EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000000793 (Gene tree)
Gene ID: 105885489
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 12363 bases
Position: chr24:3372136-3384498
Accession: 105885489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000000718	zf-CCCH	PF00642.24	1.1e-06	1	1
ENSMICP00000017289	zf-CCCH	PF00642.24	1.1e-06	1	1
ENSMICP00000000718	TRM	PF02005.16	1.2e-149	1	1
ENSMICP00000017289	TRM	PF02005.16	1.2e-149	1	1
ENSMICP00000042501	TRM	PF02005.16	1.5e-149	1	1
ENSMICP00000000718	Met_10	PF02475.16	1.6e-06	1	1
ENSMICP00000017289	Met_10	PF02475.16	1.6e-06	1	1
ENSMICP00000042501	Met_10	PF02475.16	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000042732	TRMT1-203	2483	XM_012790410	ENSMICP00000017289	662 (aa)	XP_012645864	UPI000642D18B
ENSMICT00000000799	TRMT1-202	6682	XM_012790411	ENSMICP00000000718	662 (aa)	XP_012645865	UPI000642D18B
ENSMICT00000065139	TRMT1-201	6840	-	ENSMICP00000042501	713 (aa)	-	UPI000C2ED171

Gene Model

Click here to download ENSMICG00000000793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000000793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000000793	TRMT1	97	91.888	ENSG00000104907	TRMT1	100	97.382	Homo_sapiens
ENSMICG00000000793	TRMT1	100	87.915	ENSAMEG00000012598	TRMT1	99	87.915	Ailuropoda_melanoleuca
ENSMICG00000000793	TRMT1	86	59.930	ENSACIG00000018680	trmt1	88	59.930	Amphilophus_citrinellus
ENSMICG00000000793	TRMT1	87	66.551	ENSAOCG00000006781	trmt1	86	66.551	Amphiprion_ocellaris
ENSMICG00000000793	TRMT1	87	66.609	ENSAPEG00000007712	trmt1	86	66.609	Amphiprion_percula
ENSMICG00000000793	TRMT1	87	67.944	ENSATEG00000001872	trmt1	84	67.944	Anabas_testudineus
ENSMICG00000000793	TRMT1	87	68.458	ENSACAG00000003825	TRMT1	93	68.458	Anolis_carolinensis
ENSMICG00000000793	TRMT1	98	86.482	ENSANAG00000023016	TRMT1	99	88.979	Aotus_nancymaae
ENSMICG00000000793	TRMT1	86	64.974	ENSACLG00000010073	trmt1	92	64.974	Astatotilapia_calliptera
ENSMICG00000000793	TRMT1	87	68.339	ENSAMXG00000012026	trmt1	85	68.339	Astyanax_mexicanus
ENSMICG00000000793	TRMT1	100	86.707	ENSBTAG00000019325	TRMT1	94	86.707	Bos_taurus
ENSMICG00000000793	TRMT1	80	40.959	WBGene00006613	trm-1	96	40.959	Caenorhabditis_elegans
ENSMICG00000000793	TRMT1	98	86.133	ENSCJAG00000004566	TRMT1	99	86.133	Callithrix_jacchus
ENSMICG00000000793	TRMT1	100	88.218	ENSCAFG00000017070	TRMT1	99	88.994	Canis_familiaris
ENSMICG00000000793	TRMT1	99	87.289	ENSCAFG00020005397	TRMT1	100	84.441	Canis_lupus_dingo
ENSMICG00000000793	TRMT1	100	86.878	ENSCHIG00000013569	TRMT1	100	86.878	Capra_hircus
ENSMICG00000000793	TRMT1	97	85.226	ENSTSYG00000003207	TRMT1	99	85.366	Carlito_syrichta
ENSMICG00000000793	TRMT1	85	81.673	ENSCAPG00000003355	TRMT1	98	81.673	Cavia_aperea
