EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000015134 (Gene tree)
Gene ID: -
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 35591 bases
Position: chr1:186733544-186769134
Accession: 20320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000016047	RRM_1	PF00076.22	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000017017	PSPC1-201	1506	-	ENSMGAP00000016047	406 (aa)	-	G1NQG1

Gene Model

Click here to download ENSMGAG00000015134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000015134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000015134	PSPC1	100	59.952	ENSMGAG00000008869	NONO	87	59.569
ENSMGAG00000015134	PSPC1	100	59.169	ENSMGAG00000004237	SFPQ	87	62.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000015134	PSPC1	100	93.596	ENSG00000121390	PSPC1	77	93.596	Homo_sapiens
ENSMGAG00000015134	PSPC1	100	68.471	ENSAPOG00000015946	pspc1	77	67.780	Acanthochromis_polyacanthus
ENSMGAG00000015134	PSPC1	100	93.596	ENSAMEG00000017420	PSPC1	78	93.596	Ailuropoda_melanoleuca
ENSMGAG00000015134	PSPC1	100	59.615	ENSACIG00000018695	pspc1	75	56.971	Amphilophus_citrinellus
ENSMGAG00000015134	PSPC1	100	67.453	ENSAOCG00000005279	pspc1	77	66.667	Amphiprion_ocellaris
ENSMGAG00000015134	PSPC1	100	68.193	ENSAPEG00000015927	pspc1	77	67.464	Amphiprion_percula
ENSMGAG00000015134	PSPC1	100	54.327	ENSATEG00000004878	pspc1	76	54.808	Anabas_testudineus
ENSMGAG00000015134	PSPC1	99	99.752	ENSAPLG00000006246	PSPC1	100	99.752	Anas_platyrhynchos
ENSMGAG00000015134	PSPC1	100	58.680	ENSAPLG00000003643	SFPQ	72	57.457	Anas_platyrhynchos
ENSMGAG00000015134	PSPC1	100	53.301	ENSACAG00000013307	-	59	54.279	Anolis_carolinensis
ENSMGAG00000015134	PSPC1	100	92.910	ENSACAG00000002093	PSPC1	77	93.154	Anolis_carolinensis
ENSMGAG00000015134	PSPC1	100	93.350	ENSANAG00000000059	PSPC1	78	93.350	Aotus_nancymaae
ENSMGAG00000015134	PSPC1	100	57.353	ENSACLG00000027220	pspc1	76	56.448	Astatotilapia_calliptera
ENSMGAG00000015134	PSPC1	100	71.734	ENSAMXG00000036881	pspc1	78	70.071	Astyanax_mexicanus
ENSMGAG00000015134	PSPC1	100	93.350	ENSBTAG00000003934	PSPC1	78	93.350	Bos_taurus
ENSMGAG00000015134	PSPC1	100	93.596	ENSCJAG00000004554	PSPC1	78	93.596	Callithrix_jacchus
ENSMGAG00000015134	PSPC1	100	93.596	ENSCAFG00020002009	PSPC1	78	93.596	Canis_lupus_dingo
ENSMGAG00000015134	PSPC1	100	93.350	ENSCHIG00000016708	PSPC1	78	93.350	Capra_hircus
ENSMGAG00000015134	PSPC1	99	87.129	ENSTSYG00000032882	PSPC1	90	83.942	Carlito_syrichta
ENSMGAG00000015134	PSPC1	100	92.611	ENSCPOG00000000395	PSPC1	78	92.611	Cavia_porcellus
ENSMGAG00000015134	PSPC1	100	93.350	ENSCCAG00000033498	PSPC1	78	93.350	Cebus_capucinus
