EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000001202 (Gene tree)
Gene ID: 105878489
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 15208 bases
Position: chr5:7191426-7206633
Accession: 105878489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000048092	KH_1	PF00013.29	1.8e-07	1	1
ENSMICP00000038611	KH_1	PF00013.29	1.8e-07	1	1
ENSMICP00000030188	KH_1	PF00013.29	3.5e-07	1	1
ENSMICP00000001095	KH_1	PF00013.29	3.6e-07	1	1
ENSMICP00000019988	KH_1	PF00013.29	4e-07	1	1
ENSMICP00000048092	zf-CCHC	PF00098.23	0.00016	1	1
ENSMICP00000038611	zf-CCHC	PF00098.23	0.00016	1	1
ENSMICP00000001095	zf-CCHC	PF00098.23	0.00024	1	1
ENSMICP00000030188	zf-CCHC	PF00098.23	0.00024	1	1
ENSMICP00000019988	zf-CCHC	PF00098.23	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000050903	SF1-202	3600	XM_012777983	ENSMICP00000030188	638 (aa)	XP_012633437	UPI00063FAEB6
ENSMICT00000067298	SF1-206	1278	-	ENSMICP00000048092	425 (aa)	-	UPI000C2E9F8E
ENSMICT00000060937	SF1-201	3762	-	ENSMICP00000045210	110 (aa)	-	UPI00085B4196
ENSMICT00000055067	SF1-205	1260	-	ENSMICP00000038611	419 (aa)	-	UPI000C2EBBC3
ENSMICT00000026437	SF1-204	2025	XM_012777989	ENSMICP00000019988	674 (aa)	XP_012633443	UPI000C2ECDD4
ENSMICT00000001202	SF1-203	1914	XM_012777986	ENSMICP00000001095	637 (aa)	XP_012633440	UPI00085B07AE

Gene Model

Click here to download ENSMICG00000001202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000001202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000001202	SF1	90	80.720	ENSAPOG00000012341	sf1	61	75.581	Acanthochromis_polyacanthus
ENSMICG00000001202	SF1	94	99.500	ENSAMEG00000017828	SF1	100	92.379	Ailuropoda_melanoleuca
ENSMICG00000001202	SF1	89	82.493	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSMICG00000001202	SF1	90	80.206	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSMICG00000001202	SF1	90	80.206	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSMICG00000001202	SF1	89	81.365	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSMICG00000001202	SF1	100	99.687	ENSANAG00000026664	-	100	99.687	Aotus_nancymaae
ENSMICG00000001202	SF1	96	87.255	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSMICG00000001202	SF1	88	84.054	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSMICG00000001202	SF1	88	85.600	ENSAMXG00000003630	sf1	50	82.507	Astyanax_mexicanus
ENSMICG00000001202	SF1	100	99.844	ENSBTAG00000001035	SF1	100	99.844	Bos_taurus
ENSMICG00000001202	SF1	100	99.844	ENSCJAG00000002780	SF1	100	99.844	Callithrix_jacchus
ENSMICG00000001202	SF1	100	99.687	ENSCAFG00000014239	SF1	100	99.687	Canis_familiaris
ENSMICG00000001202	SF1	100	99.844	ENSCAFG00020014381	SF1	100	99.844	Canis_lupus_dingo
ENSMICG00000001202	SF1	100	99.844	ENSCHIG00000025867	SF1	100	99.844	Capra_hircus
ENSMICG00000001202	SF1	82	98.571	ENSTSYG00000033618	SF1	98	98.571	Carlito_syrichta
ENSMICG00000001202	SF1	93	99.244	ENSCAPG00000010762	SF1	100	78.855	Cavia_aperea
ENSMICG00000001202	SF1	98	99.203	ENSCPOG00000012290	SF1	100	99.628	Cavia_porcellus
ENSMICG00000001202	SF1	100	99.687	ENSCCAG00000037881	SF1	100	99.687	Cebus_capucinus
ENSMICG00000001202	SF1	99	85.646	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSMICG00000001202	SF1	100	99.844	ENSCATG00000011564	SF1	100	99.844	Cercocebus_atys
ENSMICG00000001202	SF1	96	99.755	ENSCSAG00000007258	SF1	98	100.000	Chlorocebus_sabaeus