ENSMICG00000000793	TRMT1	99	83.333	ENSCPOG00000011754	TRMT1	99	83.333	Cavia_porcellus
ENSMICG00000000793	TRMT1	98	84.356	ENSCCAG00000022263	TRMT1	99	87.338	Cebus_capucinus
ENSMICG00000000793	TRMT1	87	74.745	ENSCATG00000038220	-	99	74.745	Cercocebus_atys
ENSMICG00000000793	TRMT1	100	91.390	ENSCATG00000039850	TRMT1	100	91.390	Cercocebus_atys
ENSMICG00000000793	TRMT1	98	86.903	ENSCLAG00000015295	TRMT1	96	86.903	Chinchilla_lanigera
ENSMICG00000000793	TRMT1	80	92.264	ENSCSAG00000006500	TRMT1	100	92.264	Chlorocebus_sabaeus
ENSMICG00000000793	TRMT1	93	68.293	ENSCPBG00000023866	TRMT1	90	68.730	Chrysemys_picta_bellii
ENSMICG00000000793	TRMT1	82	45.922	ENSCING00000002884	-	97	45.922	Ciona_intestinalis
ENSMICG00000000793	TRMT1	83	46.377	ENSCSAVG00000010927	-	99	46.283	Ciona_savignyi
ENSMICG00000000793	TRMT1	98	74.924	ENSCANG00000040631	TRMT1	99	74.924	Colobus_angolensis_palliatus
ENSMICG00000000793	TRMT1	95	70.382	ENSCANG00000031650	-	98	70.827	Colobus_angolensis_palliatus
ENSMICG00000000793	TRMT1	100	82.733	ENSCGRG00001022594	Trmt1	100	82.733	Cricetulus_griseus_chok1gshd
ENSMICG00000000793	TRMT1	100	82.733	ENSCGRG00000017732	Trmt1	100	82.733	Cricetulus_griseus_crigri
ENSMICG00000000793	TRMT1	86	66.783	ENSCSEG00000001643	trmt1	84	68.482	Cynoglossus_semilaevis
ENSMICG00000000793	TRMT1	86	67.951	ENSCVAG00000011886	trmt1	85	67.951	Cyprinodon_variegatus
ENSMICG00000000793	TRMT1	86	66.724	ENSDARG00000010978	trmt1	85	66.724	Danio_rerio
ENSMICG00000000793	TRMT1	84	62.500	ENSDNOG00000048240	-	95	62.500	Dasypus_novemcinctus
ENSMICG00000000793	TRMT1	99	84.251	ENSDORG00000014298	Trmt1	99	84.251	Dipodomys_ordii
ENSMICG00000000793	TRMT1	77	48.649	FBgn0032430	CG6388	87	48.649	Drosophila_melanogaster
ENSMICG00000000793	TRMT1	54	83.158	ENSETEG00000015483	-	54	83.158	Echinops_telfairi
ENSMICG00000000793	TRMT1	77	53.606	ENSEBUG00000003449	trmt1	74	53.682	Eptatretus_burgeri
ENSMICG00000000793	TRMT1	94	87.801	ENSEASG00005004050	TRMT1	99	87.736	Equus_asinus_asinus
ENSMICG00000000793	TRMT1	94	88.122	ENSECAG00000016149	TRMT1	99	88.050	Equus_caballus
ENSMICG00000000793	TRMT1	60	72.040	ENSEEUG00000014102	-	100	72.040	Erinaceus_europaeus
ENSMICG00000000793	TRMT1	86	65.803	ENSELUG00000021659	trmt1	85	65.803	Esox_lucius
ENSMICG00000000793	TRMT1	99	88.073	ENSFCAG00000000483	TRMT1	99	88.073	Felis_catus
ENSMICG00000000793	TRMT1	99	84.290	ENSFDAG00000007386	TRMT1	99	84.290	Fukomys_damarensis
ENSMICG00000000793	TRMT1	88	65.636	ENSFHEG00000012865	trmt1	89	69.331	Fundulus_heteroclitus
ENSMICG00000000793	TRMT1	87	61.082	ENSGMOG00000006564	trmt1	98	61.606	Gadus_morhua
ENSMICG00000000793	TRMT1	88	67.581	ENSGAFG00000011862	trmt1	89	68.096	Gambusia_affinis
