EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000000837 (Gene tree)
Gene ID: 105866249
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 78449 bases
Position: chr23:27355908-27434356
Accession: 105866249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000041043	La	PF05383.17	8.9e-21	1	1
ENSMICP00000020261	La	PF05383.17	1.1e-20	1	1
ENSMICP00000031966	La	PF05383.17	1.2e-20	1	1
ENSMICP00000000754	La	PF05383.17	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000067538	LARP1-202	3314	-	ENSMICP00000041043	825 (aa)	-	UPI000C2ED5D2
ENSMICT00000000837	LARP1-203	2997	XM_012755473	ENSMICP00000000754	998 (aa)	XP_012610927	UPI000C2ED45A
ENSMICT00000044454	LARP1-204	2886	-	ENSMICP00000031966	961 (aa)	-	UPI000C2ED297
ENSMICT00000034842	LARP1-201	3521	XM_012755479	ENSMICP00000020261	894 (aa)	XP_012610933	UPI000C2E9F0D

Gene Model

Click here to download ENSMICG00000000837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000000837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000000837	LARP1	55	41.121	ENSMICG00000028052	-	99	41.760
ENSMICG00000000837	LARP1	98	62.415	ENSMICG00000036111	LARP1B	99	60.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000000837	LARP1	99	96.868	ENSG00000155506	LARP1	100	98.233	Homo_sapiens
ENSMICG00000000837	LARP1	84	82.301	ENSAPOG00000020685	larp1	86	84.977	Acanthochromis_polyacanthus
ENSMICG00000000837	LARP1	99	97.315	ENSAMEG00000016673	LARP1	100	95.634	Ailuropoda_melanoleuca
ENSMICG00000000837	LARP1	98	71.599	ENSACIG00000012994	larp1	81	73.720	Amphilophus_citrinellus
ENSMICG00000000837	LARP1	92	70.396	ENSAOCG00000007792	larp1	96	71.617	Amphiprion_ocellaris
ENSMICG00000000837	LARP1	98	70.201	ENSAPEG00000022246	larp1	87	67.432	Amphiprion_percula
ENSMICG00000000837	LARP1	95	70.794	ENSATEG00000013523	larp1	85	67.146	Anabas_testudineus
ENSMICG00000000837	LARP1	92	89.053	ENSAPLG00000007559	LARP1	99	83.987	Anas_platyrhynchos
ENSMICG00000000837	LARP1	99	83.748	ENSACAG00000004071	LARP1	100	79.022	Anolis_carolinensis
ENSMICG00000000837	LARP1	99	97.315	ENSANAG00000029949	LARP1	99	95.417	Aotus_nancymaae
ENSMICG00000000837	LARP1	98	69.647	ENSACLG00000015256	larp1	98	66.265	Astatotilapia_calliptera
ENSMICG00000000837	LARP1	95	73.333	ENSAMXG00000000859	larp1	85	70.550	Astyanax_mexicanus
ENSMICG00000000837	LARP1	99	96.644	ENSBTAG00000008443	LARP1	87	94.974	Bos_taurus
ENSMICG00000000837	LARP1	99	97.204	ENSCJAG00000004454	LARP1	99	92.731	Callithrix_jacchus
ENSMICG00000000837	LARP1	99	97.427	ENSCAFG00000017639	LARP1	100	95.916	Canis_familiaris
ENSMICG00000000837	LARP1	99	97.427	ENSCAFG00020023860	LARP1	99	97.427	Canis_lupus_dingo
