EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000016603 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 3148 bases
Position: chr29:2322770-2325917
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	1	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	2	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	3	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	4	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	5	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	6	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	7	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	8	9
ENSMGAP00000001032	zf-C2H2	PF00096.26	1.7e-52	9	9
ENSMGAP00000001032	zf-met	PF12874.7	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000001681	-	1692	-	ENSMGAP00000001032	564 (aa)	-	G1MS11

Gene Model

Click here to download ENSMGAG00000016603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000016603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000016603	-	100	39.007	ENSMGAG00000001275	ZBTB48	92	39.007
ENSMGAG00000016603	-	100	34.483	ENSMGAG00000010710	PRDM5	76	34.483
ENSMGAG00000016603	-	75	40.441	ENSMGAG00000006129	GFI1B	66	40.441
ENSMGAG00000016603	-	100	35.495	ENSMGAG00000013362	-	100	38.021
ENSMGAG00000016603	-	99	31.250	ENSMGAG00000010352	ZNF521	80	31.250
ENSMGAG00000016603	-	59	37.984	ENSMGAG00000009447	SNAI1	70	35.915
ENSMGAG00000016603	-	100	31.340	ENSMGAG00000003137	GZF1	100	30.702
ENSMGAG00000016603	-	87	36.190	ENSMGAG00000008439	PATZ1	67	36.190
ENSMGAG00000016603	-	87	48.000	ENSMGAG00000016847	-	99	48.000
ENSMGAG00000016603	-	70	40.833	ENSMGAG00000001489	WT1	77	40.833
ENSMGAG00000016603	-	100	32.773	ENSMGAG00000012883	ZFAT	63	32.773
ENSMGAG00000016603	-	85	36.957	ENSMGAG00000002353	ZBTB47	52	35.638
ENSMGAG00000016603	-	54	38.235	ENSMGAG00000016579	SCRT2	64	38.235
ENSMGAG00000016603	-	76	34.586	ENSMGAG00000005397	HIC1	51	34.586
ENSMGAG00000016603	-	65	33.636	ENSMGAG00000010813	-	65	33.728

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000016603	-	100	44.444	ENSACAG00000026916	-	81	33.761	Anolis_carolinensis
ENSMGAG00000016603	-	100	36.429	ENSACAG00000027001	-	100	36.429	Anolis_carolinensis
ENSMGAG00000016603	-	100	35.154	ENSACAG00000026906	-	98	43.662	Anolis_carolinensis
ENSMGAG00000016603	-	100	41.026	ENSAMXG00000014745	-	95	38.298	Astyanax_mexicanus
ENSMGAG00000016603	-	100	30.744	ENSAMXG00000038122	-	94	50.000	Astyanax_mexicanus
ENSMGAG00000016603	-	100	30.337	ENSDARG00000096614	si:dkey-182i3.10	66	42.326	Danio_rerio
ENSMGAG00000016603	-	100	32.402	ENSELUG00000021525	-	66	32.099	Esox_lucius
ENSMGAG00000016603	-	100	41.935	ENSELUG00000013806	-	66	41.935	Esox_lucius
ENSMGAG00000016603	-	100	40.566	ENSELUG00000000485	-	97	33.245	Esox_lucius
ENSMGAG00000016603	-	89	42.254	ENSELUG00000011838	-	64	42.254	Esox_lucius
ENSMGAG00000016603	-	100	30.568	ENSELUG00000018970	-	86	30.996	Esox_lucius
ENSMGAG00000016603	-	100	44.545	ENSHCOG00000017456	-	93	44.545	Hippocampus_comes
ENSMGAG00000016603	-	100	43.363	ENSHCOG00000001629	-	64	43.363	Hippocampus_comes
ENSMGAG00000016603	-	100	35.714	ENSLBEG00000013235	-	85	35.714	Labrus_bergylta
ENSMGAG00000016603	-	100	36.201	ENSPNAG00000009176	-	87	36.201	Pygocentrus_nattereri
ENSMGAG00000016603	-	100	33.853	ENSPNAG00000009184	-	87	33.333	Pygocentrus_nattereri
ENSMGAG00000016603	-	99	42.177	ENSSFOG00015020993	-	86	41.333	Scleropages_formosus
ENSMGAG00000016603	-	100	35.000	ENSTNIG00000000528	-	99	35.000	Tetraodon_nigroviridis
ENSMGAG00000016603	-	100	45.370	ENSXMAG00000020042	-	69	45.370	Xiphophorus_maculatus