EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000000140 (Gene tree)
Gene ID: 105884853
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 87144 bases
Position: chr11:22347917-22435060
Accession: 105884853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000016651	Xpo1	PF08389.12	2e-28	1	1
ENSMICP00000000127	Xpo1	PF08389.12	2.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000049386	TNPO3-201	4761	XM_012789181	ENSMICP00000016651	923 (aa)	XP_012644635	UPI00005A2B3F
ENSMICT00000000141	TNPO3-202	2580	-	ENSMICP00000000127	859 (aa)	-	UPI0001B79349

Gene Model

Click here to download ENSMICG00000000140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000000140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000000140	TNPO3	68	35.659	ENSMICG00000011003	IPO13	77	33.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000000140	TNPO3	100	100.000	ENSG00000064419	TNPO3	100	100.000	Homo_sapiens
ENSMICG00000000140	TNPO3	100	86.566	ENSAPOG00000018347	tnpo3	100	86.566	Acanthochromis_polyacanthus
ENSMICG00000000140	TNPO3	99	96.429	ENSAMEG00000005135	TNPO3	98	96.429	Ailuropoda_melanoleuca
ENSMICG00000000140	TNPO3	96	84.145	ENSACIG00000005897	tnpo3	99	84.145	Amphilophus_citrinellus
ENSMICG00000000140	TNPO3	100	86.674	ENSAOCG00000008264	tnpo3	100	86.674	Amphiprion_ocellaris
ENSMICG00000000140	TNPO3	96	86.636	ENSAPEG00000024300	tnpo3	100	86.636	Amphiprion_percula
ENSMICG00000000140	TNPO3	100	85.590	ENSATEG00000003197	tnpo3	100	85.590	Anabas_testudineus
ENSMICG00000000140	TNPO3	72	94.340	ENSAPLG00000005946	TNPO3	91	94.340	Anas_platyrhynchos
ENSMICG00000000140	TNPO3	82	92.773	ENSACAG00000013470	TNPO3	95	92.773	Anolis_carolinensis
ENSMICG00000000140	TNPO3	100	99.767	ENSANAG00000037940	TNPO3	100	99.767	Aotus_nancymaae
ENSMICG00000000140	TNPO3	100	85.915	ENSACLG00000005561	tnpo3	100	85.915	Astatotilapia_calliptera
ENSMICG00000000140	TNPO3	100	86.241	ENSAMXG00000016236	tnpo3	100	86.241	Astyanax_mexicanus
ENSMICG00000000140	TNPO3	100	99.242	ENSBTAG00000004992	TNPO3	100	99.242	Bos_taurus
ENSMICG00000000140	TNPO3	84	31.754	WBGene00006647	tsr-1	82	30.675	Caenorhabditis_elegans
ENSMICG00000000140	TNPO3	100	99.767	ENSCJAG00000018085	TNPO3	100	99.767	Callithrix_jacchus
ENSMICG00000000140	TNPO3	100	100.000	ENSCAFG00000001543	TNPO3	100	100.000	Canis_familiaris
ENSMICG00000000140	TNPO3	100	100.000	ENSCAFG00020022462	TNPO3	99	99.568	Canis_lupus_dingo
ENSMICG00000000140	TNPO3	100	99.242	ENSCHIG00000011721	TNPO3	100	99.242	Capra_hircus
ENSMICG00000000140	TNPO3	100	99.884	ENSTSYG00000002989	TNPO3	100	99.884	Carlito_syrichta
ENSMICG00000000140	TNPO3	70	97.849	ENSCAPG00000005843	TNPO3	91	97.849	Cavia_aperea
ENSMICG00000000140	TNPO3	100	99.350	ENSCPOG00000039784	TNPO3	100	99.350	Cavia_porcellus
