EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000000757 (Gene tree)
Gene ID: 105876612
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 67815 bases
Position: chr4:30401863-30469677
Accession: 105876612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000036809	RNA_pol_Rpb1_5	PF04998.17	7.2e-104	1	1
ENSMICP00000036809	RNA_pol_Rpb1_4	PF05000.17	1.1e-25	1	1
ENSMICP00000036809	RNA_pol_Rpb1_2	PF00623.20	1.6e-69	1	1
ENSMICP00000036809	RNA_pol_Rpb1_3	PF04983.18	2.7e-37	1	1
ENSMICP00000036809	RNA_pol_Rpb1_1	PF04997.12	6.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000029205	POLR1A-201	6371	XM_012774311	ENSMICP00000036809	1721 (aa)	XP_012629765	UPI00064352BE

Gene Model

Click here to download ENSMICG00000000757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000000757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000000757	POLR1A	71	32.727	ENSMICG00000013372	-	75	33.193
ENSMICG00000000757	POLR1A	60	34.746	ENSMICG00000005937	POLR3A	81	34.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000000757	POLR1A	97	95.385	ENSG00000068654	POLR1A	100	92.388	Homo_sapiens
ENSMICG00000000757	POLR1A	69	68.013	ENSAPOG00000017945	polr1a	99	68.013	Acanthochromis_polyacanthus
ENSMICG00000000757	POLR1A	100	90.703	ENSAMEG00000005807	POLR1A	100	92.213	Ailuropoda_melanoleuca
ENSMICG00000000757	POLR1A	96	67.010	ENSACIG00000022147	polr1a	100	66.758	Amphilophus_citrinellus
ENSMICG00000000757	POLR1A	100	66.108	ENSAOCG00000017336	polr1a	100	67.785	Amphiprion_ocellaris
ENSMICG00000000757	POLR1A	100	66.050	ENSAPEG00000016105	polr1a	100	65.668	Amphiprion_percula
ENSMICG00000000757	POLR1A	100	66.107	ENSATEG00000016773	polr1a	100	66.127	Anabas_testudineus
ENSMICG00000000757	POLR1A	86	72.309	ENSAPLG00000013871	POLR1A	99	72.241	Anas_platyrhynchos
ENSMICG00000000757	POLR1A	99	69.417	ENSACAG00000012141	POLR1A	99	69.009	Anolis_carolinensis
ENSMICG00000000757	POLR1A	100	91.226	ENSANAG00000033927	POLR1A	100	91.400	Aotus_nancymaae
ENSMICG00000000757	POLR1A	100	62.167	ENSACLG00000020541	polr1a	100	61.987	Astatotilapia_calliptera
ENSMICG00000000757	POLR1A	100	90.122	ENSBTAG00000006481	POLR1A	100	90.413	Bos_taurus
ENSMICG00000000757	POLR1A	99	38.436	WBGene00012999	rpoa-1	98	38.410	Caenorhabditis_elegans
ENSMICG00000000757	POLR1A	100	91.110	ENSCJAG00000019547	POLR1A	100	91.400	Callithrix_jacchus
ENSMICG00000000757	POLR1A	100	91.517	ENSCAFG00000007613	POLR1A	100	91.575	Canis_familiaris
ENSMICG00000000757	POLR1A	100	91.309	ENSCAFG00020014752	POLR1A	100	91.367	Canis_lupus_dingo
ENSMICG00000000757	POLR1A	100	87.956	ENSCHIG00000018204	POLR1A	99	89.385	Capra_hircus
ENSMICG00000000757	POLR1A	100	89.367	ENSTSYG00000002761	POLR1A	100	89.309	Carlito_syrichta
ENSMICG00000000757	POLR1A	97	84.207	ENSCAPG00000010132	POLR1A	100	84.119	Cavia_aperea