ENSMICG00000000793	TRMT1	88	63.095	ENSGACG00000000227	trmt1	94	63.283	Gasterosteus_aculeatus
ENSMICG00000000793	TRMT1	92	67.700	ENSGAGG00000016432	TRMT1	89	67.700	Gopherus_agassizii
ENSMICG00000000793	TRMT1	97	92.044	ENSGGOG00000014007	TRMT1	99	92.049	Gorilla_gorilla
ENSMICG00000000793	TRMT1	89	57.119	ENSHBUG00000008821	trmt1	97	57.119	Haplochromis_burtoni
ENSMICG00000000793	TRMT1	99	85.562	ENSHGLG00000015972	TRMT1	99	85.562	Heterocephalus_glaber_female
ENSMICG00000000793	TRMT1	99	79.818	ENSHGLG00100018112	TRMT1	99	79.818	Heterocephalus_glaber_male
ENSMICG00000000793	TRMT1	87	64.049	ENSHCOG00000009447	trmt1	88	64.049	Hippocampus_comes
ENSMICG00000000793	TRMT1	88	65.494	ENSIPUG00000002899	trmt1	86	65.546	Ictalurus_punctatus
ENSMICG00000000793	TRMT1	100	88.084	ENSSTOG00000012531	TRMT1	100	88.084	Ictidomys_tridecemlineatus
ENSMICG00000000793	TRMT1	95	84.102	ENSJJAG00000017154	Trmt1	100	82.078	Jaculus_jaculus
ENSMICG00000000793	TRMT1	90	66.223	ENSKMAG00000011809	trmt1	96	66.044	Kryptolebias_marmoratus
ENSMICG00000000793	TRMT1	86	67.133	ENSLBEG00000012703	trmt1	84	67.133	Labrus_bergylta
ENSMICG00000000793	TRMT1	89	57.071	ENSLACG00000014585	TRMT1	94	57.071	Latimeria_chalumnae
ENSMICG00000000793	TRMT1	86	63.918	ENSLOCG00000006479	trmt1	97	63.918	Lepisosteus_oculatus
ENSMICG00000000793	TRMT1	95	89.715	ENSLAFG00000014072	TRMT1	97	89.715	Loxodonta_africana
ENSMICG00000000793	TRMT1	100	91.541	ENSMFAG00000033143	TRMT1	100	91.541	Macaca_fascicularis
ENSMICG00000000793	TRMT1	99	85.213	ENSMMUG00000001167	TRMT1	99	85.213	Macaca_mulatta
ENSMICG00000000793	TRMT1	100	91.541	ENSMNEG00000037867	TRMT1	100	91.541	Macaca_nemestrina
ENSMICG00000000793	TRMT1	99	91.131	ENSMLEG00000016142	TRMT1	99	91.131	Mandrillus_leucophaeus
ENSMICG00000000793	TRMT1	91	66.113	ENSMAMG00000004357	trmt1	89	66.113	Mastacembelus_armatus
ENSMICG00000000793	TRMT1	86	65.324	ENSMZEG00005014510	trmt1	85	65.324	Maylandia_zebra
ENSMICG00000000793	TRMT1	98	83.538	ENSMAUG00000011134	Trmt1	100	82.733	Mesocricetus_auratus
ENSMICG00000000793	TRMT1	98	83.796	ENSMOCG00000015895	Trmt1	100	82.883	Microtus_ochrogaster
ENSMICG00000000793	TRMT1	86	66.725	ENSMMOG00000011097	trmt1	92	66.725	Mola_mola
ENSMICG00000000793	TRMT1	91	76.898	ENSMODG00000011619	TRMT1	97	76.898	Monodelphis_domestica
ENSMICG00000000793	TRMT1	100	83.033	MGP_CAROLIEiJ_G0031304	Trmt1	100	83.033	Mus_caroli
ENSMICG00000000793	TRMT1	100	82.883	ENSMUSG00000001909	Trmt1	100	82.883	Mus_musculus
ENSMICG00000000793	TRMT1	100	82.883	MGP_SPRETEiJ_G0032422	Trmt1	100	82.883	Mus_spretus
ENSMICG00000000793	TRMT1	100	87.613	ENSMPUG00000004210	TRMT1	95	87.613	Mustela_putorius_furo
ENSMICG00000000793	TRMT1	100	87.915	ENSMLUG00000012809	TRMT1	99	87.915	Myotis_lucifugus