ENSMICG00000000140	TNPO3	100	99.884	ENSCCAG00000033826	TNPO3	100	99.884	Cebus_capucinus
ENSMICG00000000140	TNPO3	100	100.000	ENSCATG00000030018	TNPO3	100	100.000	Cercocebus_atys
ENSMICG00000000140	TNPO3	100	98.813	ENSCLAG00000016298	TNPO3	100	98.813	Chinchilla_lanigera
ENSMICG00000000140	TNPO3	100	99.783	ENSCSAG00000009966	TNPO3	100	99.783	Chlorocebus_sabaeus
ENSMICG00000000140	TNPO3	99	71.083	ENSCHOG00000011547	TNPO3	99	71.083	Choloepus_hoffmanni
ENSMICG00000000140	TNPO3	93	94.866	ENSCPBG00000017497	TNPO3	100	94.866	Chrysemys_picta_bellii
ENSMICG00000000140	TNPO3	99	48.911	ENSCING00000005042	-	99	48.911	Ciona_intestinalis
ENSMICG00000000140	TNPO3	99	47.219	ENSCSAVG00000008623	-	94	54.182	Ciona_savignyi
ENSMICG00000000140	TNPO3	100	100.000	ENSCANG00000033070	TNPO3	100	100.000	Colobus_angolensis_palliatus
ENSMICG00000000140	TNPO3	100	99.567	ENSCGRG00001015925	Tnpo3	100	99.567	Cricetulus_griseus_chok1gshd
ENSMICG00000000140	TNPO3	100	99.567	ENSCGRG00000010379	Tnpo3	100	99.567	Cricetulus_griseus_crigri
ENSMICG00000000140	TNPO3	100	84.940	ENSCSEG00000005952	tnpo3	100	84.940	Cynoglossus_semilaevis
ENSMICG00000000140	TNPO3	100	85.699	ENSCVAG00000020285	tnpo3	100	85.699	Cyprinodon_variegatus
ENSMICG00000000140	TNPO3	100	86.083	ENSDARG00000045680	tnpo3	100	85.807	Danio_rerio
ENSMICG00000000140	TNPO3	100	99.892	ENSDNOG00000002556	TNPO3	100	99.892	Dasypus_novemcinctus
ENSMICG00000000140	TNPO3	62	97.582	ENSDORG00000002433	Tnpo3	95	97.582	Dipodomys_ordii
ENSMICG00000000140	TNPO3	99	42.582	FBgn0031456	Tnpo-SR	99	42.519	Drosophila_melanogaster
ENSMICG00000000140	TNPO3	95	99.560	ENSETEG00000002101	TNPO3	90	99.560	Echinops_telfairi
ENSMICG00000000140	TNPO3	100	74.722	ENSEBUG00000016931	tnpo3	100	71.289	Eptatretus_burgeri
ENSMICG00000000140	TNPO3	100	99.783	ENSEASG00005008677	TNPO3	100	99.783	Equus_asinus_asinus
ENSMICG00000000140	TNPO3	100	99.783	ENSECAG00000012815	TNPO3	100	99.783	Equus_caballus
ENSMICG00000000140	TNPO3	61	32.701	ENSEEUG00000011681	IPO13	73	30.493	Erinaceus_europaeus
ENSMICG00000000140	TNPO3	99	99.718	ENSEEUG00000005178	TNPO3	98	93.723	Erinaceus_europaeus
ENSMICG00000000140	TNPO3	99	86.942	ENSELUG00000012153	tnpo3	99	86.942	Esox_lucius
ENSMICG00000000140	TNPO3	100	100.000	ENSFCAG00000018186	TNPO3	100	100.000	Felis_catus
ENSMICG00000000140	TNPO3	96	89.632	ENSFALG00000010667	TNPO3	100	89.632	Ficedula_albicollis
ENSMICG00000000140	TNPO3	100	99.243	ENSFDAG00000019578	TNPO3	100	99.243	Fukomys_damarensis
ENSMICG00000000140	TNPO3	100	85.699	ENSFHEG00000012859	tnpo3	100	85.699	Fundulus_heteroclitus
ENSMICG00000000140	TNPO3	100	85.590	ENSGMOG00000007324	tnpo3	100	85.590	Gadus_morhua
ENSMICG00000000140	TNPO3	61	94.306	ENSGALG00000039420	TNPO3	98	94.306	Gallus_gallus
ENSMICG00000000140	TNPO3	100	85.807	ENSGACG00000000699	tnpo3	100	85.807	Gasterosteus_aculeatus