ENSMICG00000000757	POLR1A	100	88.741	ENSCPOG00000012350	POLR1A	100	88.857	Cavia_porcellus
ENSMICG00000000757	POLR1A	100	91.575	ENSCCAG00000019839	POLR1A	100	91.865	Cebus_capucinus
ENSMICG00000000757	POLR1A	100	92.504	ENSCATG00000029786	POLR1A	100	92.795	Cercocebus_atys
ENSMICG00000000757	POLR1A	100	89.050	ENSCLAG00000005187	POLR1A	100	89.166	Chinchilla_lanigera
ENSMICG00000000757	POLR1A	100	92.504	ENSCSAG00000016251	POLR1A	100	92.795	Chlorocebus_sabaeus
ENSMICG00000000757	POLR1A	99	74.681	ENSCPBG00000001115	POLR1A	99	74.375	Chrysemys_picta_bellii
ENSMICG00000000757	POLR1A	91	55.019	ENSCSAVG00000007184	-	91	55.019	Ciona_savignyi
ENSMICG00000000757	POLR1A	100	89.489	ENSCANG00000031785	POLR1A	100	89.779	Colobus_angolensis_palliatus
ENSMICG00000000757	POLR1A	100	83.391	ENSCGRG00001006651	Polr1a	100	83.507	Cricetulus_griseus_chok1gshd
ENSMICG00000000757	POLR1A	60	86.957	ENSCGRG00000010834	Polr1a	100	87.150	Cricetulus_griseus_crigri
ENSMICG00000000757	POLR1A	100	61.877	ENSCSEG00000020190	polr1a	100	61.819	Cynoglossus_semilaevis
ENSMICG00000000757	POLR1A	100	64.286	ENSCVAG00000020941	polr1a	100	64.553	Cyprinodon_variegatus
ENSMICG00000000757	POLR1A	100	67.572	ENSDARG00000098375	polr1a	100	67.071	Danio_rerio
ENSMICG00000000757	POLR1A	100	82.812	ENSDNOG00000010829	POLR1A	100	82.755	Dasypus_novemcinctus
ENSMICG00000000757	POLR1A	100	88.439	ENSDORG00000008298	Polr1a	100	88.497	Dipodomys_ordii
ENSMICG00000000757	POLR1A	79	44.938	FBgn0019938	RpI1	99	43.056	Drosophila_melanogaster
ENSMICG00000000757	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSMICG00000000757	POLR1A	81	65.116	ENSEBUG00000005667	-	99	48.127	Eptatretus_burgeri
ENSMICG00000000757	POLR1A	100	92.272	ENSEASG00005001625	POLR1A	100	92.272	Equus_asinus_asinus
ENSMICG00000000757	POLR1A	100	92.272	ENSECAG00000036306	-	100	94.075	Equus_caballus
ENSMICG00000000757	POLR1A	100	92.272	ENSECAG00000010092	POLR1A	100	94.075	Equus_caballus
ENSMICG00000000757	POLR1A	100	92.272	ENSECAG00000030510	-	100	94.075	Equus_caballus
ENSMICG00000000757	POLR1A	85	95.745	ENSEEUG00000000676	POLR1A	85	95.556	Erinaceus_europaeus
ENSMICG00000000757	POLR1A	100	67.517	ENSELUG00000012769	polr1a	99	67.517	Esox_lucius
ENSMICG00000000757	POLR1A	100	91.807	ENSFCAG00000008966	POLR1A	100	91.923	Felis_catus
ENSMICG00000000757	POLR1A	99	70.775	ENSFALG00000010082	POLR1A	99	70.550	Ficedula_albicollis
ENSMICG00000000757	POLR1A	100	88.805	ENSFDAG00000013726	POLR1A	100	88.689	Fukomys_damarensis
ENSMICG00000000757	POLR1A	100	61.743	ENSFHEG00000005996	polr1a	100	61.858	Fundulus_heteroclitus
ENSMICG00000000757	POLR1A	100	60.279	ENSGMOG00000002230	polr1a	100	60.418	Gadus_morhua
ENSMICG00000000757	POLR1A	90	69.384	ENSGALG00000038160	-	99	69.320	Gallus_gallus
ENSMICG00000000757	POLR1A	100	64.447	ENSGAFG00000015266	polr1a	100	64.175	Gambusia_affinis
