EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000014515 (Gene tree)
Gene ID: 100539853
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 33787 bases
Position: chr1:112181776-112215562
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000015368	RRM_1	PF00076.22	3.7e-09	1	1
ENSMGAP00000019579	RRM_1	PF00076.22	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000018580	SCAF4-202	3613	-	ENSMGAP00000019579	1083 (aa)	-	G3UUW0
ENSMGAT00000016323	SCAF4-201	3658	-	ENSMGAP00000015368	1098 (aa)	-	G1NNV6

Gene Model

Click here to download ENSMGAG00000014515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000014515's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000014515	SCAF4	59	83.462	ENSG00000156304	SCAF4	99	76.281	Homo_sapiens
ENSMGAG00000014515	SCAF4	86	52.996	ENSAPOG00000002946	scaf4a	59	58.485	Acanthochromis_polyacanthus
ENSMGAG00000014515	SCAF4	67	59.470	ENSAPOG00000019615	scaf4b	61	65.581	Acanthochromis_polyacanthus
ENSMGAG00000014515	SCAF4	86	52.435	ENSAOCG00000000615	scaf4a	58	58.369	Amphiprion_ocellaris
ENSMGAG00000014515	SCAF4	86	52.435	ENSAPEG00000021229	scaf4a	58	58.226	Amphiprion_percula
ENSMGAG00000014515	SCAF4	100	95.383	ENSAPLG00000002509	SCAF4	99	94.645	Anas_platyrhynchos
ENSMGAG00000014515	SCAF4	95	77.831	ENSACAG00000002569	SCAF4	99	69.007	Anolis_carolinensis
ENSMGAG00000014515	SCAF4	59	83.617	ENSANAG00000037494	SCAF4	99	76.128	Aotus_nancymaae
ENSMGAG00000014515	SCAF4	93	52.722	ENSAMXG00000008585	scaf4a	64	59.486	Astyanax_mexicanus
ENSMGAG00000014515	SCAF4	63	82.370	ENSBTAG00000018855	SCAF4	99	76.311	Bos_taurus
ENSMGAG00000014515	SCAF4	59	83.901	ENSCJAG00000008993	SCAF4	99	80.579	Callithrix_jacchus
ENSMGAG00000014515	SCAF4	59	83.670	ENSCAFG00000008863	SCAF4	99	77.072	Canis_familiaris
ENSMGAG00000014515	SCAF4	58	80.595	ENSCAFG00020026019	SCAF4	100	74.554	Canis_lupus_dingo
ENSMGAG00000014515	SCAF4	59	82.827	ENSCHIG00000008385	SCAF4	99	76.174	Capra_hircus
ENSMGAG00000014515	SCAF4	59	81.804	ENSCPOG00000012443	SCAF4	99	75.000	Cavia_porcellus
ENSMGAG00000014515	SCAF4	62	41.429	ENSCPOG00000022216	-	50	43.294	Cavia_porcellus
ENSMGAG00000014515	SCAF4	59	83.746	ENSCCAG00000033727	SCAF4	99	76.414	Cebus_capucinus
ENSMGAG00000014515	SCAF4	58	84.628	ENSCATG00000030379	SCAF4	100	76.003	Cercocebus_atys
ENSMGAG00000014515	SCAF4	99	71.006	ENSCLAG00000006298	SCAF4	100	74.029	Chinchilla_lanigera
ENSMGAG00000014515	SCAF4	59	82.716	ENSCSAG00000009438	SCAF4	99	75.805	Chlorocebus_sabaeus
ENSMGAG00000014515	SCAF4	59	83.462	ENSCANG00000029847	SCAF4	99	76.261	Colobus_angolensis_palliatus
ENSMGAG00000014515	SCAF4	59	71.884	ENSCGRG00001020821	Scaf4	100	74.934	Cricetulus_griseus_chok1gshd
ENSMGAG00000014515	SCAF4	59	70.711	ENSCGRG00000014360	Scaf4	100	74.599	Cricetulus_griseus_crigri
ENSMGAG00000014515	SCAF4	86	49.144	ENSCSEG00000019549	scaf4a	57	52.489	Cynoglossus_semilaevis
ENSMGAG00000014515	SCAF4	89	50.959	ENSDARG00000077093	scaf4a	58	56.541	Danio_rerio
ENSMGAG00000014515	SCAF4	59	77.761	ENSDNOG00000019014	SCAF4	94	73.111	Dasypus_novemcinctus
ENSMGAG00000014515	SCAF4	95	63.686	ENSETEG00000000583	SCAF4	99	65.395	Echinops_telfairi
