMNEG00000031315	CMSS1	87	68.421	Macaca_nemestrina
ENSMGAG00000014360	CMSS1	100	68.421	ENSMLEG00000033660	CMSS1	87	68.421	Mandrillus_leucophaeus
ENSMGAG00000014360	CMSS1	89	64.356	ENSMAMG00000017176	cmss1	70	64.356	Mastacembelus_armatus
ENSMGAG00000014360	CMSS1	89	64.356	ENSMZEG00005021886	cmss1	69	64.356	Maylandia_zebra
ENSMGAG00000014360	CMSS1	100	46.930	ENSMAUG00000020609	Cmss1	78	46.930	Mesocricetus_auratus
ENSMGAG00000014360	CMSS1	100	67.544	ENSMICG00000048977	CMSS1	88	67.544	Microcebus_murinus
ENSMGAG00000014360	CMSS1	100	68.421	ENSMOCG00000021937	Cmss1	83	68.421	Microtus_ochrogaster
ENSMGAG00000014360	CMSS1	89	62.376	ENSMMOG00000019794	cmss1	84	62.376	Mola_mola
ENSMGAG00000014360	CMSS1	100	71.930	ENSMODG00000002275	CMSS1	86	71.930	Monodelphis_domestica
ENSMGAG00000014360	CMSS1	89	66.337	ENSMALG00000004250	cmss1	69	66.337	Monopterus_albus
ENSMGAG00000014360	CMSS1	100	67.686	MGP_CAROLIEiJ_G0020824	Cmss1	83	67.686	Mus_caroli
ENSMGAG00000014360	CMSS1	100	67.686	ENSMUSG00000022748	Cmss1	83	67.686	Mus_musculus
ENSMGAG00000014360	CMSS1	100	67.686	MGP_PahariEiJ_G0016524	Cmss1	83	67.686	Mus_pahari
ENSMGAG00000014360	CMSS1	100	67.686	MGP_SPRETEiJ_G0021724	Cmss1	83	67.686	Mus_spretus
ENSMGAG00000014360	CMSS1	99	68.722	ENSMPUG00000011324	CMSS1	88	68.722	Mustela_putorius_furo
ENSMGAG00000014360	CMSS1	100	68.696	ENSMLUG00000001131	CMSS1	87	68.696	Myotis_lucifugus
ENSMGAG00000014360	CMSS1	100	67.982	ENSNGAG00000020316	Cmss1	82	67.982	Nannospalax_galili
ENSMGAG00000014360	CMSS1	89	64.356	ENSNBRG00000003095	cmss1	69	64.356	Neolamprologus_brichardi
ENSMGAG00000014360	CMSS1	100	68.421	ENSNLEG00000034172	CMSS1	87	68.421	Nomascus_leucogenys
ENSMGAG00000014360	CMSS1	100	62.719	ENSMEUG00000014505	CMSS1	100	62.719	Notamacropus_eugenii
ENSMGAG00000014360	CMSS1	100	69.298	ENSOPRG00000002986	CMSS1	82	69.298	Ochotona_princeps
ENSMGAG00000014360	CMSS1	100	57.895	ENSODEG00000001853	-	81	57.895	Octodon_degus
ENSMGAG00000014360	CMSS1	100	66.228	ENSODEG00000003558	-	84	66.228	Octodon_degus
ENSMGAG00000014360	CMSS1	89	58.416	ENSODEG00000009446	-	78	58.416	Octodon_degus
ENSMGAG00000014360	CMSS1	100	67.982	ENSODEG00000005226	-	82	67.982	Octodon_degus
ENSMGAG00000014360	CMSS1	89	63.366	ENSONIG00000006678	cmss1	77	63.366	Oreochromis_niloticus
ENSMGAG00000014360	CMSS1	100	76.316	ENSOANG00000007529	CMSS1	99	75.000	Ornithorhynchus_anatinus