ENSMICG00000000140	TNPO3	93	94.749	ENSGAGG00000006777	TNPO3	100	94.749	Gopherus_agassizii
ENSMICG00000000140	TNPO3	100	100.000	ENSGGOG00000008339	TNPO3	100	100.000	Gorilla_gorilla
ENSMICG00000000140	TNPO3	100	85.915	ENSHBUG00000008351	tnpo3	100	85.915	Haplochromis_burtoni
ENSMICG00000000140	TNPO3	100	99.783	ENSHGLG00000004463	TNPO3	100	99.783	Heterocephalus_glaber_female
ENSMICG00000000140	TNPO3	100	99.783	ENSHGLG00100005509	TNPO3	100	99.783	Heterocephalus_glaber_male
ENSMICG00000000140	TNPO3	100	85.265	ENSHCOG00000007221	tnpo3	100	85.265	Hippocampus_comes
ENSMICG00000000140	TNPO3	100	85.833	ENSIPUG00000014979	TNPO3	99	85.157	Ictalurus_punctatus
ENSMICG00000000140	TNPO3	100	99.892	ENSSTOG00000004885	TNPO3	100	99.892	Ictidomys_tridecemlineatus
ENSMICG00000000140	TNPO3	100	92.449	ENSJJAG00000013530	Tnpo3	100	92.449	Jaculus_jaculus
ENSMICG00000000140	TNPO3	100	85.915	ENSKMAG00000010497	tnpo3	100	85.915	Kryptolebias_marmoratus
ENSMICG00000000140	TNPO3	95	86.667	ENSLBEG00000016595	tnpo3	100	84.371	Labrus_bergylta
ENSMICG00000000140	TNPO3	96	81.767	ENSLBEG00000011988	-	99	81.767	Labrus_bergylta
ENSMICG00000000140	TNPO3	84	90.270	ENSLACG00000002351	TNPO3	99	90.270	Latimeria_chalumnae
ENSMICG00000000140	TNPO3	100	87.757	ENSLOCG00000015556	tnpo3	100	87.757	Lepisosteus_oculatus
ENSMICG00000000140	TNPO3	100	99.245	ENSLAFG00000002738	TNPO3	100	99.245	Loxodonta_africana
ENSMICG00000000140	TNPO3	100	100.000	ENSMFAG00000032385	TNPO3	100	100.000	Macaca_fascicularis
ENSMICG00000000140	TNPO3	100	100.000	ENSMMUG00000004311	TNPO3	100	100.000	Macaca_mulatta
ENSMICG00000000140	TNPO3	100	100.000	ENSMNEG00000045277	TNPO3	100	100.000	Macaca_nemestrina
ENSMICG00000000140	TNPO3	100	100.000	ENSMLEG00000037881	TNPO3	100	100.000	Mandrillus_leucophaeus
ENSMICG00000000140	TNPO3	100	86.241	ENSMAMG00000021096	tnpo3	100	86.241	Mastacembelus_armatus
ENSMICG00000000140	TNPO3	100	85.915	ENSMZEG00005015084	tnpo3	100	85.915	Maylandia_zebra
ENSMICG00000000140	TNPO3	78	89.241	ENSMGAG00000002839	TNPO3	99	89.241	Meleagris_gallopavo
ENSMICG00000000140	TNPO3	100	99.458	ENSMAUG00000013463	Tnpo3	100	99.458	Mesocricetus_auratus
ENSMICG00000000140	TNPO3	100	99.567	ENSMOCG00000013264	Tnpo3	100	99.567	Microtus_ochrogaster
ENSMICG00000000140	TNPO3	100	85.374	ENSMMOG00000005887	tnpo3	100	85.374	Mola_mola
ENSMICG00000000140	TNPO3	100	97.725	ENSMODG00000014700	TNPO3	100	97.725	Monodelphis_domestica
ENSMICG00000000140	TNPO3	100	86.083	ENSMALG00000006675	tnpo3	100	85.699	Monopterus_albus
ENSMICG00000000140	TNPO3	100	99.458	MGP_CAROLIEiJ_G0028176	Tnpo3	100	99.458	Mus_caroli
ENSMICG00000000140	TNPO3	100	99.458	ENSMUSG00000012535	Tnpo3	100	99.458	Mus_musculus
ENSMICG00000000140	TNPO3	100	99.350	MGP_PahariEiJ_G0021934	Tnpo3	100	99.350	Mus_pahari
