EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000000867 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 4074 bases
Position: chr15:38138513-38142586
Accession: 105870363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000000783	RRM_1	PF00076.22	5.8e-25	1	1
ENSMICP00000021204	RRM_1	PF00076.22	6e-25	1	1
ENSMICP00000022019	RRM_1	PF00076.22	4.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000037896	-	1860	XM_012762924	ENSMICP00000021204	619 (aa)	XP_012618378	UPI000C2EA162
ENSMICT00000000868	-	1827	-	ENSMICP00000000783	608 (aa)	-	UPI000C2ECD6A
ENSMICT00000047079	-	1116	-	ENSMICP00000022019	371 (aa)	-	UPI000C2EAB47

Gene Model

Click here to download ENSMICG00000000867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000000867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000000867	-	100	90.852	ENSMICG00000030551	-	100	93.765
ENSMICG00000000867	-	99	71.799	ENSMICG00000014121	CSTF2	99	71.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000000867	-	100	93.861	ENSG00000177613	CSTF2T	100	92.718	Homo_sapiens
ENSMICG00000000867	-	100	90.291	ENSAMEG00000015766	CSTF2T	100	87.342	Ailuropoda_melanoleuca
ENSMICG00000000867	-	82	94.719	ENSANAG00000027508	-	90	94.719	Aotus_nancymaae
ENSMICG00000000867	-	100	88.444	ENSBTAG00000018406	CSTF2T	100	85.494	Bos_taurus
ENSMICG00000000867	-	80	88.255	ENSCJAG00000039083	-	93	88.255	Callithrix_jacchus
ENSMICG00000000867	-	80	95.638	ENSCJAG00000011554	-	97	95.638	Callithrix_jacchus
ENSMICG00000000867	-	93	100.000	ENSCAFG00000015567	CSTF2T	99	96.429	Canis_familiaris
ENSMICG00000000867	-	80	72.807	ENSCAFG00020026426	CSTF2T	100	77.594	Canis_lupus_dingo
ENSMICG00000000867	-	100	87.676	ENSCHIG00000016590	CSTF2T	100	85.827	Capra_hircus
ENSMICG00000000867	-	100	93.538	ENSTSYG00000007750	CSTF2T	100	92.695	Carlito_syrichta
ENSMICG00000000867	-	100	90.252	ENSCPOG00000004195	CSTF2T	100	88.170	Cavia_porcellus
ENSMICG00000000867	-	82	95.380	ENSCCAG00000020816	-	89	95.380	Cebus_capucinus
ENSMICG00000000867	-	80	96.309	ENSCATG00000041868	-	95	96.309	Cercocebus_atys
ENSMICG00000000867	-	100	86.895	ENSCLAG00000017916	CSTF2T	100	88.144	Chinchilla_lanigera
ENSMICG00000000867	-	100	94.880	ENSCSAG00000018437	CSTF2T	100	94.551	Chlorocebus_sabaeus
ENSMICG00000000867	-	68	95.455	ENSCHOG00000011888	-	68	95.455	Choloepus_hoffmanni
ENSMICG00000000867	-	82	93.770	ENSCANG00000005843	-	99	90.852	Colobus_angolensis_palliatus
ENSMICG00000000867	-	100	86.470	ENSCGRG00001003222	Cstf2t	100	83.826	Cricetulus_griseus_chok1gshd
ENSMICG00000000867	-	100	87.850	ENSCGRG00000008682	Cstf2t	100	84.735	Cricetulus_griseus_crigri
ENSMICG00000000867	-	59	62.257	ENSCSEG00000002596	-	81	85.000	Cynoglossus_semilaevis
ENSMICG00000000867	-	100	90.145	ENSDNOG00000003283	CSTF2T	100	90.064	Dasypus_novemcinctus
ENSMICG00000000867	-	83	91.913	ENSDORG00000011245	Cstf2t	100	88.144	Dipodomys_ordii
ENSMICG00000000867	-	100	92.122	ENSEASG00005012929	CSTF2T	100	90.446	Equus_asinus_asinus
ENSMICG00000000867	-	100	91.547	ENSECAG00000004701	CSTF2T	100	89.474	Equus_caballus
ENSMICG00000000867	-	78	89.848	ENSELUG00000004079	-	77	89.119	Esox_lucius
ENSMICG00000000867	-	100	93.740	ENSFCAG00000046300	CSTF2T	100	90.690	Felis_catus
ENSMICG00000000867	-	100	85.736	ENSFDAG00000021170	CSTF2T	100	86.047	Fukomys_damarensis
ENSMICG00000000867	-	100	94.253	ENSGGOG00000042388	-	100	93.596	Gorilla_gorilla
ENSMICG00000000867	-	100	94.253	ENSGGOG00000036416	-	100	93.596	Gorilla_gorilla
ENSMICG00000000867	-	83	90.403	ENSHGLG00000015478	CSTF2T	100	87.481	Heterocephalus_glaber_female
ENSMICG00000000867	-	83	90.403	ENSHGLG00100000336	CSTF2T	100	85.648	Heterocephalus_glaber_male
ENSMICG00000000867	-	100	92.000	ENSSTOG00000026303	CSTF2T	100	90.545	Ictidomys_tridecemlineatus