ENSMGAG00000014360	CMSS1	100	68.421	ENSOCUG00000025366	CMSS1	83	68.421	Oryctolagus_cuniculus
ENSMGAG00000014360	CMSS1	89	63.861	ENSORLG00000020340	cmss1	71	63.861	Oryzias_latipes
ENSMGAG00000014360	CMSS1	93	57.820	ENSORLG00020012235	cmss1	85	56.931	Oryzias_latipes_hni
ENSMGAG00000014360	CMSS1	89	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSMGAG00000014360	CMSS1	89	63.366	ENSOMEG00000012555	cmss1	70	63.366	Oryzias_melastigma
ENSMGAG00000014360	CMSS1	100	66.667	ENSOGAG00000002045	CMSS1	100	66.667	Otolemur_garnettii
ENSMGAG00000014360	CMSS1	100	68.122	ENSOARG00000017899	CMSS1	79	68.122	Ovis_aries
ENSMGAG00000014360	CMSS1	100	68.421	ENSPPAG00000038515	CMSS1	84	68.421	Pan_paniscus
ENSMGAG00000014360	CMSS1	100	68.860	ENSPPRG00000016767	CMSS1	82	68.860	Panthera_pardus
ENSMGAG00000014360	CMSS1	100	68.421	ENSPTIG00000018274	CMSS1	82	68.421	Panthera_tigris_altaica
ENSMGAG00000014360	CMSS1	100	67.982	ENSPTRG00000015157	CMSS1	93	67.982	Pan_troglodytes
ENSMGAG00000014360	CMSS1	100	67.982	ENSPANG00000019980	CMSS1	91	67.982	Papio_anubis
ENSMGAG00000014360	CMSS1	99	64.783	ENSPKIG00000012609	cmss1	85	64.783	Paramormyrops_kingsleyae
ENSMGAG00000014360	CMSS1	100	83.772	ENSPSIG00000003849	CMSS1	99	83.772	Pelodiscus_sinensis
ENSMGAG00000014360	CMSS1	89	64.039	ENSPMGG00000010286	cmss1	87	64.039	Periophthalmus_magnuspinnatus
ENSMGAG00000014360	CMSS1	100	67.982	ENSPEMG00000016384	Cmss1	81	67.982	Peromyscus_maniculatus_bairdii
ENSMGAG00000014360	CMSS1	89	53.431	ENSPMAG00000001146	cmss1	99	53.960	Petromyzon_marinus
ENSMGAG00000014360	CMSS1	100	73.246	ENSPCIG00000015656	CMSS1	86	73.246	Phascolarctos_cinereus
ENSMGAG00000014360	CMSS1	89	61.386	ENSPFOG00000016849	cmss1	71	61.386	Poecilia_formosa
ENSMGAG00000014360	CMSS1	89	60.891	ENSPLAG00000008323	cmss1	71	60.891	Poecilia_latipinna
ENSMGAG00000014360	CMSS1	89	61.386	ENSPMEG00000021020	cmss1	70	61.386	Poecilia_mexicana
ENSMGAG00000014360	CMSS1	89	60.396	ENSPREG00000007618	cmss1	69	60.396	Poecilia_reticulata
ENSMGAG00000014360	CMSS1	100	69.298	ENSPPYG00000013606	CMSS1	84	69.298	Pongo_abelii
ENSMGAG00000014360	CMSS1	100	67.982	ENSPCOG00000020035	CMSS1	88	67.982	Propithecus_coquereli
ENSMGAG00000014360	CMSS1	100	57.895	ENSPVAG00000017031	CMSS1	82	57.895	Pteropus_vampyrus
ENSMGAG00000014360	CMSS1	77	67.045	ENSPNYG00000013428	cmss1	65	67.045	Pundamilia_nyererei
ENSMGAG00000014360	CMSS1	89	60.891	ENSPNAG00000007912	cmss1	69	60.891	Pygocentrus_nattereri