ENSMGAG00000015134	PSPC1	100	93.596	ENSCATG00000036434	PSPC1	77	93.596	Cercocebus_atys
ENSMGAG00000015134	PSPC1	99	94.000	ENSCLAG00000005241	PSPC1	89	93.766	Chinchilla_lanigera
ENSMGAG00000015134	PSPC1	100	86.207	ENSCHOG00000008913	PSPC1	77	87.685	Choloepus_hoffmanni
ENSMGAG00000015134	PSPC1	100	97.537	ENSCPBG00000020859	PSPC1	78	97.537	Chrysemys_picta_bellii
ENSMGAG00000015134	PSPC1	65	59.091	ENSCSAVG00000003533	-	50	57.303	Ciona_savignyi
ENSMGAG00000015134	PSPC1	100	81.281	ENSCANG00000018948	PSPC1	87	96.591	Colobus_angolensis_palliatus
ENSMGAG00000015134	PSPC1	100	92.857	ENSCGRG00001018368	Pspc1	78	92.857	Cricetulus_griseus_chok1gshd
ENSMGAG00000015134	PSPC1	100	92.857	ENSCGRG00000011724	Pspc1	78	92.857	Cricetulus_griseus_crigri
ENSMGAG00000015134	PSPC1	100	64.303	ENSCVAG00000007679	-	77	62.679	Cyprinodon_variegatus
ENSMGAG00000015134	PSPC1	100	70.264	ENSDARG00000006621	pspc1	100	69.157	Danio_rerio
ENSMGAG00000015134	PSPC1	100	93.350	ENSDNOG00000011078	PSPC1	77	93.350	Dasypus_novemcinctus
ENSMGAG00000015134	PSPC1	100	93.842	ENSDORG00000016050	Pspc1	78	93.842	Dipodomys_ordii
ENSMGAG00000015134	PSPC1	71	98.020	ENSETEG00000000502	-	72	98.020	Echinops_telfairi
ENSMGAG00000015134	PSPC1	57	47.843	ENSEBUG00000010133	pspc1	58	51.339	Eptatretus_burgeri
ENSMGAG00000015134	PSPC1	100	55.841	ENSEBUG00000003964	-	52	70.934	Eptatretus_burgeri
ENSMGAG00000015134	PSPC1	100	93.596	ENSEASG00005000119	PSPC1	78	93.596	Equus_asinus_asinus
ENSMGAG00000015134	PSPC1	100	93.596	ENSECAG00000017286	PSPC1	78	93.596	Equus_caballus
ENSMGAG00000015134	PSPC1	84	80.882	ENSEEUG00000011288	-	52	81.967	Erinaceus_europaeus
ENSMGAG00000015134	PSPC1	100	71.053	ENSELUG00000003746	pspc1	77	70.546	Esox_lucius
ENSMGAG00000015134	PSPC1	100	93.842	ENSFCAG00000027841	PSPC1	78	93.842	Felis_catus
ENSMGAG00000015134	PSPC1	100	98.522	ENSFALG00000008750	PSPC1	77	98.522	Ficedula_albicollis
ENSMGAG00000015134	PSPC1	100	92.611	ENSFDAG00000002617	PSPC1	79	92.611	Fukomys_damarensis
ENSMGAG00000015134	PSPC1	100	64.477	ENSGMOG00000015074	pspc1	75	63.415	Gadus_morhua
ENSMGAG00000015134	PSPC1	100	98.768	ENSGALG00000017142	PSPC1	78	98.768	Gallus_gallus
ENSMGAG00000015134	PSPC1	66	77.778	ENSGAFG00000006327	pspc1	56	77.778	Gambusia_affinis
ENSMGAG00000015134	PSPC1	99	63.570	ENSGACG00000014901	pspc1	76	72.059	Gasterosteus_aculeatus
ENSMGAG00000015134	PSPC1	100	97.537	ENSGAGG00000019164	PSPC1	78	97.537	Gopherus_agassizii
ENSMGAG00000015134	PSPC1	100	57.524	ENSGAGG00000017325	-	58	56.311	Gopherus_agassizii
ENSMGAG00000015134	PSPC1	100	93.350	ENSGGOG00000003414	PSPC1	77	93.350	Gorilla_gorilla
ENSMGAG00000015134	PSPC1	100	67.883	ENSHBUG00000001139	pspc1	77	67.397	Haplochromis_burtoni
