EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000000039 (Gene tree)
Gene ID: 105858313
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 23228 bases
Position: chr14:39656923-39680150
Accession: 105858313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000000036	Exo_endo_phos	PF03372.23	4.4e-08	1	1
ENSMICP00000048411	Exo_endo_phos	PF03372.23	8.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000069462	TDP2-201	4851	XM_012741350	ENSMICP00000048411	363 (aa)	XP_012596804	UPI0001772870
ENSMICT00000000039	TDP2-202	888	-	ENSMICP00000000036	295 (aa)	-	UPI000C2EB942

Gene Model

Click here to download ENSMICG00000000039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000000039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000000039	TDP2	100	87.789	ENSG00000111802	TDP2	100	88.705	Homo_sapiens
ENSMICG00000000039	TDP2	85	53.543	ENSAPOG00000018379	-	89	53.543	Acanthochromis_polyacanthus
ENSMICG00000000039	TDP2	94	88.129	ENSAMEG00000010230	TDP2	99	88.129	Ailuropoda_melanoleuca
ENSMICG00000000039	TDP2	62	53.261	ENSAOCG00000010081	-	81	53.261	Amphiprion_ocellaris
ENSMICG00000000039	TDP2	97	49.481	ENSAPEG00000004208	-	99	49.481	Amphiprion_percula
ENSMICG00000000039	TDP2	95	47.183	ENSATEG00000010663	-	92	47.183	Anabas_testudineus
ENSMICG00000000039	TDP2	94	67.626	ENSACAG00000002332	TDP2	92	66.272	Anolis_carolinensis
ENSMICG00000000039	TDP2	94	90.288	ENSANAG00000020033	TDP2	100	87.603	Aotus_nancymaae
ENSMICG00000000039	TDP2	93	48.551	ENSACLG00000016132	tdp2b	98	47.440	Astatotilapia_calliptera
ENSMICG00000000039	TDP2	91	54.444	ENSACLG00000016148	tdp2b	95	54.444	Astatotilapia_calliptera
ENSMICG00000000039	TDP2	93	48.188	ENSACLG00000016174	tdp2b	99	46.758	Astatotilapia_calliptera
ENSMICG00000000039	TDP2	96	47.751	ENSAMXG00000036549	tdp2a	94	47.751	Astyanax_mexicanus
ENSMICG00000000039	TDP2	93	58.909	ENSAMXG00000011775	tdp2b	98	51.596	Astyanax_mexicanus
ENSMICG00000000039	TDP2	95	87.544	ENSBTAG00000000365	TDP2	100	84.384	Bos_taurus
ENSMICG00000000039	TDP2	89	30.699	WBGene00013405	tdpt-1	90	30.946	Caenorhabditis_elegans
ENSMICG00000000039	TDP2	100	87.603	ENSCJAG00000006074	TDP2	100	87.603	Callithrix_jacchus
ENSMICG00000000039	TDP2	100	86.226	ENSCJAG00000021963	-	100	86.226	Callithrix_jacchus
ENSMICG00000000039	TDP2	97	87.108	ENSCAFG00000010428	TDP2	100	86.257	Canis_familiaris
ENSMICG00000000039	TDP2	97	87.108	ENSCAFG00020009994	TDP2	96	89.209	Canis_lupus_dingo
ENSMICG00000000039	TDP2	99	85.666	ENSCHIG00000015294	-	99	85.666	Capra_hircus
ENSMICG00000000039	TDP2	94	91.007	ENSTSYG00000037199	TDP2	100	88.997	Carlito_syrichta
ENSMICG00000000039	TDP2	95	92.115	ENSCPOG00000006390	TDP2	99	87.395	Cavia_porcellus
ENSMICG00000000039	TDP2	100	88.430	ENSCCAG00000022734	TDP2	100	88.430	Cebus_capucinus
ENSMICG00000000039	TDP2	100	87.459	ENSCATG00000022076	TDP2	99	87.459	Cercocebus_atys
ENSMICG00000000039	TDP2	95	92.832	ENSCLAG00000002072	TDP2	99	86.479	Chinchilla_lanigera
ENSMICG00000000039	TDP2	100	88.154	ENSCSAG00000007769	TDP2	100	88.154	Chlorocebus_sabaeus