ENSMICG00000000140	TNPO3	100	99.350	MGP_SPRETEiJ_G0029176	Tnpo3	100	99.350	Mus_spretus
ENSMICG00000000140	TNPO3	100	100.000	ENSMPUG00000006021	TNPO3	100	100.000	Mustela_putorius_furo
ENSMICG00000000140	TNPO3	100	89.382	ENSMLUG00000000947	TNPO3	100	89.382	Myotis_lucifugus
ENSMICG00000000140	TNPO3	100	99.892	ENSNGAG00000008722	Tnpo3	100	99.892	Nannospalax_galili
ENSMICG00000000140	TNPO3	100	85.089	ENSNBRG00000019001	tnpo3	100	85.569	Neolamprologus_brichardi
ENSMICG00000000140	TNPO3	100	99.884	ENSNLEG00000012491	TNPO3	100	99.884	Nomascus_leucogenys
ENSMICG00000000140	TNPO3	92	80.858	ENSMEUG00000002445	TNPO3	91	80.858	Notamacropus_eugenii
ENSMICG00000000140	TNPO3	91	99.457	ENSOPRG00000006163	TNPO3	90	99.457	Ochotona_princeps
ENSMICG00000000140	TNPO3	98	99.335	ENSODEG00000012826	TNPO3	100	99.335	Octodon_degus
ENSMICG00000000140	TNPO3	100	86.132	ENSONIG00000007604	tnpo3	100	86.132	Oreochromis_niloticus
ENSMICG00000000140	TNPO3	95	93.268	ENSOANG00000011451	TNPO3	100	93.268	Ornithorhynchus_anatinus
ENSMICG00000000140	TNPO3	99	96.008	ENSOCUG00000010105	TNPO3	99	96.008	Oryctolagus_cuniculus
ENSMICG00000000140	TNPO3	100	85.000	ENSORLG00000029369	tnpo3	100	84.832	Oryzias_latipes
ENSMICG00000000140	TNPO3	100	85.000	ENSORLG00020003464	tnpo3	100	84.832	Oryzias_latipes_hni
ENSMICG00000000140	TNPO3	100	85.278	ENSORLG00015002610	tnpo3	100	84.940	Oryzias_latipes_hsok
ENSMICG00000000140	TNPO3	100	85.278	ENSOMEG00000021006	tnpo3	100	85.049	Oryzias_melastigma
ENSMICG00000000140	TNPO3	100	99.783	ENSOGAG00000015340	TNPO3	100	99.783	Otolemur_garnettii
ENSMICG00000000140	TNPO3	100	99.025	ENSOARG00000004026	TNPO3	100	99.025	Ovis_aries
ENSMICG00000000140	TNPO3	100	100.000	ENSPPAG00000034975	TNPO3	100	100.000	Pan_paniscus
ENSMICG00000000140	TNPO3	100	100.000	ENSPPRG00000002050	TNPO3	100	100.000	Panthera_pardus
ENSMICG00000000140	TNPO3	100	100.000	ENSPTIG00000016167	TNPO3	100	100.000	Panthera_tigris_altaica
ENSMICG00000000140	TNPO3	100	100.000	ENSPTRG00000019676	TNPO3	100	100.000	Pan_troglodytes
ENSMICG00000000140	TNPO3	100	100.000	ENSPANG00000022226	TNPO3	100	100.000	Papio_anubis
ENSMICG00000000140	TNPO3	100	80.670	ENSPKIG00000008628	-	100	80.670	Paramormyrops_kingsleyae
ENSMICG00000000140	TNPO3	100	83.889	ENSPKIG00000023234	tnpo3	100	83.749	Paramormyrops_kingsleyae
ENSMICG00000000140	TNPO3	62	79.577	ENSPMGG00000009763	tnpo3	99	79.577	Periophthalmus_magnuspinnatus
ENSMICG00000000140	TNPO3	100	99.458	ENSPEMG00000000422	Tnpo3	100	99.458	Peromyscus_maniculatus_bairdii
ENSMICG00000000140	TNPO3	95	75.000	ENSPMAG00000008621	tnpo3	100	72.933	Petromyzon_marinus
ENSMICG00000000140	TNPO3	100	97.183	ENSPCIG00000011366	TNPO3	100	97.183	Phascolarctos_cinereus
ENSMICG00000000140	TNPO3	100	85.885	ENSPFOG00000013592	tnpo3	99	85.590	Poecilia_formosa
ENSMICG00000000140	TNPO3	100	85.885	ENSPLAG00000010188	tnpo3	100	85.590	Poecilia_latipinna