ENSMICG00000000867	-	100	86.020	ENSLAFG00000002058	CSTF2T	100	85.855	Loxodonta_africana
ENSMICG00000000867	-	78	96.220	ENSMFAG00000042009	-	97	96.220	Macaca_fascicularis
ENSMICG00000000867	-	80	96.644	ENSMMUG00000042906	-	99	96.644	Macaca_mulatta
ENSMICG00000000867	-	78	96.220	ENSMNEG00000031410	-	97	96.220	Macaca_nemestrina
ENSMICG00000000867	-	100	88.836	ENSMAUG00000006359	Cstf2t	100	90.431	Mesocricetus_auratus
ENSMICG00000000867	-	100	86.427	ENSMOCG00000020428	Cstf2t	100	87.363	Microtus_ochrogaster
ENSMICG00000000867	-	82	83.111	ENSMALG00000008842	-	81	90.909	Monopterus_albus
ENSMICG00000000867	-	83	89.961	MGP_CAROLIEiJ_G0022872	Cstf2t	100	86.414	Mus_caroli
ENSMICG00000000867	-	83	89.768	ENSMUSG00000053536	Cstf2t	100	85.047	Mus_musculus
ENSMICG00000000867	-	83	88.762	MGP_PahariEiJ_G0014365	Cstf2t	100	85.054	Mus_pahari
ENSMICG00000000867	-	100	85.514	MGP_SPRETEiJ_G0023790	Cstf2t	100	85.358	Mus_spretus
ENSMICG00000000867	-	100	93.954	ENSMPUG00000020141	CSTF2T	100	90.523	Mustela_putorius_furo
ENSMICG00000000867	-	100	84.314	ENSMLUG00000027140	-	100	83.824	Myotis_lucifugus
ENSMICG00000000867	-	100	86.615	ENSMLUG00000011187	-	100	84.923	Myotis_lucifugus
ENSMICG00000000867	-	100	91.814	ENSNGAG00000003304	Cstf2t	100	90.032	Nannospalax_galili
ENSMICG00000000867	-	100	91.276	ENSNLEG00000012025	CSTF2T	100	89.159	Nomascus_leucogenys
ENSMICG00000000867	-	100	85.512	ENSODEG00000012386	CSTF2T	100	84.921	Octodon_degus
ENSMICG00000000867	-	100	84.211	ENSOCUG00000004647	-	100	83.553	Oryctolagus_cuniculus
ENSMICG00000000867	-	100	95.888	ENSOGAG00000014565	CSTF2T	100	95.888	Otolemur_garnettii
ENSMICG00000000867	-	100	87.695	ENSOARG00000013688	-	100	86.574	Ovis_aries
ENSMICG00000000867	-	100	88.750	ENSOARG00000019124	-	100	86.730	Ovis_aries
ENSMICG00000000867	-	79	95.904	ENSPPAG00000032242	-	96	95.904	Pan_paniscus
ENSMICG00000000867	-	100	93.258	ENSPPRG00000018659	CSTF2T	100	90.369	Panthera_pardus
ENSMICG00000000867	-	100	91.057	ENSPTIG00000021145	CSTF2T	100	90.228	Panthera_tigris_altaica
ENSMICG00000000867	-	79	95.904	ENSPTRG00000043097	-	96	95.904	Pan_troglodytes
ENSMICG00000000867	-	78	96.220	ENSPANG00000029734	-	97	96.220	Papio_anubis
ENSMICG00000000867	-	98	52.255	ENSPFOG00000016756	CSTF2T	84	76.119	Poecilia_formosa
ENSMICG00000000867	-	100	93.800	ENSPPYG00000002441	CSTF2T	100	92.210	Pongo_abelii
ENSMICG00000000867	-	100	90.615	ENSPCAG00000000046	CSTF2T	100	90.615	Procavia_capensis
ENSMICG00000000867	-	99	97.199	ENSPCOG00000010982	CSTF2T	99	97.199	Propithecus_coquereli
ENSMICG00000000867	-	100	93.914	ENSPVAG00000006274	CSTF2T	100	90.625	Pteropus_vampyrus
ENSMICG00000000867	-	100	87.244	ENSRNOG00000050289	Cstf2t	100	87.559	Rattus_norvegicus
ENSMICG00000000867	-	100	95.277	ENSRBIG00000029324	CSTF2T	100	94.943	Rhinopithecus_bieti
ENSMICG00000000867	-	100	95.114	ENSRROG00000042507	CSTF2T	100	94.780	Rhinopithecus_roxellana
ENSMICG00000000867	-	100	94.935	ENSSBOG00000022638	CSTF2T	100	94.608	Saimiri_boliviensis_boliviensis
ENSMICG00000000867	-	83	83.111	ENSSDUG00000001049	-	81	89.552	Seriola_dumerili
ENSMICG00000000867	-	83	83.111	ENSSLDG00000010056	-	81	89.552	Seriola_lalandi_dorsalis
ENSMICG00000000867	-	87	94.882	ENSSARG00000002013	-	87	93.701	Sorex_araneus
ENSMICG00000000867	-	87	77.291	ENSSPAG00000009247	-	96	54.886	Stegastes_partitus
ENSMICG00000000867	-	100	93.109	ENSSSCG00000010430	CSTF2T	100	90.600	Sus_scrofa
ENSMICG00000000867	-	77	90.256	ENSTRUG00000004323	-	97	51.618	Takifugu_rubripes
ENSMICG00000000867	-	100	79.092	ENSTBEG00000014379	CSTF2T	100	81.380	Tupaia_belangeri
ENSMICG00000000867	-	100	91.667	ENSTTRG00000003341	CSTF2T	100	89.465	Tursiops_truncatus
ENSMICG00000000867	-	100	89.506	ENSUMAG00000011141	CSTF2T	100	88.889	Ursus_maritimus
ENSMICG00000000867	-	64	96.020	ENSVVUG00000002575	CSTF2T	88	96.117	Vulpes_vulpes