EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000015532 (Gene tree)
Gene ID: 100551140
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 3605 bases
Position: chr1:145886014-145889618
Accession: 100551140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000016474	RNA_ligase	PF09414.10	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000017448	LIG4-201	3605	XM_003203219	ENSMGAP00000016474	912 (aa)	XP_003203267	G1NR93

Gene Model

Click here to download ENSMGAG00000015532's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000015532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000015532	LIG4	99	76.619	ENSG00000174405	LIG4	100	76.659	Homo_sapiens
ENSMGAG00000015532	LIG4	100	66.447	ENSAPOG00000000866	lig4	100	66.447	Acanthochromis_polyacanthus
ENSMGAG00000015532	LIG4	99	73.085	ENSAMEG00000019685	LIG4	99	73.085	Ailuropoda_melanoleuca
ENSMGAG00000015532	LIG4	99	66.520	ENSACIG00000018309	lig4	99	66.520	Amphilophus_citrinellus
ENSMGAG00000015532	LIG4	100	66.118	ENSAOCG00000011768	lig4	100	66.118	Amphiprion_ocellaris
ENSMGAG00000015532	LIG4	100	66.228	ENSAPEG00000017815	lig4	100	66.228	Amphiprion_percula
ENSMGAG00000015532	LIG4	100	65.461	ENSATEG00000005583	lig4	100	65.789	Anabas_testudineus
ENSMGAG00000015532	LIG4	96	92.816	ENSAPLG00000001673	LIG4	99	92.816	Anas_platyrhynchos
ENSMGAG00000015532	LIG4	99	79.515	ENSACAG00000014566	LIG4	100	79.515	Anolis_carolinensis
ENSMGAG00000015532	LIG4	99	75.192	ENSANAG00000012446	LIG4	99	75.192	Aotus_nancymaae
ENSMGAG00000015532	LIG4	99	66.081	ENSACLG00000027051	lig4	99	66.081	Astatotilapia_calliptera
ENSMGAG00000015532	LIG4	99	66.038	ENSAMXG00000008192	lig4	93	66.038	Astyanax_mexicanus
ENSMGAG00000015532	LIG4	100	74.563	ENSBTAG00000015868	LIG4	100	74.563	Bos_taurus
ENSMGAG00000015532	LIG4	100	75.000	ENSCJAG00000014689	LIG4	100	75.000	Callithrix_jacchus
ENSMGAG00000015532	LIG4	100	74.017	ENSCAFG00000006031	LIG4	100	74.017	Canis_familiaris
ENSMGAG00000015532	LIG4	100	74.017	ENSCAFG00020021230	LIG4	100	74.017	Canis_lupus_dingo
ENSMGAG00000015532	LIG4	99	74.753	ENSCHIG00000001019	LIG4	100	74.345	Capra_hircus
ENSMGAG00000015532	LIG4	99	74.972	ENSCAPG00000006284	LIG4	99	74.972	Cavia_aperea
ENSMGAG00000015532	LIG4	99	74.643	ENSCPOG00000014266	LIG4	99	74.643	Cavia_porcellus
ENSMGAG00000015532	LIG4	99	75.412	ENSCCAG00000019971	LIG4	99	75.412	Cebus_capucinus
ENSMGAG00000015532	LIG4	100	75.109	ENSCATG00000021075	LIG4	100	75.109	Cercocebus_atys
ENSMGAG00000015532	LIG4	100	73.908	ENSCLAG00000003376	LIG4	100	73.908	Chinchilla_lanigera
ENSMGAG00000015532	LIG4	100	75.546	ENSCSAG00000000211	LIG4	100	75.546	Chlorocebus_sabaeus
ENSMGAG00000015532	LIG4	99	84.735	ENSCPBG00000023291	LIG4	100	84.481	Chrysemys_picta_bellii
ENSMGAG00000015532	LIG4	68	45.959	ENSCING00000009536	-	96	45.959	Ciona_intestinalis
ENSMGAG00000015532	LIG4	83	45.729	ENSCSAVG00000010336	-	98	45.729	Ciona_savignyi
ENSMGAG00000015532	LIG4	100	75.000	ENSCANG00000005805	LIG4	100	75.000	Colobus_angolensis_palliatus
ENSMGAG00000015532	LIG4	100	73.391	ENSCGRG00001012072	Lig4	100	73.391	Cricetulus_griseus_chok1gshd