ENSMICG00000000757	POLR1A	100	64.566	ENSGACG00000018791	polr1a	100	64.360	Gasterosteus_aculeatus
ENSMICG00000000757	POLR1A	89	75.469	ENSGAGG00000004984	-	96	80.784	Gopherus_agassizii
ENSMICG00000000757	POLR1A	100	92.156	ENSGGOG00000001788	POLR1A	100	92.446	Gorilla_gorilla
ENSMICG00000000757	POLR1A	90	64.734	ENSHBUG00000020021	polr1a	99	64.593	Haplochromis_burtoni
ENSMICG00000000757	POLR1A	100	88.915	ENSHGLG00000006334	POLR1A	100	89.031	Heterocephalus_glaber_female
ENSMICG00000000757	POLR1A	100	88.657	ENSHGLG00100006614	POLR1A	100	88.773	Heterocephalus_glaber_male
ENSMICG00000000757	POLR1A	100	62.248	ENSHCOG00000003345	polr1a	100	61.984	Hippocampus_comes
ENSMICG00000000757	POLR1A	100	66.609	ENSIPUG00000013174	polr1a	100	66.089	Ictalurus_punctatus
ENSMICG00000000757	POLR1A	100	86.999	ENSSTOG00000012580	POLR1A	100	87.348	Ictidomys_tridecemlineatus
ENSMICG00000000757	POLR1A	100	88.239	ENSJJAG00000013113	Polr1a	100	88.065	Jaculus_jaculus
ENSMICG00000000757	POLR1A	100	65.215	ENSKMAG00000007399	polr1a	100	64.910	Kryptolebias_marmoratus
ENSMICG00000000757	POLR1A	95	68.439	ENSLBEG00000015401	polr1a	99	67.986	Labrus_bergylta
ENSMICG00000000757	POLR1A	53	76.931	ENSLACG00000003218	polr1a	100	76.931	Latimeria_chalumnae
ENSMICG00000000757	POLR1A	100	70.497	ENSLOCG00000010881	polr1a	100	70.629	Lepisosteus_oculatus
ENSMICG00000000757	POLR1A	100	89.474	ENSLAFG00000014948	POLR1A	100	89.589	Loxodonta_africana
ENSMICG00000000757	POLR1A	100	92.562	ENSMFAG00000046097	POLR1A	100	92.853	Macaca_fascicularis
ENSMICG00000000757	POLR1A	100	92.446	ENSMMUG00000015815	POLR1A	100	92.737	Macaca_mulatta
ENSMICG00000000757	POLR1A	100	92.504	ENSMNEG00000043313	POLR1A	100	92.795	Macaca_nemestrina
ENSMICG00000000757	POLR1A	100	91.749	ENSMLEG00000042428	POLR1A	100	92.040	Mandrillus_leucophaeus
ENSMICG00000000757	POLR1A	100	65.531	ENSMAMG00000016565	polr1a	100	65.913	Mastacembelus_armatus
ENSMICG00000000757	POLR1A	100	65.585	ENSMZEG00005004915	polr1a	100	65.396	Maylandia_zebra
ENSMICG00000000757	POLR1A	99	68.696	ENSMGAG00000013111	POLR1A	99	68.638	Meleagris_gallopavo
ENSMICG00000000757	POLR1A	92	88.258	ENSMAUG00000008497	Polr1a	100	88.321	Mesocricetus_auratus
ENSMICG00000000757	POLR1A	100	88.310	ENSMOCG00000000122	Polr1a	100	88.252	Microtus_ochrogaster
ENSMICG00000000757	POLR1A	100	65.313	ENSMMOG00000010216	polr1a	100	65.371	Mola_mola
ENSMICG00000000757	POLR1A	100	75.231	ENSMODG00000009335	POLR1A	100	75.289	Monodelphis_domestica
ENSMICG00000000757	POLR1A	100	65.643	ENSMALG00000013363	polr1a	100	65.152	Monopterus_albus
ENSMICG00000000757	POLR1A	100	86.574	MGP_CAROLIEiJ_G0028494	Polr1a	100	86.458	Mus_caroli
ENSMICG00000000757	POLR1A	100	86.690	ENSMUSG00000049553	Polr1a	100	86.574	Mus_musculus
ENSMICG00000000757	POLR1A	100	86.748	MGP_PahariEiJ_G0022230	Polr1a	100	86.632	Mus_pahari