ENSMICG00000000837	LARP1	99	95.973	ENSCHIG00000014414	LARP1	88	94.130	Capra_hircus
ENSMICG00000000837	LARP1	99	96.753	ENSTSYG00000013732	LARP1	99	93.187	Carlito_syrichta
ENSMICG00000000837	LARP1	92	94.915	ENSCAPG00000013865	LARP1	87	93.868	Cavia_aperea
ENSMICG00000000837	LARP1	99	97.315	ENSCPOG00000003377	LARP1	100	95.493	Cavia_porcellus
ENSMICG00000000837	LARP1	99	97.427	ENSCCAG00000025201	LARP1	99	92.731	Cebus_capucinus
ENSMICG00000000837	LARP1	99	96.980	ENSCATG00000030675	LARP1	99	92.633	Cercocebus_atys
ENSMICG00000000837	LARP1	99	96.980	ENSCLAG00000012755	LARP1	99	94.340	Chinchilla_lanigera
ENSMICG00000000837	LARP1	99	93.512	ENSCSAG00000010800	LARP1	100	93.512	Chlorocebus_sabaeus
ENSMICG00000000837	LARP1	92	91.837	ENSCHOG00000012716	LARP1	89	92.500	Choloepus_hoffmanni
ENSMICG00000000837	LARP1	99	81.465	ENSCPBG00000002173	LARP1	94	80.062	Chrysemys_picta_bellii
ENSMICG00000000837	LARP1	99	96.980	ENSCANG00000037418	LARP1	99	92.633	Colobus_angolensis_palliatus
ENSMICG00000000837	LARP1	99	96.193	ENSCGRG00001016913	Larp1	96	88.791	Cricetulus_griseus_chok1gshd
ENSMICG00000000837	LARP1	96	90.814	ENSCGRG00000009916	Larp1	99	91.385	Cricetulus_griseus_crigri
ENSMICG00000000837	LARP1	97	70.011	ENSCSEG00000016431	larp1	87	67.288	Cynoglossus_semilaevis
ENSMICG00000000837	LARP1	98	69.188	ENSCVAG00000022687	larp1	85	68.940	Cyprinodon_variegatus
ENSMICG00000000837	LARP1	98	68.295	ENSDARG00000101722	larp1	92	65.582	Danio_rerio
ENSMICG00000000837	LARP1	99	94.760	ENSDNOG00000012073	LARP1	87	93.319	Dasypus_novemcinctus
ENSMICG00000000837	LARP1	99	93.289	ENSDORG00000002897	Larp1	99	93.396	Dipodomys_ordii
ENSMICG00000000837	LARP1	92	96.610	ENSETEG00000020251	LARP1	100	95.795	Echinops_telfairi
ENSMICG00000000837	LARP1	99	97.092	ENSEASG00005001070	LARP1	87	95.602	Equus_asinus_asinus
ENSMICG00000000837	LARP1	99	97.092	ENSECAG00000017002	LARP1	69	95.602	Equus_caballus
ENSMICG00000000837	LARP1	99	90.958	ENSEEUG00000001065	LARP1	100	89.186	Erinaceus_europaeus
ENSMICG00000000837	LARP1	98	69.154	ENSELUG00000019403	larp1	91	64.956	Esox_lucius
ENSMICG00000000837	LARP1	99	97.204	ENSFCAG00000000592	LARP1	99	93.519	Felis_catus
ENSMICG00000000837	LARP1	90	85.447	ENSFALG00000008335	LARP1	99	81.451	Ficedula_albicollis
ENSMICG00000000837	LARP1	99	97.427	ENSFDAG00000021125	LARP1	100	95.702	Fukomys_damarensis
ENSMICG00000000837	LARP1	59	56.667	ENSFHEG00000020307	larp1	94	62.571	Fundulus_heteroclitus
ENSMICG00000000837	LARP1	99	82.497	ENSGALG00000040109	LARP1	95	78.810	Gallus_gallus
ENSMICG00000000837	LARP1	99	84.739	ENSGAGG00000025113	LARP1	99	79.674	Gopherus_agassizii
ENSMICG00000000837	LARP1	99	96.980	ENSGGOG00000006048	LARP1	99	92.436	Gorilla_gorilla