ENSMICG00000000793	TRMT1	100	82.309	ENSNGAG00000022486	Trmt1	100	82.309	Nannospalax_galili
ENSMICG00000000793	TRMT1	75	69.851	ENSNBRG00000024376	trmt1	85	69.851	Neolamprologus_brichardi
ENSMICG00000000793	TRMT1	78	90.991	ENSNLEG00000013019	-	99	89.941	Nomascus_leucogenys
ENSMICG00000000793	TRMT1	90	76.897	ENSMEUG00000013756	TRMT1	99	76.897	Notamacropus_eugenii
ENSMICG00000000793	TRMT1	82	87.640	ENSOPRG00000009471	-	82	87.640	Ochotona_princeps
ENSMICG00000000793	TRMT1	99	85.627	ENSODEG00000010323	TRMT1	99	85.627	Octodon_degus
ENSMICG00000000793	TRMT1	93	64.583	ENSONIG00000000400	trmt1	99	64.583	Oreochromis_niloticus
ENSMICG00000000793	TRMT1	79	89.524	ENSOCUG00000021934	TRMT1	99	89.524	Oryctolagus_cuniculus
ENSMICG00000000793	TRMT1	86	63.621	ENSORLG00000020074	trmt1	90	63.621	Oryzias_latipes
ENSMICG00000000793	TRMT1	86	66.492	ENSORLG00020007561	trmt1	89	66.318	Oryzias_latipes_hni
ENSMICG00000000793	TRMT1	86	66.667	ENSORLG00015006547	trmt1	86	66.667	Oryzias_latipes_hsok
ENSMICG00000000793	TRMT1	86	66.783	ENSOMEG00000019343	trmt1	86	66.783	Oryzias_melastigma
ENSMICG00000000793	TRMT1	95	89.082	ENSOGAG00000025576	TRMT1	99	89.241	Otolemur_garnettii
ENSMICG00000000793	TRMT1	100	71.171	ENSOARG00000009397	TRMT1	94	71.471	Ovis_aries
ENSMICG00000000793	TRMT1	98	80.154	ENSPPRG00000012117	TRMT1	100	80.154	Panthera_pardus
ENSMICG00000000793	TRMT1	77	89.666	ENSPTIG00000008833	TRMT1	97	89.666	Panthera_tigris_altaica
ENSMICG00000000793	TRMT1	97	91.888	ENSPTRG00000010557	TRMT1	99	91.896	Pan_troglodytes
ENSMICG00000000793	TRMT1	98	69.432	ENSPTRG00000050421	-	99	69.432	Pan_troglodytes
ENSMICG00000000793	TRMT1	99	91.629	ENSPANG00000009247	TRMT1	99	91.629	Papio_anubis
ENSMICG00000000793	TRMT1	85	76.360	ENSPANG00000034058	-	96	76.360	Papio_anubis
ENSMICG00000000793	TRMT1	87	68.641	ENSPKIG00000005309	trmt1	84	68.641	Paramormyrops_kingsleyae
ENSMICG00000000793	TRMT1	86	59.895	ENSPSIG00000008762	TRMT1	81	59.895	Pelodiscus_sinensis
ENSMICG00000000793	TRMT1	91	64.404	ENSPMGG00000019764	trmt1	95	64.570	Periophthalmus_magnuspinnatus
ENSMICG00000000793	TRMT1	98	85.913	ENSPEMG00000016247	Trmt1	100	84.535	Peromyscus_maniculatus_bairdii
ENSMICG00000000793	TRMT1	86	60.664	ENSPMAG00000004329	trmt1	89	60.664	Petromyzon_marinus
ENSMICG00000000793	TRMT1	95	74.331	ENSPCIG00000019273	TRMT1	98	74.331	Phascolarctos_cinereus
ENSMICG00000000793	TRMT1	88	68.954	ENSPFOG00000008527	trmt1	89	68.954	Poecilia_formosa
ENSMICG00000000793	TRMT1	88	68.611	ENSPLAG00000018788	trmt1	90	70.356	Poecilia_latipinna
ENSMICG00000000793	TRMT1	88	68.782	ENSPMEG00000013120	trmt1	89	68.782	Poecilia_mexicana
ENSMICG00000000793	TRMT1	88	67.410	ENSPREG00000000211	trmt1	86	67.925	Poecilia_reticulata
ENSMICG00000000793	TRMT1	97	92.200	ENSPPYG00000009622	TRMT1	99	92.202	Pongo_abelii