ENSMICG00000001202	SF1	89	92.876	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSMICG00000001202	SF1	93	89.673	ENSCPBG00000023763	SF1	66	85.300	Chrysemys_picta_bellii
ENSMICG00000001202	SF1	86	59.786	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSMICG00000001202	SF1	86	58.987	ENSCSAVG00000009055	-	72	63.576	Ciona_savignyi
ENSMICG00000001202	SF1	100	99.844	ENSCANG00000042201	SF1	100	99.844	Colobus_angolensis_palliatus
ENSMICG00000001202	SF1	100	99.374	ENSCGRG00001003677	Sf1	100	99.374	Cricetulus_griseus_chok1gshd
ENSMICG00000001202	SF1	93	98.992	ENSCGRG00000001708	Sf1	99	99.255	Cricetulus_griseus_crigri
ENSMICG00000001202	SF1	93	78.133	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSMICG00000001202	SF1	89	84.097	ENSCVAG00000001670	sf1	64	78.484	Cyprinodon_variegatus
ENSMICG00000001202	SF1	94	81.188	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSMICG00000001202	SF1	96	99.020	ENSDNOG00000001282	SF1	98	99.442	Dasypus_novemcinctus
ENSMICG00000001202	SF1	100	99.844	ENSDORG00000016334	Sf1	100	99.844	Dipodomys_ordii
ENSMICG00000001202	SF1	93	89.169	ENSETEG00000012830	SF1	77	91.171	Echinops_telfairi
ENSMICG00000001202	SF1	96	99.265	ENSEASG00005018272	SF1	98	99.628	Equus_asinus_asinus
ENSMICG00000001202	SF1	96	99.510	ENSECAG00000024544	SF1	98	99.814	Equus_caballus
ENSMICG00000001202	SF1	83	98.870	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSMICG00000001202	SF1	88	81.217	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSMICG00000001202	SF1	100	99.687	ENSFCAG00000012231	SF1	100	99.687	Felis_catus
ENSMICG00000001202	SF1	93	99.748	ENSFDAG00000009833	SF1	99	90.282	Fukomys_damarensis
ENSMICG00000001202	SF1	91	79.949	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSMICG00000001202	SF1	79	87.683	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSMICG00000001202	SF1	91	83.679	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSMICG00000001202	SF1	92	79.798	ENSGACG00000000826	sf1	67	78.750	Gasterosteus_aculeatus
ENSMICG00000001202	SF1	88	92.432	ENSGAGG00000021691	SF1	72	85.907	Gopherus_agassizii
ENSMICG00000001202	SF1	89	82.677	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSMICG00000001202	SF1	100	99.530	ENSHGLG00000009541	SF1	100	99.530	Heterocephalus_glaber_female
ENSMICG00000001202	SF1	96	86.085	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSMICG00000001202	SF1	93	99.748	ENSHGLG00100013879	-	93	94.521	Heterocephalus_glaber_male
ENSMICG00000001202	SF1	88	88.204	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSMICG00000001202	SF1	89	80.879	ENSHCOG00000011388	sf1	59	75.787	Hippocampus_comes
ENSMICG00000001202	SF1	91	89.637	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSMICG00000001202	SF1	98	99.841	ENSSTOG00000009790	-	100	99.841	Ictidomys_tridecemlineatus
ENSMICG00000001202	SF1	100	99.687	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSMICG00000001202	SF1	91	81.633	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSMICG00000001202	SF1	89	81.984	ENSLBEG00000019836	sf1	64	77.751	Labrus_bergylta
ENSMICG00000001202	SF1	90	80.840	ENSLACG00000018493	SF1	86	69.590	Latimeria_chalumnae
ENSMICG00000001202	SF1	88	85.067	ENSLOCG00000002130	sf1	57	84.718	Lepisosteus_oculatus
ENSMICG00000001202	SF1	99	95.659	ENSLAFG00000007201	SF1	100	95.659	Loxodonta_africana