ENSMICG00000000757	POLR1A	100	85.202	MGP_SPRETEiJ_G0029499	Polr1a	100	85.568	Mus_spretus
ENSMICG00000000757	POLR1A	100	91.168	ENSMPUG00000009135	POLR1A	100	91.284	Mustela_putorius_furo
ENSMICG00000000757	POLR1A	100	89.017	ENSMLUG00000015723	POLR1A	100	89.191	Myotis_lucifugus
ENSMICG00000000757	POLR1A	100	87.796	ENSNGAG00000017907	Polr1a	100	87.854	Nannospalax_galili
ENSMICG00000000757	POLR1A	100	65.469	ENSNBRG00000000519	polr1a	100	65.453	Neolamprologus_brichardi
ENSMICG00000000757	POLR1A	100	90.226	ENSNLEG00000002264	POLR1A	100	90.515	Nomascus_leucogenys
ENSMICG00000000757	POLR1A	75	92.126	ENSMEUG00000011665	-	75	92.126	Notamacropus_eugenii
ENSMICG00000000757	POLR1A	99	83.108	ENSOPRG00000008269	POLR1A	100	83.108	Ochotona_princeps
ENSMICG00000000757	POLR1A	100	88.805	ENSODEG00000003542	POLR1A	100	88.921	Octodon_degus
ENSMICG00000000757	POLR1A	100	65.953	ENSONIG00000015895	polr1a	100	66.010	Oreochromis_niloticus
ENSMICG00000000757	POLR1A	100	91.173	ENSOCUG00000010138	POLR1A	100	91.463	Oryctolagus_cuniculus
ENSMICG00000000757	POLR1A	100	64.658	ENSORLG00000008753	polr1a	99	64.401	Oryzias_latipes
ENSMICG00000000757	POLR1A	100	63.600	ENSORLG00020020726	polr1a	99	63.349	Oryzias_latipes_hni
ENSMICG00000000757	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSMICG00000000757	POLR1A	100	92.795	ENSOGAG00000004031	POLR1A	100	92.969	Otolemur_garnettii
ENSMICG00000000757	POLR1A	100	89.437	ENSOARG00000020601	POLR1A	100	89.727	Ovis_aries
ENSMICG00000000757	POLR1A	100	91.923	ENSPPAG00000042450	POLR1A	100	92.214	Pan_paniscus
ENSMICG00000000757	POLR1A	100	91.749	ENSPPRG00000006702	POLR1A	100	91.865	Panthera_pardus
ENSMICG00000000757	POLR1A	100	91.199	ENSPTIG00000018783	POLR1A	100	91.314	Panthera_tigris_altaica
ENSMICG00000000757	POLR1A	100	91.865	ENSPTRG00000012147	POLR1A	100	92.156	Pan_troglodytes
ENSMICG00000000757	POLR1A	100	92.388	ENSPANG00000025908	POLR1A	100	92.679	Papio_anubis
ENSMICG00000000757	POLR1A	94	76.389	ENSPKIG00000005468	polr1a	99	76.389	Paramormyrops_kingsleyae
ENSMICG00000000757	POLR1A	63	71.232	ENSPSIG00000009321	-	99	70.540	Pelodiscus_sinensis
ENSMICG00000000757	POLR1A	54	68.663	ENSPMGG00000009718	polr1a	95	68.663	Periophthalmus_magnuspinnatus
ENSMICG00000000757	POLR1A	100	88.252	ENSPEMG00000022224	Polr1a	100	88.600	Peromyscus_maniculatus_bairdii
ENSMICG00000000757	POLR1A	95	79.260	ENSPCIG00000004222	POLR1A	99	79.200	Phascolarctos_cinereus
ENSMICG00000000757	POLR1A	100	64.910	ENSPFOG00000005025	polr1a	100	64.195	Poecilia_formosa
ENSMICG00000000757	POLR1A	100	65.159	ENSPLAG00000021389	polr1a	100	64.409	Poecilia_latipinna
ENSMICG00000000757	POLR1A	100	63.289	ENSPMEG00000006463	polr1a	100	63.331	Poecilia_mexicana
ENSMICG00000000757	POLR1A	100	64.794	ENSPREG00000002389	polr1a	100	64.679	Poecilia_reticulata