ENSMICG00000000837	LARP1	98	70.033	ENSHBUG00000020762	larp1	98	69.104	Haplochromis_burtoni
ENSMICG00000000837	LARP1	99	96.644	ENSHGLG00000006267	LARP1	87	94.380	Heterocephalus_glaber_female
ENSMICG00000000837	LARP1	99	78.903	ENSHGLG00100003395	-	87	79.681	Heterocephalus_glaber_male
ENSMICG00000000837	LARP1	99	96.756	ENSHGLG00100014230	-	100	95.283	Heterocephalus_glaber_male
ENSMICG00000000837	LARP1	90	79.294	ENSHCOG00000010786	larp1	85	79.294	Hippocampus_comes
ENSMICG00000000837	LARP1	96	67.783	ENSIPUG00000019105	Larp1	90	67.565	Ictalurus_punctatus
ENSMICG00000000837	LARP1	99	94.519	ENSSTOG00000005678	LARP1	99	94.549	Ictidomys_tridecemlineatus
ENSMICG00000000837	LARP1	99	90.482	ENSJJAG00000016950	Larp1	90	89.308	Jaculus_jaculus
ENSMICG00000000837	LARP1	95	71.231	ENSKMAG00000018468	larp1	95	67.531	Kryptolebias_marmoratus
ENSMICG00000000837	LARP1	98	70.635	ENSLBEG00000027172	larp1	85	67.553	Labrus_bergylta
ENSMICG00000000837	LARP1	92	76.784	ENSLOCG00000012457	larp1	91	75.000	Lepisosteus_oculatus
ENSMICG00000000837	LARP1	99	95.190	ENSLAFG00000008991	LARP1	89	93.613	Loxodonta_africana
ENSMICG00000000837	LARP1	99	96.532	ENSMFAG00000031651	LARP1	99	92.141	Macaca_fascicularis
ENSMICG00000000837	LARP1	99	92.953	ENSMMUG00000009411	LARP1	100	97.880	Macaca_mulatta
ENSMICG00000000837	LARP1	99	96.644	ENSMNEG00000039294	LARP1	99	96.644	Macaca_nemestrina
ENSMICG00000000837	LARP1	99	97.092	ENSMLEG00000035142	LARP1	99	92.731	Mandrillus_leucophaeus
ENSMICG00000000837	LARP1	99	71.541	ENSMAMG00000021788	larp1	89	66.269	Mastacembelus_armatus
ENSMICG00000000837	LARP1	98	69.647	ENSMZEG00005009345	larp1	98	66.265	Maylandia_zebra
ENSMICG00000000837	LARP1	99	81.078	ENSMGAG00000005696	LARP1	100	79.835	Meleagris_gallopavo
ENSMICG00000000837	LARP1	99	96.193	ENSMAUG00000001385	Larp1	89	94.444	Mesocricetus_auratus
ENSMICG00000000837	LARP1	99	96.193	ENSMOCG00000008920	Larp1	89	94.654	Microtus_ochrogaster
ENSMICG00000000837	LARP1	96	54.218	ENSMMOG00000013364	larp1	79	56.407	Mola_mola
ENSMICG00000000837	LARP1	99	87.015	ENSMODG00000008663	LARP1	99	82.432	Monodelphis_domestica
ENSMICG00000000837	LARP1	99	70.399	ENSMALG00000017180	larp1	93	70.671	Monopterus_albus
ENSMICG00000000837	LARP1	99	95.633	MGP_CAROLIEiJ_G0016383	Larp1	89	94.025	Mus_caroli
ENSMICG00000000837	LARP1	99	95.964	ENSMUSG00000037331	Larp1	89	94.130	Mus_musculus
ENSMICG00000000837	LARP1	99	96.193	MGP_PahariEiJ_G0017518	Larp1	89	94.444	Mus_pahari
ENSMICG00000000837	LARP1	99	95.964	MGP_SPRETEiJ_G0017225	Larp1	89	94.235	Mus_spretus
ENSMICG00000000837	LARP1	78	97.851	ENSMPUG00000013564	LARP1	84	96.842	Mustela_putorius_furo