ENSMGAG00000014515	SCAF4	59	83.566	ENSEASG00005007756	SCAF4	99	76.997	Equus_asinus_asinus
ENSMGAG00000014515	SCAF4	59	83.566	ENSECAG00000014248	SCAF4	99	76.930	Equus_caballus
ENSMGAG00000014515	SCAF4	59	82.949	ENSFCAG00000002228	SCAF4	99	76.614	Felis_catus
ENSMGAG00000014515	SCAF4	62	78.431	ENSFDAG00000017780	SCAF4	100	73.883	Fukomys_damarensis
ENSMGAG00000014515	SCAF4	100	99.077	ENSGALG00000033965	SCAF4	99	99.077	Gallus_gallus
ENSMGAG00000014515	SCAF4	92	78.112	ENSGGOG00000015557	SCAF4	99	83.459	Gorilla_gorilla
ENSMGAG00000014515	SCAF4	59	81.364	ENSHGLG00000010582	SCAF4	99	75.326	Heterocephalus_glaber_female
ENSMGAG00000014515	SCAF4	58	81.679	ENSHGLG00100009441	SCAF4	100	75.348	Heterocephalus_glaber_male
ENSMGAG00000014515	SCAF4	52	48.333	ENSIPUG00000011285	scaf4	66	62.135	Ictalurus_punctatus
ENSMGAG00000014515	SCAF4	58	72.798	ENSSTOG00000004450	SCAF4	100	70.764	Ictidomys_tridecemlineatus
ENSMGAG00000014515	SCAF4	99	68.072	ENSJJAG00000019447	Scaf4	99	74.758	Jaculus_jaculus
ENSMGAG00000014515	SCAF4	64	57.854	ENSKMAG00000005742	scaf4b	56	73.563	Kryptolebias_marmoratus
ENSMGAG00000014515	SCAF4	83	51.667	ENSLBEG00000014675	scaf4a	58	57.353	Labrus_bergylta
ENSMGAG00000014515	SCAF4	97	63.024	ENSLACG00000013913	SCAF4	100	65.328	Latimeria_chalumnae
ENSMGAG00000014515	SCAF4	97	59.640	ENSLOCG00000009162	scaf4a	99	58.133	Lepisosteus_oculatus
ENSMGAG00000014515	SCAF4	59	91.235	ENSLAFG00000010710	SCAF4	99	78.097	Loxodonta_africana
ENSMGAG00000014515	SCAF4	58	84.628	ENSMFAG00000037668	SCAF4	99	75.726	Macaca_fascicularis
ENSMGAG00000014515	SCAF4	59	83.437	ENSMMUG00000001712	SCAF4	99	75.629	Macaca_mulatta
ENSMGAG00000014515	SCAF4	58	84.628	ENSMNEG00000032966	SCAF4	99	75.659	Macaca_nemestrina
ENSMGAG00000014515	SCAF4	59	83.437	ENSMLEG00000039674	SCAF4	100	76.021	Mandrillus_leucophaeus
ENSMGAG00000014515	SCAF4	62	81.042	ENSMAUG00000013307	Scaf4	100	74.758	Mesocricetus_auratus
ENSMGAG00000014515	SCAF4	59	84.013	ENSMICG00000005256	SCAF4	99	76.882	Microcebus_murinus
ENSMGAG00000014515	SCAF4	98	74.247	ENSMOCG00000012087	Scaf4	99	74.677	Microtus_ochrogaster
ENSMGAG00000014515	SCAF4	100	78.623	ENSMODG00000021040	SCAF4	99	78.986	Monodelphis_domestica
ENSMGAG00000014515	SCAF4	58	85.560	MGP_CAROLIEiJ_G0020944	Scaf4	99	74.742	Mus_caroli
ENSMGAG00000014515	SCAF4	59	75.472	ENSMUSG00000022983	Scaf4	99	75.000	Mus_musculus
ENSMGAG00000014515	SCAF4	57	87.121	MGP_PahariEiJ_G0016649	Scaf4	99	75.196	Mus_pahari
ENSMGAG00000014515	SCAF4	59	72.045	MGP_SPRETEiJ_G0021850	Scaf4	99	75.000	Mus_spretus
ENSMGAG00000014515	SCAF4	59	83.077	ENSMPUG00000001078	SCAF4	99	76.104	Mustela_putorius_furo
ENSMGAG00000014515	SCAF4	59	74.240	ENSMLUG00000011472	SCAF4	77	72.272	Myotis_lucifugus
ENSMGAG00000014515	SCAF4	58	82.226	ENSNGAG00000005214	Scaf4	99	75.721	Nannospalax_galili
ENSMGAG00000014515	SCAF4	59	83.153	ENSNLEG00000003569	SCAF4	99	76.368	Nomascus_leucogenys
ENSMGAG00000014515	SCAF4	84	73.780	ENSOPRG00000007016	SCAF4	79	76.179	Ochotona_princeps
ENSMGAG00000014515	SCAF4	86	54.564	ENSONIG00000004687	scaf4a	66	58.550	Oreochromis_niloticus
ENSMGAG00000014515	SCAF4	59	82.462	ENSOCUG00000008336	SCAF4	99	74.196	Oryctolagus_cuniculus
ENSMGAG00000014515	SCAF4	93	47.768	ENSORLG00020011857	scaf4a	56	56.294	Oryzias_latipes_hni