ENSMICG00000001202	SF1	100	99.844	ENSMFAG00000033122	SF1	100	99.844	Macaca_fascicularis
ENSMICG00000001202	SF1	100	99.687	ENSMMUG00000022606	SF1	100	99.841	Macaca_mulatta
ENSMICG00000001202	SF1	100	99.844	ENSMNEG00000037901	SF1	100	99.844	Macaca_nemestrina
ENSMICG00000001202	SF1	100	97.852	ENSMLEG00000040706	SF1	100	97.852	Mandrillus_leucophaeus
ENSMICG00000001202	SF1	90	80.720	ENSMAMG00000001780	sf1	59	77.482	Mastacembelus_armatus
ENSMICG00000001202	SF1	89	82.415	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSMICG00000001202	SF1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSMICG00000001202	SF1	100	99.216	ENSMOCG00000022038	Sf1	100	99.216	Microtus_ochrogaster
ENSMICG00000001202	SF1	88	81.501	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSMICG00000001202	SF1	94	98.246	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSMICG00000001202	SF1	89	82.667	ENSMALG00000020521	sf1	69	75.887	Monopterus_albus
ENSMICG00000001202	SF1	100	99.218	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSMICG00000001202	SF1	100	99.218	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSMICG00000001202	SF1	100	99.218	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSMICG00000001202	SF1	100	99.218	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSMICG00000001202	SF1	100	98.592	ENSMPUG00000012684	SF1	100	98.592	Mustela_putorius_furo
ENSMICG00000001202	SF1	96	95.343	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSMICG00000001202	SF1	99	99.525	ENSMLUG00000015217	-	99	99.525	Myotis_lucifugus
ENSMICG00000001202	SF1	100	99.373	ENSNGAG00000005550	Sf1	100	99.373	Nannospalax_galili
ENSMICG00000001202	SF1	88	84.054	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSMICG00000001202	SF1	100	99.687	ENSNLEG00000005236	-	100	99.687	Nomascus_leucogenys
ENSMICG00000001202	SF1	92	98.465	ENSMEUG00000013424	SF1	100	98.493	Notamacropus_eugenii
ENSMICG00000001202	SF1	83	99.153	ENSOPRG00000005008	SF1	100	99.394	Ochotona_princeps
ENSMICG00000001202	SF1	96	97.059	ENSODEG00000006102	-	100	86.133	Octodon_degus
ENSMICG00000001202	SF1	89	82.677	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSMICG00000001202	SF1	78	86.747	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSMICG00000001202	SF1	99	99.524	ENSOCUG00000026486	SF1	100	99.524	Oryctolagus_cuniculus
ENSMICG00000001202	SF1	90	80.102	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSMICG00000001202	SF1	92	79.052	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSMICG00000001202	SF1	89	80.366	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSMICG00000001202	SF1	91	80.051	ENSOMEG00000005210	sf1	60	77.698	Oryzias_melastigma
ENSMICG00000001202	SF1	100	99.843	ENSOGAG00000016196	SF1	100	99.843	Otolemur_garnettii
ENSMICG00000001202	SF1	96	99.755	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSMICG00000001202	SF1	99	99.045	ENSPPAG00000002799	-	100	99.837	Pan_paniscus
ENSMICG00000001202	SF1	98	99.681	ENSPPRG00000013566	SF1	100	99.837	Panthera_pardus
ENSMICG00000001202	SF1	95	99.010	ENSPTIG00000016141	SF1	80	98.876	Panthera_tigris_altaica
ENSMICG00000001202	SF1	100	99.687	ENSPTRG00000003846	SF1	100	99.687	Pan_troglodytes
ENSMICG00000001202	SF1	100	99.523	ENSPANG00000020754	SF1	100	99.523	Papio_anubis