ENSMICG00000000837	LARP1	99	92.601	ENSMLUG00000002608	LARP1	100	91.554	Myotis_lucifugus
ENSMICG00000000837	LARP1	99	91.489	ENSNGAG00000001098	Larp1	99	91.501	Nannospalax_galili
ENSMICG00000000837	LARP1	95	70.499	ENSNBRG00000008963	larp1	92	66.842	Neolamprologus_brichardi
ENSMICG00000000837	LARP1	99	93.624	ENSNLEG00000016588	LARP1	99	91.937	Nomascus_leucogenys
ENSMICG00000000837	LARP1	99	81.781	ENSMEUG00000002957	LARP1	100	76.285	Notamacropus_eugenii
ENSMICG00000000837	LARP1	99	96.197	ENSOPRG00000013014	LARP1	100	94.759	Ochotona_princeps
ENSMICG00000000837	LARP1	99	95.973	ENSODEG00000010824	LARP1	100	94.340	Octodon_degus
ENSMICG00000000837	LARP1	98	75.337	ENSONIG00000017308	larp1	89	68.168	Oreochromis_niloticus
ENSMICG00000000837	LARP1	99	86.818	ENSOANG00000005096	LARP1	98	82.268	Ornithorhynchus_anatinus
ENSMICG00000000837	LARP1	99	97.763	ENSOCUG00000013066	LARP1	89	96.258	Oryctolagus_cuniculus
ENSMICG00000000837	LARP1	95	69.781	ENSORLG00000000824	larp1	96	71.585	Oryzias_latipes
ENSMICG00000000837	LARP1	95	69.781	ENSORLG00020022241	larp1	85	67.762	Oryzias_latipes_hni
ENSMICG00000000837	LARP1	95	67.820	ENSORLG00015007538	larp1	85	67.663	Oryzias_latipes_hsok
ENSMICG00000000837	LARP1	95	67.935	ENSOMEG00000003134	larp1	86	67.412	Oryzias_melastigma
ENSMICG00000000837	LARP1	99	97.427	ENSOGAG00000016750	LARP1	100	95.807	Otolemur_garnettii
ENSMICG00000000837	LARP1	99	94.072	ENSOARG00000009893	LARP1	99	94.869	Ovis_aries
ENSMICG00000000837	LARP1	99	96.980	ENSPPAG00000042993	LARP1	99	92.534	Pan_paniscus
ENSMICG00000000837	LARP1	100	94.595	ENSPPRG00000009780	LARP1	99	93.287	Panthera_pardus
ENSMICG00000000837	LARP1	99	95.749	ENSPTIG00000007013	LARP1	99	92.330	Panthera_tigris_altaica
ENSMICG00000000837	LARP1	99	96.756	ENSPTRG00000017447	LARP1	99	92.338	Pan_troglodytes
ENSMICG00000000837	LARP1	99	96.980	ENSPANG00000008080	LARP1	99	92.534	Papio_anubis
ENSMICG00000000837	LARP1	97	67.503	ENSPKIG00000017153	-	89	64.795	Paramormyrops_kingsleyae
ENSMICG00000000837	LARP1	97	71.769	ENSPKIG00000010096	larp1	85	70.236	Paramormyrops_kingsleyae
ENSMICG00000000837	LARP1	93	69.420	ENSPMGG00000011599	larp1	91	67.241	Periophthalmus_magnuspinnatus
ENSMICG00000000837	LARP1	99	92.609	ENSPEMG00000022523	Larp1	99	92.670	Peromyscus_maniculatus_bairdii
ENSMICG00000000837	LARP1	99	85.055	ENSPCIG00000019242	LARP1	76	89.533	Phascolarctos_cinereus
ENSMICG00000000837	LARP1	95	70.468	ENSPFOG00000005836	larp1	85	67.430	Poecilia_formosa
ENSMICG00000000837	LARP1	95	70.239	ENSPLAG00000008936	larp1	84	68.365	Poecilia_latipinna
ENSMICG00000000837	LARP1	95	71.313	ENSPMEG00000013656	larp1	85	67.638	Poecilia_mexicana
ENSMICG00000000837	LARP1	95	70.968	ENSPREG00000005726	larp1	95	67.047	Poecilia_reticulata