ENSMICG00000000039	TDP2	95	73.477	ENSCPBG00000006551	TDP2	92	68.044	Chrysemys_picta_bellii
ENSMICG00000000039	TDP2	100	87.129	ENSCANG00000040122	TDP2	100	88.430	Colobus_angolensis_palliatus
ENSMICG00000000039	TDP2	94	73.022	ENSCGRG00001000384	Tdp2	99	65.583	Cricetulus_griseus_chok1gshd
ENSMICG00000000039	TDP2	94	73.022	ENSCGRG00000010250	Tdp2	97	65.909	Cricetulus_griseus_crigri
ENSMICG00000000039	TDP2	93	55.596	ENSCVAG00000003114	tdp2b	99	51.966	Cyprinodon_variegatus
ENSMICG00000000039	TDP2	83	49.388	ENSDARG00000069941	tdp2a	55	49.388	Danio_rerio
ENSMICG00000000039	TDP2	94	56.890	ENSDARG00000035954	tdp2b	95	52.893	Danio_rerio
ENSMICG00000000039	TDP2	100	85.124	ENSDNOG00000044082	TDP2	99	85.124	Dasypus_novemcinctus
ENSMICG00000000039	TDP2	94	84.532	ENSETEG00000019096	TDP2	100	84.532	Echinops_telfairi
ENSMICG00000000039	TDP2	89	53.759	ENSEBUG00000006535	tdp2a	62	53.759	Eptatretus_burgeri
ENSMICG00000000039	TDP2	95	88.929	ENSEASG00005007656	TDP2	100	86.226	Equus_asinus_asinus
ENSMICG00000000039	TDP2	95	89.247	ENSECAG00000014264	TDP2	100	86.226	Equus_caballus
ENSMICG00000000039	TDP2	95	84.643	ENSEEUG00000010776	TDP2	100	81.267	Erinaceus_europaeus
ENSMICG00000000039	TDP2	96	44.755	ENSELUG00000009321	tdp2a	93	43.624	Esox_lucius
ENSMICG00000000039	TDP2	93	55.556	ENSELUG00000016449	tdp2b	95	53.591	Esox_lucius
ENSMICG00000000039	TDP2	95	88.889	ENSFCAG00000025612	TDP2	98	86.686	Felis_catus
ENSMICG00000000039	TDP2	96	65.603	ENSFALG00000004710	TDP2	100	59.392	Ficedula_albicollis
ENSMICG00000000039	TDP2	95	89.680	ENSFDAG00000006512	TDP2	97	90.000	Fukomys_damarensis
ENSMICG00000000039	TDP2	83	51.210	ENSFHEG00000013560	-	84	51.210	Fundulus_heteroclitus
ENSMICG00000000039	TDP2	95	69.534	ENSGALG00000013637	TDP2	96	62.849	Gallus_gallus
ENSMICG00000000039	TDP2	96	73.404	ENSGAGG00000002853	TDP2	87	69.679	Gopherus_agassizii
ENSMICG00000000039	TDP2	100	87.459	ENSGGOG00000014237	TDP2	100	88.430	Gorilla_gorilla
ENSMICG00000000039	TDP2	96	53.073	ENSHBUG00000002714	tdp2b	99	53.073	Haplochromis_burtoni
ENSMICG00000000039	TDP2	71	56.938	ENSHBUG00000005421	-	87	56.938	Haplochromis_burtoni
ENSMICG00000000039	TDP2	95	89.606	ENSHGLG00000008655	TDP2	99	84.594	Heterocephalus_glaber_female
ENSMICG00000000039	TDP2	95	89.606	ENSHGLG00100019087	TDP2	99	84.594	Heterocephalus_glaber_male
ENSMICG00000000039	TDP2	93	57.091	ENSIPUG00000013691	tdp2b	94	53.631	Ictalurus_punctatus
ENSMICG00000000039	TDP2	95	70.609	ENSJJAG00000021685	Tdp2	100	63.912	Jaculus_jaculus
ENSMICG00000000039	TDP2	91	52.030	ENSKMAG00000015485	-	84	52.030	Kryptolebias_marmoratus
ENSMICG00000000039	TDP2	95	63.214	ENSLACG00000008852	TDP2	95	59.599	Latimeria_chalumnae
ENSMICG00000000039	TDP2	94	58.484	ENSLOCG00000005817	tdp2b	99	58.484	Lepisosteus_oculatus
ENSMICG00000000039	TDP2	95	88.172	ENSLAFG00000002567	TDP2	99	88.000	Loxodonta_africana
ENSMICG00000000039	TDP2	100	87.789	ENSMFAG00000045296	TDP2	100	88.430	Macaca_fascicularis
ENSMICG00000000039	TDP2	94	91.007	ENSMMUG00000009803	TDP2	100	88.430	Macaca_mulatta
ENSMICG00000000039	TDP2	100	87.459	ENSMNEG00000038003	TDP2	100	88.430	Macaca_nemestrina