ENSMICG00000000793	TRMT1	98	80.184	ENSPCAG00000003698	TRMT1	99	80.184	Procavia_capensis
ENSMICG00000000793	TRMT1	99	96.483	ENSPCOG00000008653	TRMT1	99	96.483	Propithecus_coquereli
ENSMICG00000000793	TRMT1	99	88.991	ENSPVAG00000015076	TRMT1	99	88.991	Pteropus_vampyrus
ENSMICG00000000793	TRMT1	86	63.748	ENSPNYG00000013960	trmt1	92	63.748	Pundamilia_nyererei
ENSMICG00000000793	TRMT1	81	69.647	ENSPNAG00000024859	trmt1	88	69.647	Pygocentrus_nattereri
ENSMICG00000000793	TRMT1	96	84.219	ENSRNOG00000002914	Trmt1	99	84.219	Rattus_norvegicus
ENSMICG00000000793	TRMT1	100	91.088	ENSRBIG00000038324	TRMT1	100	91.088	Rhinopithecus_bieti
ENSMICG00000000793	TRMT1	95	70.840	ENSRBIG00000037505	-	99	71.184	Rhinopithecus_bieti
ENSMICG00000000793	TRMT1	95	70.270	ENSRROG00000031847	-	98	70.561	Rhinopithecus_roxellana
ENSMICG00000000793	TRMT1	100	90.937	ENSRROG00000028599	TRMT1	100	90.937	Rhinopithecus_roxellana
ENSMICG00000000793	TRMT1	77	37.058	YDR120C	-	92	37.058	Saccharomyces_cerevisiae
ENSMICG00000000793	TRMT1	98	85.736	ENSSBOG00000028861	TRMT1	99	87.825	Saimiri_boliviensis_boliviensis
ENSMICG00000000793	TRMT1	91	76.033	ENSSHAG00000014381	TRMT1	98	75.902	Sarcophilus_harrisii
ENSMICG00000000793	TRMT1	87	68.761	ENSSFOG00015004139	trmt1	84	68.761	Scleropages_formosus
ENSMICG00000000793	TRMT1	86	67.422	ENSSMAG00000021136	trmt1	85	67.422	Scophthalmus_maximus
ENSMICG00000000793	TRMT1	86	67.483	ENSSDUG00000012740	trmt1	84	67.483	Seriola_dumerili
ENSMICG00000000793	TRMT1	86	67.657	ENSSLDG00000005971	trmt1	84	67.657	Seriola_lalandi_dorsalis
ENSMICG00000000793	TRMT1	85	84.547	ENSSARG00000005138	TRMT1	99	84.547	Sorex_araneus
ENSMICG00000000793	TRMT1	87	54.655	ENSSPUG00000001084	TRMT1	88	59.387	Sphenodon_punctatus
ENSMICG00000000793	TRMT1	90	63.289	ENSSPAG00000007153	trmt1	94	64.818	Stegastes_partitus
ENSMICG00000000793	TRMT1	96	89.796	ENSSSCG00000013744	TRMT1	99	89.796	Sus_scrofa
ENSMICG00000000793	TRMT1	85	62.738	ENSTRUG00000010700	trmt1	86	62.912	Takifugu_rubripes
ENSMICG00000000793	TRMT1	86	66.492	ENSTNIG00000018808	trmt1	98	66.492	Tetraodon_nigroviridis
ENSMICG00000000793	TRMT1	98	85.913	ENSTTRG00000006379	TRMT1	99	85.933	Tursiops_truncatus
ENSMICG00000000793	TRMT1	98	88.172	ENSUAMG00000022911	TRMT1	99	88.172	Ursus_americanus
ENSMICG00000000793	TRMT1	96	88.365	ENSUMAG00000006027	TRMT1	99	88.365	Ursus_maritimus
ENSMICG00000000793	TRMT1	100	88.218	ENSVVUG00000024177	TRMT1	100	88.218	Vulpes_vulpes
ENSMICG00000000793	TRMT1	70	72.234	ENSXETG00000033863	TRMT1	92	72.234	Xenopus_tropicalis
ENSMICG00000000793	TRMT1	86	68.357	ENSXCOG00000015733	trmt1	88	68.881	Xiphophorus_couchianus
ENSMICG00000000793	TRMT1	87	67.826	ENSXMAG00000013823	trmt1	98	68.348	Xiphophorus_maculatus