ENSMICG00000000837	LARP1	99	91.163	ENSPCAG00000006407	LARP1	100	89.203	Procavia_capensis
ENSMICG00000000837	LARP1	99	89.374	ENSPCOG00000016949	LARP1	100	92.243	Propithecus_coquereli
ENSMICG00000000837	LARP1	99	96.536	ENSPVAG00000002262	LARP1	87	94.874	Pteropus_vampyrus
ENSMICG00000000837	LARP1	98	69.536	ENSPNYG00000007938	larp1	98	66.165	Pundamilia_nyererei
ENSMICG00000000837	LARP1	96	75.559	ENSPNAG00000021427	larp1	85	72.646	Pygocentrus_nattereri
ENSMICG00000000837	LARP1	99	92.721	ENSRNOG00000031544	Larp1	99	92.865	Rattus_norvegicus
ENSMICG00000000837	LARP1	99	96.868	ENSRBIG00000038005	LARP1	99	92.436	Rhinopithecus_bieti
ENSMICG00000000837	LARP1	99	96.868	ENSRROG00000034073	LARP1	99	96.868	Rhinopithecus_roxellana
ENSMICG00000000837	LARP1	99	97.315	ENSSBOG00000019816	LARP1	100	92.931	Saimiri_boliviensis_boliviensis
ENSMICG00000000837	LARP1	99	88.394	ENSSHAG00000011115	LARP1	100	83.264	Sarcophilus_harrisii
ENSMICG00000000837	LARP1	98	71.104	ENSSFOG00015018058	-	84	69.388	Scleropages_formosus
ENSMICG00000000837	LARP1	95	70.701	ENSSFOG00015020304	larp1	93	66.701	Scleropages_formosus
ENSMICG00000000837	LARP1	91	69.539	ENSSMAG00000007468	larp1	86	67.473	Scophthalmus_maximus
ENSMICG00000000837	LARP1	98	70.286	ENSSDUG00000000268	larp1	94	72.354	Seriola_dumerili
ENSMICG00000000837	LARP1	98	70.167	ENSSLDG00000016505	larp1	94	72.229	Seriola_lalandi_dorsalis
ENSMICG00000000837	LARP1	74	93.262	ENSSARG00000013907	-	89	94.172	Sorex_araneus
ENSMICG00000000837	LARP1	99	81.305	ENSSPUG00000012179	-	85	80.289	Sphenodon_punctatus
ENSMICG00000000837	LARP1	99	69.627	ENSSPAG00000003910	larp1	87	66.902	Stegastes_partitus
ENSMICG00000000837	LARP1	99	96.872	ENSSSCG00000017069	LARP1	99	96.872	Sus_scrofa
ENSMICG00000000837	LARP1	96	87.960	ENSTGUG00000000704	LARP1	100	82.699	Taeniopygia_guttata
ENSMICG00000000837	LARP1	99	68.632	ENSTRUG00000009470	larp1	88	65.314	Takifugu_rubripes
ENSMICG00000000837	LARP1	92	94.794	ENSTBEG00000003381	LARP1	100	94.350	Tupaia_belangeri
ENSMICG00000000837	LARP1	99	97.315	ENSTTRG00000015934	LARP1	100	95.597	Tursiops_truncatus
ENSMICG00000000837	LARP1	99	97.204	ENSUAMG00000019334	LARP1	87	95.707	Ursus_americanus
ENSMICG00000000837	LARP1	99	93.729	ENSUMAG00000002934	LARP1	99	94.093	Ursus_maritimus
ENSMICG00000000837	LARP1	99	97.427	ENSVVUG00000004644	LARP1	99	97.427	Vulpes_vulpes
ENSMICG00000000837	LARP1	99	77.248	ENSXETG00000008413	larp1	91	75.521	Xenopus_tropicalis
ENSMICG00000000837	LARP1	87	74.377	ENSXCOG00000004022	larp1	78	73.806	Xiphophorus_couchianus
ENSMICG00000000837	LARP1	95	70.968	ENSXMAG00000018780	larp1	85	67.118	Xiphophorus_maculatus