ENSMICG00000000039	TDP2	100	87.459	ENSMLEG00000028883	TDP2	99	88.451	Mandrillus_leucophaeus
ENSMICG00000000039	TDP2	95	55.124	ENSMAMG00000013654	tdp2b	94	53.869	Mastacembelus_armatus
ENSMICG00000000039	TDP2	89	54.887	ENSMZEG00005004077	tdp2b	90	54.887	Maylandia_zebra
ENSMICG00000000039	TDP2	84	47.581	ENSMZEG00005003980	-	85	46.415	Maylandia_zebra
ENSMICG00000000039	TDP2	89	47.925	ENSMZEG00005004103	tdp2b	88	48.106	Maylandia_zebra
ENSMICG00000000039	TDP2	94	51.064	ENSMZEG00005004153	tdp2b	99	51.064	Maylandia_zebra
ENSMICG00000000039	TDP2	85	51.587	ENSMZEG00005004055	tdp2b	92	48.929	Maylandia_zebra
ENSMICG00000000039	TDP2	98	48.639	ENSMZEG00005004126	tdp2b	99	47.099	Maylandia_zebra
ENSMICG00000000039	TDP2	96	52.514	ENSMZEG00005003950	tdp2b	99	52.514	Maylandia_zebra
ENSMICG00000000039	TDP2	95	71.326	ENSMGAG00000008014	TDP2	96	64.706	Meleagris_gallopavo
ENSMICG00000000039	TDP2	94	73.022	ENSMAUG00000014451	Tdp2	93	67.435	Mesocricetus_auratus
ENSMICG00000000039	TDP2	94	75.180	ENSMOCG00000002823	Tdp2	95	69.296	Microtus_ochrogaster
ENSMICG00000000039	TDP2	82	73.859	ENSMODG00000011653	TDP2	98	67.284	Monodelphis_domestica
ENSMICG00000000039	TDP2	97	47.811	ENSMALG00000005368	-	97	47.811	Monopterus_albus
ENSMICG00000000039	TDP2	94	74.460	MGP_CAROLIEiJ_G0018354	Tdp2	97	66.116	Mus_caroli
ENSMICG00000000039	TDP2	94	74.820	ENSMUSG00000035958	Tdp2	94	68.182	Mus_musculus
ENSMICG00000000039	TDP2	94	73.022	MGP_PahariEiJ_G0019417	Tdp2	96	64.167	Mus_pahari
ENSMICG00000000039	TDP2	94	74.460	MGP_SPRETEiJ_G0019220	Tdp2	93	67.898	Mus_spretus
ENSMICG00000000039	TDP2	94	88.489	ENSMPUG00000004516	TDP2	99	83.427	Mustela_putorius_furo
ENSMICG00000000039	TDP2	95	81.071	ENSMLUG00000013506	TDP2	97	74.571	Myotis_lucifugus
ENSMICG00000000039	TDP2	94	69.675	ENSNGAG00000001375	Tdp2	94	64.841	Nannospalax_galili
ENSMICG00000000039	TDP2	100	87.789	ENSNLEG00000002447	TDP2	100	88.705	Nomascus_leucogenys
ENSMICG00000000039	TDP2	95	88.571	ENSOPRG00000016299	TDP2	99	85.303	Ochotona_princeps
ENSMICG00000000039	TDP2	98	89.236	ENSODEG00000014018	TDP2	97	89.236	Octodon_degus
ENSMICG00000000039	TDP2	95	88.530	ENSOCUG00000013773	TDP2	96	85.879	Oryctolagus_cuniculus
ENSMICG00000000039	TDP2	88	48.106	ENSORLG00000001661	-	96	48.106	Oryzias_latipes
ENSMICG00000000039	TDP2	88	48.106	ENSORLG00020004634	-	96	48.106	Oryzias_latipes_hni
ENSMICG00000000039	TDP2	89	43.820	ENSORLG00015008190	-	97	43.820	Oryzias_latipes_hsok
ENSMICG00000000039	TDP2	94	46.043	ENSOMEG00000015899	-	92	49.597	Oryzias_melastigma
ENSMICG00000000039	TDP2	100	86.501	ENSOGAG00000025303	TDP2	99	86.501	Otolemur_garnettii
ENSMICG00000000039	TDP2	100	87.459	ENSPPAG00000029023	TDP2	100	88.981	Pan_paniscus
ENSMICG00000000039	TDP2	95	88.172	ENSPPRG00000015398	TDP2	98	86.119	Panthera_pardus
ENSMICG00000000039	TDP2	100	85.235	ENSPTIG00000018574	TDP2	99	85.235	Panthera_tigris_altaica
ENSMICG00000000039	TDP2	100	88.119	ENSPTRG00000017778	TDP2	100	88.981	Pan_troglodytes
ENSMICG00000000039	TDP2	100	87.129	ENSPANG00000017590	TDP2	100	87.879	Papio_anubis