ENSMICG00000000140	TNPO3	100	85.885	ENSPMEG00000022731	tnpo3	100	85.699	Poecilia_mexicana
ENSMICG00000000140	TNPO3	100	99.892	ENSPPYG00000017990	TNPO3	100	99.892	Pongo_abelii
ENSMICG00000000140	TNPO3	99	92.113	ENSPCAG00000010158	TNPO3	98	88.667	Procavia_capensis
ENSMICG00000000140	TNPO3	88	100.000	ENSPCOG00000023901	TNPO3	97	100.000	Propithecus_coquereli
ENSMICG00000000140	TNPO3	96	99.691	ENSPVAG00000015757	TNPO3	98	92.857	Pteropus_vampyrus
ENSMICG00000000140	TNPO3	100	85.915	ENSPNYG00000002349	tnpo3	100	85.915	Pundamilia_nyererei
ENSMICG00000000140	TNPO3	100	86.999	ENSPNAG00000001142	tnpo3	100	86.999	Pygocentrus_nattereri
ENSMICG00000000140	TNPO3	100	99.350	ENSRNOG00000021758	Tnpo3	100	99.350	Rattus_norvegicus
ENSMICG00000000140	TNPO3	100	99.884	ENSRBIG00000042549	TNPO3	100	99.884	Rhinopithecus_bieti
ENSMICG00000000140	TNPO3	100	99.884	ENSRROG00000039264	TNPO3	100	99.884	Rhinopithecus_roxellana
ENSMICG00000000140	TNPO3	100	82.189	ENSSBOG00000029642	TNPO3	100	82.189	Saimiri_boliviensis_boliviensis
ENSMICG00000000140	TNPO3	96	97.961	ENSSHAG00000006837	TNPO3	100	97.961	Sarcophilus_harrisii
ENSMICG00000000140	TNPO3	100	83.101	ENSSFOG00015004256	tnpo3	100	80.983	Scleropages_formosus
ENSMICG00000000140	TNPO3	100	85.000	ENSSFOG00015001474	tnpo3	100	84.832	Scleropages_formosus
ENSMICG00000000140	TNPO3	100	86.241	ENSSMAG00000010422	tnpo3	97	86.241	Scophthalmus_maximus
ENSMICG00000000140	TNPO3	100	86.674	ENSSDUG00000004850	tnpo3	100	86.674	Seriola_dumerili
ENSMICG00000000140	TNPO3	100	86.674	ENSSLDG00000016927	tnpo3	100	86.674	Seriola_lalandi_dorsalis
ENSMICG00000000140	TNPO3	95	86.359	ENSSARG00000013893	TNPO3	98	86.359	Sorex_araneus
ENSMICG00000000140	TNPO3	99	87.771	ENSSPUG00000007457	TNPO3	99	87.689	Sphenodon_punctatus
ENSMICG00000000140	TNPO3	79	87.603	ENSSPAG00000014209	tnpo3	99	87.603	Stegastes_partitus
ENSMICG00000000140	TNPO3	100	99.892	ENSSSCG00000016572	TNPO3	100	100.000	Sus_scrofa
ENSMICG00000000140	TNPO3	100	84.125	ENSTNIG00000003347	tnpo3	100	84.125	Tetraodon_nigroviridis
ENSMICG00000000140	TNPO3	94	100.000	ENSTBEG00000007220	TNPO3	90	100.000	Tupaia_belangeri
ENSMICG00000000140	TNPO3	99	84.769	ENSTTRG00000014618	TNPO3	98	84.769	Tursiops_truncatus
ENSMICG00000000140	TNPO3	100	100.000	ENSUAMG00000021281	TNPO3	100	100.000	Ursus_americanus
ENSMICG00000000140	TNPO3	100	100.000	ENSUMAG00000006882	TNPO3	100	100.000	Ursus_maritimus
ENSMICG00000000140	TNPO3	80	93.827	ENSVPAG00000006166	TNPO3	88	84.629	Vicugna_pacos
ENSMICG00000000140	TNPO3	100	100.000	ENSVVUG00000011004	TNPO3	100	100.000	Vulpes_vulpes
ENSMICG00000000140	TNPO3	100	82.937	ENSXETG00000015009	tnpo3	100	82.937	Xenopus_tropicalis
ENSMICG00000000140	TNPO3	100	85.374	ENSXMAG00000013062	tnpo3	100	85.374	Xiphophorus_maculatus