ENSMGAG00000015532	LIG4	100	73.391	ENSCGRG00000013417	Lig4	100	73.391	Cricetulus_griseus_crigri
ENSMGAG00000015532	LIG4	97	66.254	ENSCSEG00000013905	lig4	96	66.254	Cynoglossus_semilaevis
ENSMGAG00000015532	LIG4	100	66.009	ENSCVAG00000007896	lig4	100	66.009	Cyprinodon_variegatus
ENSMGAG00000015532	LIG4	100	65.351	ENSDARG00000060620	lig4	100	65.351	Danio_rerio
ENSMGAG00000015532	LIG4	100	75.136	ENSDNOG00000000513	LIG4	100	75.136	Dasypus_novemcinctus
ENSMGAG00000015532	LIG4	99	75.111	ENSDORG00000027303	Lig4	99	75.111	Dipodomys_ordii
ENSMGAG00000015532	LIG4	85	32.681	FBgn0030506	Lig4	87	32.681	Drosophila_melanogaster
ENSMGAG00000015532	LIG4	98	72.949	ENSETEG00000015563	LIG4	100	73.171	Echinops_telfairi
ENSMGAG00000015532	LIG4	98	42.934	ENSEBUG00000014243	lig4	98	42.736	Eptatretus_burgeri
ENSMGAG00000015532	LIG4	100	74.563	ENSEASG00005022073	LIG4	99	74.973	Equus_asinus_asinus
ENSMGAG00000015532	LIG4	100	74.127	ENSECAG00000003257	LIG4	100	74.127	Equus_caballus
ENSMGAG00000015532	LIG4	99	66.850	ENSELUG00000006787	lig4	99	66.850	Esox_lucius
ENSMGAG00000015532	LIG4	100	73.799	ENSFCAG00000031985	LIG4	100	73.799	Felis_catus
ENSMGAG00000015532	LIG4	89	91.615	ENSFALG00000004214	LIG4	99	91.615	Ficedula_albicollis
ENSMGAG00000015532	LIG4	100	74.236	ENSFDAG00000008973	LIG4	100	74.236	Fukomys_damarensis
ENSMGAG00000015532	LIG4	100	65.646	ENSFHEG00000007398	lig4	91	65.646	Fundulus_heteroclitus
ENSMGAG00000015532	LIG4	85	63.707	ENSGMOG00000012843	lig4	99	63.707	Gadus_morhua
ENSMGAG00000015532	LIG4	100	97.149	ENSGALG00000016854	LIG4	100	97.149	Gallus_gallus
ENSMGAG00000015532	LIG4	98	66.444	ENSGAFG00000019779	lig4	95	66.371	Gambusia_affinis
ENSMGAG00000015532	LIG4	99	64.168	ENSGACG00000014135	lig4	99	64.168	Gasterosteus_aculeatus
ENSMGAG00000015532	LIG4	99	76.400	ENSGGOG00000027771	LIG4	99	76.400	Gorilla_gorilla
ENSMGAG00000015532	LIG4	99	65.862	ENSHBUG00000006245	lig4	99	65.862	Haplochromis_burtoni
ENSMGAG00000015532	LIG4	100	74.127	ENSHGLG00000000718	LIG4	100	74.127	Heterocephalus_glaber_female
ENSMGAG00000015532	LIG4	100	74.127	ENSHGLG00100003265	LIG4	100	74.127	Heterocephalus_glaber_male
ENSMGAG00000015532	LIG4	98	65.590	ENSHCOG00000012010	lig4	98	65.590	Hippocampus_comes
ENSMGAG00000015532	LIG4	100	66.375	ENSIPUG00000013748	lig4	100	66.375	Ictalurus_punctatus
ENSMGAG00000015532	LIG4	99	73.875	ENSSTOG00000024303	LIG4	99	73.875	Ictidomys_tridecemlineatus
ENSMGAG00000015532	LIG4	100	73.362	ENSJJAG00000006750	Lig4	100	73.362	Jaculus_jaculus
ENSMGAG00000015532	LIG4	100	64.583	ENSKMAG00000001149	lig4	100	64.583	Kryptolebias_marmoratus
ENSMGAG00000015532	LIG4	91	66.104	ENSLBEG00000014578	lig4	100	66.104	Labrus_bergylta
ENSMGAG00000015532	LIG4	100	73.823	ENSLACG00000003282	LIG4	100	73.823	Latimeria_chalumnae
ENSMGAG00000015532	LIG4	100	69.945	ENSLOCG00000008901	lig4	99	69.945	Lepisosteus_oculatus
ENSMGAG00000015532	LIG4	99	73.494	ENSLAFG00000031152	LIG4	99	73.494	Loxodonta_africana
ENSMGAG00000015532	LIG4	100	75.437	ENSMFAG00000037235	LIG4	100	75.437	Macaca_fascicularis