ENSMICG00000000039	TDP2	94	55.674	ENSPKIG00000006483	tdp2b	94	53.468	Paramormyrops_kingsleyae
ENSMICG00000000039	TDP2	94	71.942	ENSPSIG00000004948	TDP2	100	69.863	Pelodiscus_sinensis
ENSMICG00000000039	TDP2	94	75.180	ENSPEMG00000001788	Tdp2	94	69.516	Peromyscus_maniculatus_bairdii
ENSMICG00000000039	TDP2	85	45.693	ENSPMAG00000001570	tdp2b	97	46.067	Petromyzon_marinus
ENSMICG00000000039	TDP2	95	72.401	ENSPCIG00000007316	TDP2	92	66.289	Phascolarctos_cinereus
ENSMICG00000000039	TDP2	84	50.400	ENSPFOG00000017990	-	90	50.400	Poecilia_formosa
ENSMICG00000000039	TDP2	84	50.000	ENSPLAG00000019439	-	79	50.000	Poecilia_latipinna
ENSMICG00000000039	TDP2	89	48.872	ENSPMEG00000010824	-	94	46.875	Poecilia_mexicana
ENSMICG00000000039	TDP2	94	89.568	ENSPPYG00000016282	TDP2	92	87.879	Pongo_abelii
ENSMICG00000000039	TDP2	100	94.215	ENSPCOG00000021415	TDP2	100	95.317	Propithecus_coquereli
ENSMICG00000000039	TDP2	96	52.514	ENSPNYG00000011532	tdp2b	99	52.514	Pundamilia_nyererei
ENSMICG00000000039	TDP2	61	49.444	ENSPNYG00000001944	-	72	50.867	Pundamilia_nyererei
ENSMICG00000000039	TDP2	89	49.822	ENSPNYG00000011504	tdp2b	91	50.000	Pundamilia_nyererei
ENSMICG00000000039	TDP2	83	52.245	ENSPNAG00000022162	tdp2a	63	52.033	Pygocentrus_nattereri
ENSMICG00000000039	TDP2	94	73.381	ENSRNOG00000018246	Tdp2	95	67.143	Rattus_norvegicus
ENSMICG00000000039	TDP2	100	87.129	ENSRBIG00000037119	TDP2	100	88.154	Rhinopithecus_bieti
ENSMICG00000000039	TDP2	100	86.799	ENSRROG00000005025	TDP2	99	86.799	Rhinopithecus_roxellana
ENSMICG00000000039	TDP2	100	88.430	ENSSBOG00000028734	TDP2	99	87.043	Saimiri_boliviensis_boliviensis
ENSMICG00000000039	TDP2	95	72.760	ENSSHAG00000002506	TDP2	97	66.482	Sarcophilus_harrisii
ENSMICG00000000039	TDP2	86	53.937	ENSSFOG00015011322	-	73	53.125	Scleropages_formosus
ENSMICG00000000039	TDP2	94	78.853	ENSSARG00000013547	TDP2	100	78.853	Sorex_araneus
ENSMICG00000000039	TDP2	94	66.286	ENSSPUG00000008288	TDP2	95	66.286	Sphenodon_punctatus
ENSMICG00000000039	TDP2	95	89.643	ENSSSCG00000001092	TDP2	100	86.777	Sus_scrofa
ENSMICG00000000039	TDP2	88	67.816	ENSTGUG00000009035	TDP2	100	67.816	Taeniopygia_guttata
ENSMICG00000000039	TDP2	95	54.610	ENSTRUG00000014347	tdp2b	95	53.353	Takifugu_rubripes
ENSMICG00000000039	TDP2	88	52.045	ENSTRUG00000012218	-	93	52.045	Takifugu_rubripes
ENSMICG00000000039	TDP2	95	54.804	ENSTNIG00000017792	tdp2b	95	51.841	Tetraodon_nigroviridis
ENSMICG00000000039	TDP2	87	53.462	ENSTNIG00000010260	TDP2	98	53.462	Tetraodon_nigroviridis
ENSMICG00000000039	TDP2	95	88.889	ENSTTRG00000016376	TDP2	100	85.399	Tursiops_truncatus
ENSMICG00000000039	TDP2	94	88.129	ENSUAMG00000025939	TDP2	97	81.503	Ursus_americanus
ENSMICG00000000039	TDP2	100	83.278	ENSUMAG00000020111	TDP2	99	83.278	Ursus_maritimus
ENSMICG00000000039	TDP2	95	68.440	ENSXETG00000014826	tdp2	99	62.264	Xenopus_tropicalis
ENSMICG00000000039	TDP2	84	50.996	ENSXCOG00000010778	-	69	50.996	Xiphophorus_couchianus
ENSMICG00000000039	TDP2	84	50.996	ENSXMAG00000022252	-	72	50.996	Xiphophorus_maculatus