ENSMGAG00000015134	PSPC1	100	92.611	ENSHGLG00000018811	PSPC1	78	92.611	Heterocephalus_glaber_female
ENSMGAG00000015134	PSPC1	57	96.552	ENSHGLG00100007962	PSPC1	71	96.552	Heterocephalus_glaber_male
ENSMGAG00000015134	PSPC1	79	70.427	ENSHCOG00000013251	pspc1	72	68.519	Hippocampus_comes
ENSMGAG00000015134	PSPC1	100	70.913	ENSIPUG00000013192	pspc1	77	70.142	Ictalurus_punctatus
ENSMGAG00000015134	PSPC1	100	93.596	ENSSTOG00000026833	PSPC1	77	93.596	Ictidomys_tridecemlineatus
ENSMGAG00000015134	PSPC1	100	92.857	ENSJJAG00000018334	Pspc1	78	92.857	Jaculus_jaculus
ENSMGAG00000015134	PSPC1	100	51.095	ENSKMAG00000013525	-	72	52.927	Kryptolebias_marmoratus
ENSMGAG00000015134	PSPC1	99	65.105	ENSLBEG00000004474	pspc1	65	71.389	Labrus_bergylta
ENSMGAG00000015134	PSPC1	100	86.946	ENSLACG00000010762	PSPC1	77	86.946	Latimeria_chalumnae
ENSMGAG00000015134	PSPC1	100	84.483	ENSLOCG00000010832	pspc1	80	84.483	Lepisosteus_oculatus
ENSMGAG00000015134	PSPC1	100	93.596	ENSLAFG00000010968	PSPC1	78	93.596	Loxodonta_africana
ENSMGAG00000015134	PSPC1	100	93.596	ENSMFAG00000032728	PSPC1	77	93.596	Macaca_fascicularis
ENSMGAG00000015134	PSPC1	100	93.596	ENSMMUG00000020262	PSPC1	77	93.596	Macaca_mulatta
ENSMGAG00000015134	PSPC1	100	93.596	ENSMNEG00000027401	PSPC1	77	93.596	Macaca_nemestrina
ENSMGAG00000015134	PSPC1	99	94.750	ENSMLEG00000039043	PSPC1	94	94.750	Mandrillus_leucophaeus
ENSMGAG00000015134	PSPC1	100	66.047	ENSMAMG00000004333	pspc1	68	70.292	Mastacembelus_armatus
ENSMGAG00000015134	PSPC1	100	57.353	ENSMZEG00005005726	pspc1	76	56.448	Maylandia_zebra
ENSMGAG00000015134	PSPC1	85	86.957	ENSMAUG00000021067	Pspc1	73	86.957	Mesocricetus_auratus
ENSMGAG00000015134	PSPC1	100	93.350	ENSMICG00000013970	PSPC1	78	93.350	Microcebus_murinus
ENSMGAG00000015134	PSPC1	100	93.350	ENSMOCG00000006060	Pspc1	78	93.350	Microtus_ochrogaster
ENSMGAG00000015134	PSPC1	91	92.391	ENSMODG00000008029	PSPC1	59	92.391	Monodelphis_domestica
ENSMGAG00000015134	PSPC1	100	67.391	ENSMALG00000008914	pspc1	76	66.344	Monopterus_albus
ENSMGAG00000015134	PSPC1	100	93.103	MGP_CAROLIEiJ_G0019341	Pspc1	78	93.103	Mus_caroli
ENSMGAG00000015134	PSPC1	100	93.350	ENSMUSG00000021938	Pspc1	78	93.350	Mus_musculus
ENSMGAG00000015134	PSPC1	100	93.103	MGP_PahariEiJ_G0030359	Pspc1	78	93.103	Mus_pahari
ENSMGAG00000015134	PSPC1	100	93.350	MGP_SPRETEiJ_G0020232	Pspc1	78	93.350	Mus_spretus
ENSMGAG00000015134	PSPC1	100	93.596	ENSMPUG00000013347	PSPC1	78	93.596	Mustela_putorius_furo
ENSMGAG00000015134	PSPC1	100	92.421	ENSMLUG00000017663	PSPC1	78	92.421	Myotis_lucifugus
ENSMGAG00000015134	PSPC1	100	93.103	ENSNGAG00000011271	Pspc1	78	93.103	Nannospalax_galili
ENSMGAG00000015134	PSPC1	66	67.658	ENSNBRG00000014059	pspc1	63	68.773	Neolamprologus_brichardi
