EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSMICG00000001474 (Gene tree)
Gene ID: 105857286
Gene Symbol: CASC1
Alias: FLJ10921|LAS1|PPP1R54
Full Name: KRAS proto-oncogene%2C GTPase
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 111253 bases
Position: chr7:85266962-85378214
Accession: 105857286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000032203	GTP_EFTU	PF00009.27	7.3e-07	1	1
ENSMICP00000032203	MMR_HSR1	PF01926.23	2e-05	1	1
ENSMICP00000008084	MMR_HSR1	PF01926.23	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000048874	CASC1-203	228	-	ENSMICP00000033030	75 (aa)	-	UPI00085AF207
ENSMICT00000008879	CASC1-202	857	XM_012739557	ENSMICP00000008084	189 (aa)	XP_012595011	UPI000643CEC4
ENSMICT00000063527	CASC1-205	2480	XM_012739550	ENSMICP00000050465	722 (aa)	XP_012595004	UPI0006429F40
ENSMICT00000001474	CASC1-207	1974	-	ENSMICP00000001345	657 (aa)	-	UPI000C2ED530
ENSMICT00000034120	CASC1-201	998	XM_012739556	ENSMICP00000032203	207 (aa)	XP_012595010	UPI00085B451B
ENSMICT00000039774	CASC1-206	2462	XM_012739551	ENSMICP00000022796	716 (aa)	XP_012595005	UPI00064357C6
ENSMICT00000031282	CASC1-204	132	-	ENSMICP00000018647	43 (aa)	-	UPI00085B3504

Gene Model

Click here to download ENSMICG00000001474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000001474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000001474	CASC1	83	32.278	ENSMICG00000031565	RAB6A	75	32.278
ENSMICG00000001474	CASC1	86	37.195	ENSMICG00000029171	RAB1B	81	37.195
ENSMICG00000001474	CASC1	86	37.952	ENSMICG00000044410	RAB39B	78	37.952
ENSMICG00000001474	CASC1	85	30.488	ENSMICG00000030661	RAB12	64	31.373
ENSMICG00000001474	CASC1	84	30.539	ENSMICG00000042188	RASL11B	69	30.814
ENSMICG00000001474	CASC1	85	37.037	ENSMICG00000034540	RAB2A	70	36.667
ENSMICG00000001474	CASC1	81	36.774	ENSMICG00000047356	RAB35	82	34.132
ENSMICG00000001474	CASC1	86	35.329	ENSMICG00000038752	-	78	34.615
ENSMICG00000001474	CASC1	88	41.667	ENSMICG00000006266	RERG	84	41.667
ENSMICG00000001474	CASC1	87	37.725	ENSMICG00000041504	RAB11A	70	36.774
ENSMICG00000001474	CASC1	77	38.095	ENSMICG00000033790	RHEB	86	38.235
ENSMICG00000001474	CASC1	87	35.294	ENSMICG00000034809	-	69	35.443
ENSMICG00000001474	CASC1	85	32.515	ENSMICG00000011086	RAB5B	77	32.335
ENSMICG00000001474	CASC1	85	31.737	ENSMICG00000034851	RAB33A	72	31.176
ENSMICG00000001474	CASC1	85	34.356	ENSMICG00000002882	RAB31	83	34.356
ENSMICG00000001474	CASC1	85	34.969	ENSMICG00000014037	RAB23	63	32.237
ENSMICG00000001474	CASC1	85	32.515	ENSMICG00000041608	RAB5C	78	31.953
ENSMICG00000001474	CASC1	87	33.133	ENSMICG00000017280	RAB18	81	33.133
ENSMICG00000001474	CASC1	86	30.000	ENSMICG00000008382	-	77	30.000
ENSMICG00000001474	CASC1	85	33.333	ENSMICG00000041433	-	76	32.026
ENSMICG00000001474	CASC1	93	33.516	ENSMICG00000012002	RAB30	89	33.516
ENSMICG00000001474	CASC1	100	80.952	ENSMICG00000036237	-	91	90.244
ENSMICG00000001474	CASC1	87	36.527	ENSMICG00000034065	-	70	35.484
ENSMICG00000001474	CASC1	67	38.281	ENSMICG00000029915	-	63	37.681
ENSMICG00000001474	CASC1	86	32.317	ENSMICG00000003350	RAB14	70	31.579
ENSMICG00000001474	CASC1	83	32.278	ENSMICG00000049590	RAB6B	75	32.278
ENSMICG00000001474	CASC1	85	33.140	ENSMICG00000029724	RASL11A	74	32.240
ENSMICG00000001474	CASC1	91	31.606	ENSMICG00000002230	RAB25	70	33.553
ENSMICG00000001474	CASC1	86	32.927	ENSMICG00000013101	RAB15	71	32.237
ENSMICG00000001474	CASC1	86	37.805	ENSMICG00000012587	RAB1A	80	37.805
ENSMICG00000001474	CASC1	97	36.216	ENSMICG00000010340	-	91	36.216
ENSMICG00000001474	CASC1	87	56.886	ENSMICG00000049226	MRAS	86	55.056
ENSMICG00000001474	CASC1	94	31.667	ENSMICG00000049130	RAB5A	80	31.667
ENSMICG00000001474	CASC1	84	34.756	ENSMICG00000003057	RAB9B	76	33.333
ENSMICG00000001474	CASC1	99	87.302	ENSMICG00000006472	HRAS	99	87.302