ENSMGAG00000014360	CMSS1	100	67.249	ENSRNOG00000027888	Cmss1	89	67.249	Rattus_norvegicus
ENSMGAG00000014360	CMSS1	100	67.544	ENSRBIG00000037931	CMSS1	87	67.544	Rhinopithecus_bieti
ENSMGAG00000014360	CMSS1	100	67.544	ENSRROG00000042910	CMSS1	87	67.544	Rhinopithecus_roxellana
ENSMGAG00000014360	CMSS1	100	67.544	ENSSBOG00000030980	CMSS1	87	67.544	Saimiri_boliviensis_boliviensis
ENSMGAG00000014360	CMSS1	100	73.246	ENSSHAG00000009321	CMSS1	90	73.246	Sarcophilus_harrisii
ENSMGAG00000014360	CMSS1	99	63.478	ENSSFOG00015001509	cmss1	79	63.478	Scleropages_formosus
ENSMGAG00000014360	CMSS1	89	66.337	ENSSMAG00000001653	cmss1	69	66.337	Scophthalmus_maximus
ENSMGAG00000014360	CMSS1	89	65.347	ENSSDUG00000007719	cmss1	80	61.739	Seriola_dumerili
ENSMGAG00000014360	CMSS1	99	60.606	ENSSLDG00000012300	cmss1	78	60.606	Seriola_lalandi_dorsalis
ENSMGAG00000014360	CMSS1	100	57.018	ENSSARG00000003584	CMSS1	81	57.018	Sorex_araneus
ENSMGAG00000014360	CMSS1	99	80.973	ENSSPUG00000003865	CMSS1	100	80.973	Sphenodon_punctatus
ENSMGAG00000014360	CMSS1	90	66.505	ENSSPAG00000019182	cmss1	63	66.337	Stegastes_partitus
ENSMGAG00000014360	CMSS1	100	67.544	ENSSSCG00000011970	CMSS1	82	67.544	Sus_scrofa
ENSMGAG00000014360	CMSS1	100	88.158	ENSTGUG00000013635	CMSS1	99	88.158	Taeniopygia_guttata
ENSMGAG00000014360	CMSS1	89	63.366	ENSTRUG00000015265	cmss1	72	63.366	Takifugu_rubripes
ENSMGAG00000014360	CMSS1	89	58.416	ENSTNIG00000002880	cmss1	73	58.416	Tetraodon_nigroviridis
ENSMGAG00000014360	CMSS1	100	47.807	ENSTBEG00000016722	CMSS1	81	47.807	Tupaia_belangeri
ENSMGAG00000014360	CMSS1	100	65.789	ENSTTRG00000001562	CMSS1	81	65.789	Tursiops_truncatus
ENSMGAG00000014360	CMSS1	100	68.421	ENSUAMG00000024209	CMSS1	100	68.161	Ursus_americanus
ENSMGAG00000014360	CMSS1	100	67.982	ENSUMAG00000001983	CMSS1	88	67.982	Ursus_maritimus
ENSMGAG00000014360	CMSS1	100	54.386	ENSVPAG00000000263	CMSS1	57	71.250	Vicugna_pacos
ENSMGAG00000014360	CMSS1	89	69.802	ENSVVUG00000007776	-	80	69.802	Vulpes_vulpes
ENSMGAG00000014360	CMSS1	100	68.421	ENSVVUG00000021647	-	93	68.421	Vulpes_vulpes
ENSMGAG00000014360	CMSS1	89	67.327	ENSXETG00000011858	cmss1	72	67.327	Xenopus_tropicalis
ENSMGAG00000014360	CMSS1	91	62.019	ENSXCOG00000018724	cmss1	69	61.881	Xiphophorus_couchianus
ENSMGAG00000014360	CMSS1	91	62.019	ENSXMAG00000011243	cmss1	76	61.881	Xiphophorus_maculatus