ENSMGAG00000015134	PSPC1	100	93.596	ENSNLEG00000001294	PSPC1	78	93.596	Nomascus_leucogenys
ENSMGAG00000015134	PSPC1	80	94.203	ENSMEUG00000000476	PSPC1	62	94.203	Notamacropus_eugenii
ENSMGAG00000015134	PSPC1	100	78.818	ENSODEG00000007817	-	77	78.818	Octodon_degus
ENSMGAG00000015134	PSPC1	100	80.529	ENSODEG00000019012	-	78	82.212	Octodon_degus
ENSMGAG00000015134	PSPC1	100	68.932	ENSONIG00000012010	pspc1	76	66.508	Oreochromis_niloticus
ENSMGAG00000015134	PSPC1	100	66.667	ENSOANG00000011381	-	80	65.441	Ornithorhynchus_anatinus
ENSMGAG00000015134	PSPC1	99	94.000	ENSOANG00000009017	-	100	94.000	Ornithorhynchus_anatinus
ENSMGAG00000015134	PSPC1	100	93.350	ENSOCUG00000006153	PSPC1	77	93.350	Oryctolagus_cuniculus
ENSMGAG00000015134	PSPC1	100	68.370	ENSORLG00000004232	-	76	64.524	Oryzias_latipes
ENSMGAG00000015134	PSPC1	100	68.613	ENSORLG00020000578	PSPC1	76	64.762	Oryzias_latipes_hni
ENSMGAG00000015134	PSPC1	100	68.613	ENSORLG00015017480	pspc1	76	64.524	Oryzias_latipes_hsok
ENSMGAG00000015134	PSPC1	52	83.333	ENSOMEG00000003779	pspc1	95	83.654	Oryzias_melastigma
ENSMGAG00000015134	PSPC1	100	93.842	ENSOGAG00000012643	PSPC1	77	93.842	Otolemur_garnettii
ENSMGAG00000015134	PSPC1	100	92.892	ENSOARG00000014163	PSPC1	84	90.196	Ovis_aries
ENSMGAG00000015134	PSPC1	100	85.714	ENSPPAG00000009836	PSPC1	76	95.167	Pan_paniscus
ENSMGAG00000015134	PSPC1	100	93.842	ENSPPRG00000008833	PSPC1	78	93.842	Panthera_pardus
ENSMGAG00000015134	PSPC1	99	94.776	ENSPTIG00000016917	PSPC1	84	94.776	Panthera_tigris_altaica
ENSMGAG00000015134	PSPC1	91	94.038	ENSPTRG00000005677	PSPC1	75	94.038	Pan_troglodytes
ENSMGAG00000015134	PSPC1	100	93.596	ENSPANG00000001992	PSPC1	77	93.596	Papio_anubis
ENSMGAG00000015134	PSPC1	91	77.027	ENSPKIG00000003578	pspc1	78	72.792	Paramormyrops_kingsleyae
ENSMGAG00000015134	PSPC1	100	96.305	ENSPSIG00000005168	PSPC1	77	96.305	Pelodiscus_sinensis
ENSMGAG00000015134	PSPC1	57	75.966	ENSPMGG00000015135	pspc1	64	76.190	Periophthalmus_magnuspinnatus
ENSMGAG00000015134	PSPC1	100	93.103	ENSPEMG00000015214	Pspc1	78	93.103	Peromyscus_maniculatus_bairdii
ENSMGAG00000015134	PSPC1	50	49.282	ENSPMAG00000004618	pspc1	64	49.282	Petromyzon_marinus
ENSMGAG00000015134	PSPC1	100	92.365	ENSPCIG00000017680	PSPC1	78	92.365	Phascolarctos_cinereus
ENSMGAG00000015134	PSPC1	100	66.988	ENSPFOG00000003362	pspc1	77	66.184	Poecilia_formosa
ENSMGAG00000015134	PSPC1	100	66.988	ENSPLAG00000011540	pspc1	76	66.184	Poecilia_latipinna
ENSMGAG00000015134	PSPC1	100	66.747	ENSPMEG00000008322	pspc1	76	65.942	Poecilia_mexicana
ENSMGAG00000015134	PSPC1	100	66.988	ENSPREG00000007786	pspc1	76	66.184	Poecilia_reticulata