ENSMGAG00000014515	SCAF4	70	54.673	ENSOMEG00000014482	scaf4a	56	58.333	Oryzias_melastigma
ENSMGAG00000014515	SCAF4	58	86.513	ENSOGAG00000014653	SCAF4	94	73.500	Otolemur_garnettii
ENSMGAG00000014515	SCAF4	58	82.209	ENSOARG00000013894	SCAF4	98	76.240	Ovis_aries
ENSMGAG00000014515	SCAF4	59	83.462	ENSPPAG00000028535	SCAF4	99	76.281	Pan_paniscus
ENSMGAG00000014515	SCAF4	59	83.333	ENSPPRG00000000635	SCAF4	100	76.822	Panthera_pardus
ENSMGAG00000014515	SCAF4	59	84.227	ENSPTIG00000021578	SCAF4	99	75.530	Panthera_tigris_altaica
ENSMGAG00000014515	SCAF4	59	83.462	ENSPTRG00000013848	SCAF4	99	76.281	Pan_troglodytes
ENSMGAG00000014515	SCAF4	59	83.308	ENSPANG00000017332	SCAF4	99	76.270	Papio_anubis
ENSMGAG00000014515	SCAF4	66	62.683	ENSPKIG00000022408	scaf4a	95	63.357	Paramormyrops_kingsleyae
ENSMGAG00000014515	SCAF4	99	89.279	ENSPSIG00000014242	SCAF4	97	88.355	Pelodiscus_sinensis
ENSMGAG00000014515	SCAF4	63	85.401	ENSPCIG00000028183	SCAF4	91	78.506	Phascolarctos_cinereus
ENSMGAG00000014515	SCAF4	67	57.540	ENSPLAG00000001972	scaf4a	80	56.534	Poecilia_latipinna
ENSMGAG00000014515	SCAF4	63	54.779	ENSPLAG00000004403	-	59	60.784	Poecilia_latipinna
ENSMGAG00000014515	SCAF4	59	83.308	ENSPPYG00000011355	SCAF4	100	76.357	Pongo_abelii
ENSMGAG00000014515	SCAF4	89	88.930	ENSPCAG00000009998	SCAF4	93	88.364	Procavia_capensis
ENSMGAG00000014515	SCAF4	99	74.202	ENSPCOG00000018710	SCAF4	99	76.304	Propithecus_coquereli
ENSMGAG00000014515	SCAF4	100	75.507	ENSPVAG00000005220	SCAF4	99	76.815	Pteropus_vampyrus
ENSMGAG00000014515	SCAF4	64	67.222	ENSRNOG00000002104	Scaf4	99	75.000	Rattus_norvegicus
ENSMGAG00000014515	SCAF4	58	82.726	ENSRBIG00000040007	SCAF4	99	74.737	Rhinopithecus_bieti
ENSMGAG00000014515	SCAF4	59	83.767	ENSRROG00000029488	SCAF4	99	76.501	Rhinopithecus_roxellana
ENSMGAG00000014515	SCAF4	100	78.494	ENSSHAG00000001581	SCAF4	99	78.857	Sarcophilus_harrisii
ENSMGAG00000014515	SCAF4	87	50.854	ENSSFOG00015006338	scaf4a	98	51.109	Scleropages_formosus
ENSMGAG00000014515	SCAF4	69	59.542	ENSSMAG00000003738	scaf4b	55	71.023	Scophthalmus_maximus
ENSMGAG00000014515	SCAF4	85	50.598	ENSSMAG00000017901	scaf4a	56	53.259	Scophthalmus_maximus
ENSMGAG00000014515	SCAF4	85	51.652	ENSSDUG00000012918	scaf4a	57	57.977	Seriola_dumerili
ENSMGAG00000014515	SCAF4	85	51.859	ENSSLDG00000021671	scaf4a	57	58.226	Seriola_lalandi_dorsalis
ENSMGAG00000014515	SCAF4	58	83.072	ENSSARG00000009994	SCAF4	99	74.739	Sorex_araneus
ENSMGAG00000014515	SCAF4	59	82.443	ENSSSCG00000021023	SCAF4	99	74.090	Sus_scrofa
ENSMGAG00000014515	SCAF4	77	94.643	ENSTGUG00000013464	SCAF4	95	89.733	Taeniopygia_guttata
ENSMGAG00000014515	SCAF4	53	54.110	ENSTRUG00000009536	-	68	56.561	Takifugu_rubripes
ENSMGAG00000014515	SCAF4	59	84.137	ENSTTRG00000010963	SCAF4	100	76.740	Tursiops_truncatus
ENSMGAG00000014515	SCAF4	59	83.540	ENSUAMG00000008860	SCAF4	99	76.237	Ursus_americanus
ENSMGAG00000014515	SCAF4	58	84.286	ENSUMAG00000016962	SCAF4	100	78.623	Ursus_maritimus
ENSMGAG00000014515	SCAF4	58	84.038	ENSVVUG00000002953	SCAF4	100	77.148	Vulpes_vulpes
ENSMGAG00000014515	SCAF4	99	58.414	ENSXETG00000007351	scaf4	99	57.143	Xenopus_tropicalis