ENSMGAG00000015532	LIG4	100	75.218	ENSMMUG00000008874	LIG4	100	75.218	Macaca_mulatta
ENSMGAG00000015532	LIG4	100	75.437	ENSMNEG00000023575	LIG4	100	75.437	Macaca_nemestrina
ENSMGAG00000015532	LIG4	100	75.218	ENSMLEG00000026720	LIG4	100	75.218	Mandrillus_leucophaeus
ENSMGAG00000015532	LIG4	100	66.338	ENSMAMG00000008472	lig4	99	66.338	Mastacembelus_armatus
ENSMGAG00000015532	LIG4	99	66.081	ENSMZEG00005001855	lig4	99	66.081	Maylandia_zebra
ENSMGAG00000015532	LIG4	100	71.834	ENSMOCG00000019000	Lig4	100	71.834	Microtus_ochrogaster
ENSMGAG00000015532	LIG4	99	65.628	ENSMMOG00000004390	lig4	99	65.628	Mola_mola
ENSMGAG00000015532	LIG4	99	76.821	ENSMODG00000025064	LIG4	99	77.067	Monodelphis_domestica
ENSMGAG00000015532	LIG4	99	66.073	ENSMALG00000008555	lig4	99	66.073	Monopterus_albus
ENSMGAG00000015532	LIG4	100	73.253	MGP_CAROLIEiJ_G0030809	Lig4	100	73.253	Mus_caroli
ENSMGAG00000015532	LIG4	100	72.926	ENSMUSG00000049717	Lig4	100	72.926	Mus_musculus
ENSMGAG00000015532	LIG4	100	73.362	MGP_PahariEiJ_G0021270	Lig4	100	73.362	Mus_pahari
ENSMGAG00000015532	LIG4	100	72.926	MGP_SPRETEiJ_G0031917	Lig4	100	72.926	Mus_spretus
ENSMGAG00000015532	LIG4	99	74.094	ENSMPUG00000018675	LIG4	99	74.094	Mustela_putorius_furo
ENSMGAG00000015532	LIG4	100	74.891	ENSMLUG00000001267	LIG4	100	74.891	Myotis_lucifugus
ENSMGAG00000015532	LIG4	99	73.216	ENSNGAG00000013258	Lig4	99	73.216	Nannospalax_galili
ENSMGAG00000015532	LIG4	99	65.862	ENSNBRG00000021252	lig4	99	65.862	Neolamprologus_brichardi
ENSMGAG00000015532	LIG4	99	76.070	ENSNLEG00000007888	LIG4	99	76.070	Nomascus_leucogenys
ENSMGAG00000015532	LIG4	100	72.926	ENSOPRG00000005765	LIG4	100	72.926	Ochotona_princeps
ENSMGAG00000015532	LIG4	100	74.017	ENSODEG00000019683	LIG4	100	74.017	Octodon_degus
ENSMGAG00000015532	LIG4	99	65.752	ENSONIG00000011969	lig4	99	65.752	Oreochromis_niloticus
ENSMGAG00000015532	LIG4	99	73.655	ENSOCUG00000015734	LIG4	99	73.655	Oryctolagus_cuniculus
ENSMGAG00000015532	LIG4	100	65.175	ENSORLG00000004041	lig4	100	65.175	Oryzias_latipes
ENSMGAG00000015532	LIG4	100	65.721	ENSORLG00020019607	lig4	100	65.721	Oryzias_latipes_hni
ENSMGAG00000015532	LIG4	100	65.393	ENSORLG00015017754	lig4	100	65.393	Oryzias_latipes_hsok
ENSMGAG00000015532	LIG4	75	69.432	ENSOMEG00000003459	lig4	99	69.432	Oryzias_melastigma
ENSMGAG00000015532	LIG4	100	74.127	ENSOGAG00000032120	LIG4	100	74.127	Otolemur_garnettii
ENSMGAG00000015532	LIG4	82	78.792	ENSOARG00000005590	LIG4	98	78.792	Ovis_aries
ENSMGAG00000015532	LIG4	99	76.070	ENSPPAG00000032998	LIG4	99	76.070	Pan_paniscus
ENSMGAG00000015532	LIG4	100	74.017	ENSPPRG00000017804	LIG4	100	74.017	Panthera_pardus
ENSMGAG00000015532	LIG4	100	74.127	ENSPTIG00000010051	LIG4	100	74.127	Panthera_tigris_altaica
ENSMGAG00000015532	LIG4	99	76.180	ENSPTRG00000006025	LIG4	99	76.180	Pan_troglodytes
ENSMGAG00000015532	LIG4	100	75.218	ENSPANG00000007562	LIG4	100	75.218	Papio_anubis
ENSMGAG00000015532	LIG4	100	67.325	ENSPKIG00000011645	lig4	99	67.325	Paramormyrops_kingsleyae
ENSMGAG00000015532	LIG4	100	84.228	ENSPSIG00000001504	LIG4	100	84.228	Pelodiscus_sinensis