ENSMICG00000000757	POLR1A	100	91.575	ENSPPYG00000012217	POLR1A	100	91.865	Pongo_abelii
ENSMICG00000000757	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	92	100.000	Procavia_capensis
ENSMICG00000000757	POLR1A	100	97.095	ENSPCOG00000026987	POLR1A	100	97.095	Propithecus_coquereli
ENSMICG00000000757	POLR1A	95	90.809	ENSPVAG00000012674	POLR1A	95	90.459	Pteropus_vampyrus
ENSMICG00000000757	POLR1A	100	65.585	ENSPNYG00000000026	polr1a	100	65.396	Pundamilia_nyererei
ENSMICG00000000757	POLR1A	100	67.727	ENSPNAG00000019223	polr1a	100	66.878	Pygocentrus_nattereri
ENSMICG00000000757	POLR1A	100	87.674	ENSRNOG00000009545	Polr1a	100	88.137	Rattus_norvegicus
ENSMICG00000000757	POLR1A	100	91.749	ENSRBIG00000028335	POLR1A	100	92.040	Rhinopithecus_bieti
ENSMICG00000000757	POLR1A	100	91.691	ENSRROG00000031473	POLR1A	100	91.981	Rhinopithecus_roxellana
ENSMICG00000000757	POLR1A	99	37.037	YOR341W	RPA190	99	36.695	Saccharomyces_cerevisiae
ENSMICG00000000757	POLR1A	100	91.168	ENSSBOG00000030262	POLR1A	100	91.168	Saimiri_boliviensis_boliviensis
ENSMICG00000000757	POLR1A	100	73.890	ENSSHAG00000014739	POLR1A	100	73.890	Sarcophilus_harrisii
ENSMICG00000000757	POLR1A	100	67.474	ENSSFOG00015019716	polr1a	100	67.205	Scleropages_formosus
ENSMICG00000000757	POLR1A	100	65.913	ENSSMAG00000014342	polr1a	100	65.665	Scophthalmus_maximus
ENSMICG00000000757	POLR1A	100	66.416	ENSSDUG00000014631	polr1a	100	66.186	Seriola_dumerili
ENSMICG00000000757	POLR1A	100	64.641	ENSSLDG00000024095	polr1a	100	64.418	Seriola_lalandi_dorsalis
ENSMICG00000000757	POLR1A	75	95.745	ENSSARG00000003136	-	76	95.745	Sorex_araneus
ENSMICG00000000757	POLR1A	94	77.949	ENSSPUG00000004215	POLR1A	98	77.949	Sphenodon_punctatus
ENSMICG00000000757	POLR1A	63	71.769	ENSSPAG00000016341	polr1a	94	71.769	Stegastes_partitus
ENSMICG00000000757	POLR1A	83	90.826	ENSSSCG00000008226	POLR1A	99	90.801	Sus_scrofa
ENSMICG00000000757	POLR1A	99	69.724	ENSTGUG00000010704	POLR1A	100	69.397	Taeniopygia_guttata
ENSMICG00000000757	POLR1A	100	63.841	ENSTRUG00000002210	polr1a	97	65.231	Takifugu_rubripes
ENSMICG00000000757	POLR1A	100	60.104	ENSTNIG00000010116	polr1a	100	59.931	Tetraodon_nigroviridis
ENSMICG00000000757	POLR1A	74	96.903	ENSTBEG00000008646	POLR1A	74	96.903	Tupaia_belangeri
ENSMICG00000000757	POLR1A	100	85.997	ENSTTRG00000008597	POLR1A	100	86.113	Tursiops_truncatus
ENSMICG00000000757	POLR1A	69	91.385	ENSUAMG00000012158	-	94	91.554	Ursus_americanus
ENSMICG00000000757	POLR1A	100	90.413	ENSUMAG00000006700	POLR1A	100	90.529	Ursus_maritimus
ENSMICG00000000757	POLR1A	100	91.342	ENSVVUG00000001245	POLR1A	100	91.342	Vulpes_vulpes
ENSMICG00000000757	POLR1A	100	67.972	ENSXETG00000001952	polr1a	100	69.274	Xenopus_tropicalis
ENSMICG00000000757	POLR1A	100	65.046	ENSXMAG00000004032	polr1a	100	64.679	Xiphophorus_maculatus