ENSMICG00000001202	SF1	77	79.341	ENSPKIG00000012116	sf1	89	73.563	Paramormyrops_kingsleyae
ENSMICG00000001202	SF1	63	90.226	ENSPSIG00000003610	SF1	97	74.853	Pelodiscus_sinensis
ENSMICG00000001202	SF1	100	99.373	ENSPEMG00000010463	Sf1	100	99.373	Peromyscus_maniculatus_bairdii
ENSMICG00000001202	SF1	80	72.485	ENSPMAG00000008272	sf1	53	67.297	Petromyzon_marinus
ENSMICG00000001202	SF1	100	98.748	ENSPCIG00000018173	SF1	100	98.748	Phascolarctos_cinereus
ENSMICG00000001202	SF1	91	85.526	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSMICG00000001202	SF1	88	83.641	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSMICG00000001202	SF1	88	83.641	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSMICG00000001202	SF1	90	82.078	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSMICG00000001202	SF1	100	99.530	ENSPPYG00000003098	-	100	99.530	Pongo_abelii
ENSMICG00000001202	SF1	94	98.995	ENSPCAG00000013631	SF1	93	94.089	Procavia_capensis
ENSMICG00000001202	SF1	100	100.000	ENSPCOG00000027546	SF1	100	100.000	Propithecus_coquereli
ENSMICG00000001202	SF1	100	95.414	ENSPVAG00000016938	SF1	92	93.109	Pteropus_vampyrus
ENSMICG00000001202	SF1	89	82.415	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSMICG00000001202	SF1	89	84.960	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSMICG00000001202	SF1	100	99.218	ENSRNOG00000021085	Sf1	100	99.218	Rattus_norvegicus
ENSMICG00000001202	SF1	100	95.775	ENSRBIG00000042818	SF1	100	95.775	Rhinopithecus_bieti
ENSMICG00000001202	SF1	100	97.613	ENSRROG00000045655	SF1	100	100.000	Rhinopithecus_roxellana
ENSMICG00000001202	SF1	86	38.725	YLR116W	MSL5	61	43.366	Saccharomyces_cerevisiae
ENSMICG00000001202	SF1	99	80.861	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSMICG00000001202	SF1	96	91.727	ENSSHAG00000006841	SF1	77	91.253	Sarcophilus_harrisii
ENSMICG00000001202	SF1	93	80.250	ENSSFOG00015021978	sf1	58	77.670	Scleropages_formosus
ENSMICG00000001202	SF1	94	77.108	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSMICG00000001202	SF1	90	80.000	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSMICG00000001202	SF1	90	80.000	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSMICG00000001202	SF1	93	94.710	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSMICG00000001202	SF1	85	92.157	ENSSPUG00000012907	SF1	86	81.382	Sphenodon_punctatus
ENSMICG00000001202	SF1	90	80.720	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSMICG00000001202	SF1	100	99.687	ENSSSCG00000013021	SF1	100	99.687	Sus_scrofa
ENSMICG00000001202	SF1	94	71.921	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSMICG00000001202	SF1	93	91.688	ENSTBEG00000013133	SF1	79	98.876	Tupaia_belangeri
ENSMICG00000001202	SF1	93	93.955	ENSTTRG00000008857	SF1	100	95.717	Tursiops_truncatus
ENSMICG00000001202	SF1	82	96.947	ENSUAMG00000011977	SF1	100	96.947	Ursus_americanus
ENSMICG00000001202	SF1	96	98.526	ENSUMAG00000007268	SF1	90	98.864	Ursus_maritimus
ENSMICG00000001202	SF1	71	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSMICG00000001202	SF1	96	99.755	ENSVVUG00000028585	SF1	98	100.000	Vulpes_vulpes
ENSMICG00000001202	SF1	99	79.625	ENSXETG00000008434	sf1	68	81.752	Xenopus_tropicalis
ENSMICG00000001202	SF1	87	84.699	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSMICG00000001202	SF1	89	82.895	ENSXMAG00000007822	sf1	62	78.947	Xiphophorus_maculatus