ENSMGAG00000015532	LIG4	98	64.214	ENSPMGG00000013486	lig4	99	63.706	Periophthalmus_magnuspinnatus
ENSMGAG00000015532	LIG4	100	73.501	ENSPEMG00000000076	Lig4	100	73.501	Peromyscus_maniculatus_bairdii
ENSMGAG00000015532	LIG4	100	77.099	ENSPCIG00000021882	LIG4	100	77.099	Phascolarctos_cinereus
ENSMGAG00000015532	LIG4	98	66.629	ENSPFOG00000000797	lig4	98	66.556	Poecilia_formosa
ENSMGAG00000015532	LIG4	98	66.629	ENSPLAG00000001196	lig4	98	66.556	Poecilia_latipinna
ENSMGAG00000015532	LIG4	98	66.741	ENSPMEG00000021353	lig4	98	66.667	Poecilia_mexicana
ENSMGAG00000015532	LIG4	98	66.629	ENSPREG00000007323	lig4	98	66.556	Poecilia_reticulata
ENSMGAG00000015532	LIG4	99	75.741	ENSPPYG00000005540	LIG4	99	75.741	Pongo_abelii
ENSMGAG00000015532	LIG4	100	73.799	ENSPVAG00000016403	LIG4	100	73.799	Pteropus_vampyrus
ENSMGAG00000015532	LIG4	99	65.862	ENSPNYG00000009660	lig4	99	65.862	Pundamilia_nyererei
ENSMGAG00000015532	LIG4	99	66.518	ENSPNAG00000028069	LIG4	99	66.518	Pygocentrus_nattereri
ENSMGAG00000015532	LIG4	99	66.518	ENSPNAG00000028056	lig4	99	66.518	Pygocentrus_nattereri
ENSMGAG00000015532	LIG4	100	72.598	ENSRNOG00000014605	Lig4	100	72.598	Rattus_norvegicus
ENSMGAG00000015532	LIG4	100	73.908	ENSRBIG00000039962	LIG4	100	73.908	Rhinopithecus_bieti
ENSMGAG00000015532	LIG4	100	74.891	ENSRROG00000006040	LIG4	100	74.891	Rhinopithecus_roxellana
ENSMGAG00000015532	LIG4	99	75.412	ENSSBOG00000019029	LIG4	99	75.412	Saimiri_boliviensis_boliviensis
ENSMGAG00000015532	LIG4	100	73.799	ENSSHAG00000009525	LIG4	100	74.264	Sarcophilus_harrisii
ENSMGAG00000015532	LIG4	100	65.936	ENSSFOG00015012835	lig4	100	65.936	Scleropages_formosus
ENSMGAG00000015532	LIG4	100	62.829	ENSSMAG00000011267	lig4	100	62.829	Scophthalmus_maximus
ENSMGAG00000015532	LIG4	100	65.976	ENSSDUG00000010343	lig4	100	65.976	Seriola_dumerili
ENSMGAG00000015532	LIG4	99	64.989	ENSSLDG00000003239	lig4	99	64.989	Seriola_lalandi_dorsalis
ENSMGAG00000015532	LIG4	100	71.273	ENSSARG00000006573	LIG4	100	71.273	Sorex_araneus
ENSMGAG00000015532	LIG4	92	82.402	ENSSPUG00000002444	LIG4	100	82.402	Sphenodon_punctatus
ENSMGAG00000015532	LIG4	99	65.971	ENSSPAG00000001609	lig4	99	65.971	Stegastes_partitus
ENSMGAG00000015532	LIG4	99	74.753	ENSSSCG00000009540	LIG4	99	74.753	Sus_scrofa
ENSMGAG00000015532	LIG4	99	89.800	ENSTGUG00000010795	LIG4	99	89.800	Taeniopygia_guttata
ENSMGAG00000015532	LIG4	100	65.899	ENSTRUG00000009984	lig4	100	65.899	Takifugu_rubripes
ENSMGAG00000015532	LIG4	99	65.604	ENSTNIG00000010348	lig4	99	65.824	Tetraodon_nigroviridis
ENSMGAG00000015532	LIG4	100	74.782	ENSTBEG00000017741	LIG4	100	74.782	Tupaia_belangeri
ENSMGAG00000015532	LIG4	100	73.908	ENSTTRG00000012660	LIG4	100	73.908	Tursiops_truncatus
ENSMGAG00000015532	LIG4	99	73.436	ENSUAMG00000003773	LIG4	99	73.436	Ursus_americanus
ENSMGAG00000015532	LIG4	100	72.837	ENSXETG00000002654	lig4	100	72.837	Xenopus_tropicalis
ENSMGAG00000015532	LIG4	98	66.406	ENSXCOG00000017401	lig4	98	66.333	Xiphophorus_couchianus
ENSMGAG00000015532	LIG4	98	66.555	ENSXMAG00000015142	lig4	98	66.482	Xiphophorus_maculatus