ENSMGAG00000015134	PSPC1	100	93.103	ENSPPYG00000005186	PSPC1	78	93.103	Pongo_abelii
ENSMGAG00000015134	PSPC1	100	87.931	ENSPCOG00000014364	PSPC1	77	87.931	Propithecus_coquereli
ENSMGAG00000015134	PSPC1	100	91.379	ENSPVAG00000005036	PSPC1	78	91.379	Pteropus_vampyrus
ENSMGAG00000015134	PSPC1	100	57.353	ENSPNYG00000008893	pspc1	76	56.448	Pundamilia_nyererei
ENSMGAG00000015134	PSPC1	100	70.673	ENSPNAG00000016511	pspc1	78	71.154	Pygocentrus_nattereri
ENSMGAG00000015134	PSPC1	100	92.857	ENSRNOG00000020782	Pspc1	78	92.857	Rattus_norvegicus
ENSMGAG00000015134	PSPC1	100	93.596	ENSRBIG00000036057	PSPC1	83	93.596	Rhinopithecus_bieti
ENSMGAG00000015134	PSPC1	100	93.596	ENSRROG00000036334	PSPC1	77	93.596	Rhinopithecus_roxellana
ENSMGAG00000015134	PSPC1	100	86.207	ENSSBOG00000028172	PSPC1	88	95.911	Saimiri_boliviensis_boliviensis
ENSMGAG00000015134	PSPC1	100	85.784	ENSSHAG00000004696	PSPC1	78	85.784	Sarcophilus_harrisii
ENSMGAG00000015134	PSPC1	91	77.568	ENSSFOG00015001395	pspc1	88	72.922	Scleropages_formosus
ENSMGAG00000015134	PSPC1	100	65.311	ENSSMAG00000001761	pspc1	68	76.000	Scophthalmus_maximus
ENSMGAG00000015134	PSPC1	100	67.206	ENSSDUG00000010651	pspc1	65	74.044	Seriola_dumerili
ENSMGAG00000015134	PSPC1	100	61.275	ENSSLDG00000004284	pspc1	75	56.368	Seriola_lalandi_dorsalis
ENSMGAG00000015134	PSPC1	100	85.468	ENSSARG00000000888	PSPC1	78	85.468	Sorex_araneus
ENSMGAG00000015134	PSPC1	100	51.699	ENSSPUG00000001136	-	50	53.501	Sphenodon_punctatus
ENSMGAG00000015134	PSPC1	100	80.590	ENSSPUG00000008550	PSPC1	76	81.081	Sphenodon_punctatus
ENSMGAG00000015134	PSPC1	100	66.282	ENSSPAG00000001921	pspc1	65	72.829	Stegastes_partitus
ENSMGAG00000015134	PSPC1	100	93.596	ENSSSCG00000009569	PSPC1	78	93.596	Sus_scrofa
ENSMGAG00000015134	PSPC1	100	98.522	ENSTGUG00000011295	PSPC1	87	98.522	Taeniopygia_guttata
ENSMGAG00000015134	PSPC1	100	62.740	ENSTRUG00000011335	pspc1	77	62.287	Takifugu_rubripes
ENSMGAG00000015134	PSPC1	100	64.234	ENSTNIG00000010358	pspc1	76	62.927	Tetraodon_nigroviridis
ENSMGAG00000015134	PSPC1	99	79.750	ENSTBEG00000002361	PSPC1	77	77.340	Tupaia_belangeri
ENSMGAG00000015134	PSPC1	100	93.596	ENSTTRG00000003343	PSPC1	78	93.596	Tursiops_truncatus
ENSMGAG00000015134	PSPC1	57	96.567	ENSUAMG00000012309	PSPC1	67	96.567	Ursus_americanus
ENSMGAG00000015134	PSPC1	100	93.350	ENSUMAG00000013993	PSPC1	83	93.350	Ursus_maritimus
ENSMGAG00000015134	PSPC1	99	94.750	ENSVPAG00000010029	PSPC1	100	94.750	Vicugna_pacos
ENSMGAG00000015134	PSPC1	100	93.596	ENSVVUG00000006414	PSPC1	78	93.596	Vulpes_vulpes
ENSMGAG00000015134	PSPC1	66	76.667	ENSXCOG00000017438	pspc1	64	76.667	Xiphophorus_couchianus
ENSMGAG00000015134	PSPC1	66	77.037	ENSXMAG00000007929	pspc1	64	77.037	Xiphophorus_maculatus