EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000001716 (Gene tree)
Gene ID: 105857721
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 137034 bases
Position: chr25:21445058-21582091
Accession: 105857721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000037479	Upf2	PF04050.14	2.4e-32	1	1
ENSMICP00000037479	MIF4G	PF02854.19	1.8e-80	1	3
ENSMICP00000037479	MIF4G	PF02854.19	1.8e-80	2	3
ENSMICP00000037479	MIF4G	PF02854.19	1.8e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000038415	UPF2-201	3639	XM_012740316	ENSMICP00000037479	1212 (aa)	XP_012595770	UPI000C2ED6ED

Gene Model

Click here to download ENSMICG00000001716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000001716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000001716	UPF2	100	93.780	ENSG00000151461	UPF2	99	93.780	Homo_sapiens
ENSMICG00000001716	UPF2	100	79.888	ENSAPOG00000015837	UPF2	100	79.647	Acanthochromis_polyacanthus
ENSMICG00000001716	UPF2	99	99.482	ENSAMEG00000004586	UPF2	95	99.490	Ailuropoda_melanoleuca
ENSMICG00000001716	UPF2	99	87.245	ENSACIG00000018078	UPF2	95	86.735	Amphilophus_citrinellus
ENSMICG00000001716	UPF2	99	86.364	ENSAOCG00000016766	UPF2	100	82.043	Amphiprion_ocellaris
ENSMICG00000001716	UPF2	99	86.364	ENSAPEG00000019084	UPF2	100	82.123	Amphiprion_percula
ENSMICG00000001716	UPF2	99	87.000	ENSATEG00000021677	UPF2	94	86.869	Anabas_testudineus
ENSMICG00000001716	UPF2	100	86.523	ENSAPLG00000010287	UPF2	99	86.124	Anas_platyrhynchos
ENSMICG00000001716	UPF2	100	87.786	ENSACAG00000009259	UPF2	95	96.429	Anolis_carolinensis
ENSMICG00000001716	UPF2	99	99.482	ENSANAG00000028451	UPF2	94	99.490	Aotus_nancymaae
ENSMICG00000001716	UPF2	99	87.245	ENSACLG00000012696	UPF2	95	86.224	Astatotilapia_calliptera
ENSMICG00000001716	UPF2	99	87.755	ENSAMXG00000013700	UPF2	94	87.310	Astyanax_mexicanus
ENSMICG00000001716	UPF2	99	98.964	ENSBTAG00000000288	UPF2	95	98.980	Bos_taurus
ENSMICG00000001716	UPF2	100	94.160	ENSCJAG00000020685	UPF2	99	94.160	Callithrix_jacchus
ENSMICG00000001716	UPF2	99	98.964	ENSCAFG00000004839	UPF2	95	98.980	Canis_familiaris
ENSMICG00000001716	UPF2	100	97.774	ENSCAFG00020005882	UPF2	100	97.774	Canis_lupus_dingo
ENSMICG00000001716	UPF2	99	98.964	ENSCHIG00000020359	UPF2	95	98.980	Capra_hircus
ENSMICG00000001716	UPF2	100	95.288	ENSTSYG00000000935	UPF2	100	95.288	Carlito_syrichta
ENSMICG00000001716	UPF2	75	89.480	ENSCAPG00000016658	UPF2	80	88.290	Cavia_aperea
ENSMICG00000001716	UPF2	99	99.487	ENSCPOG00000008809	UPF2	95	99.490	Cavia_porcellus
ENSMICG00000001716	UPF2	99	99.482	ENSCCAG00000035991	UPF2	95	99.490	Cebus_capucinus
ENSMICG00000001716	UPF2	100	94.094	ENSCATG00000032679	UPF2	100	93.502	Cercocebus_atys
ENSMICG00000001716	UPF2	99	99.482	ENSCLAG00000011434	UPF2	95	99.490	Chinchilla_lanigera
ENSMICG00000001716	UPF2	100	94.094	ENSCSAG00000013372	UPF2	99	94.094	Chlorocebus_sabaeus
ENSMICG00000001716	UPF2	87	99.330	ENSCHOG00000000422	UPF2	85	99.330	Choloepus_hoffmanni
ENSMICG00000001716	UPF2	99	97.959	ENSCPBG00000027823	UPF2	95	97.959	Chrysemys_picta_bellii
ENSMICG00000001716	UPF2	78	48.024	ENSCSAVG00000007772	-	91	52.878	Ciona_savignyi
ENSMICG00000001716	UPF2	100	89.628	ENSCANG00000040396	UPF2	100	89.470	Colobus_angolensis_palliatus
ENSMICG00000001716	UPF2	99	98.469	ENSCGRG00001019347	Upf2	95	98.469	Cricetulus_griseus_chok1gshd
ENSMICG00000001716	UPF2	99	98.469	ENSCGRG00000017993	Upf2	95	98.469	Cricetulus_griseus_crigri
ENSMICG00000001716	UPF2	90	81.069	ENSCSEG00000003520	UPF2	99	78.703	Cynoglossus_semilaevis
ENSMICG00000001716	UPF2	99	86.364	ENSCVAG00000006167	UPF2	95	85.354	Cyprinodon_variegatus
ENSMICG00000001716	UPF2	99	98.446	ENSDNOG00000018160	UPF2	95	98.469	Dasypus_novemcinctus
ENSMICG00000001716	UPF2	99	97.723	ENSDORG00000002478	Upf2	95	97.723	Dipodomys_ordii
ENSMICG00000001716	UPF2	66	100.000	ENSETEG00000011583	-	67	100.000	Echinops_telfairi
ENSMICG00000001716	UPF2	72	68.806	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSMICG00000001716	UPF2	99	99.482	ENSEASG00005019274	UPF2	95	99.505	Equus_asinus_asinus
ENSMICG00000001716	UPF2	99	99.482	ENSECAG00000017022	UPF2	95	99.490	Equus_caballus
ENSMICG00000001716	UPF2	80	96.923	ENSEEUG00000007819	UPF2	77	96.939	Erinaceus_europaeus
ENSMICG00000001716	UPF2	99	88.384	ENSELUG00000012014	UPF2	95	86.869	Esox_lucius
ENSMICG00000001716	UPF2	100	98.883	ENSFCAG00000005785	UPF2	99	93.459	Felis_catus
ENSMICG00000001716	UPF2	99	96.923	ENSFALG00000001889	UPF2	93	96.939	Ficedula_albicollis
ENSMICG00000001716	UPF2	99	98.980	ENSFDAG00000014348	UPF2	95	98.980	Fukomys_damarensis
ENSMICG00000001716	UPF2	99	79.811	ENSFHEG00000009826	UPF2	99	80.807	Fundulus_heteroclitus
ENSMICG00000001716	UPF2	90	85.427	ENSGMOG00000005557	UPF2	95	84.694	Gadus_morhua
ENSMICG00000001716	UPF2	99	96.923	ENSGALG00000033772	UPF2	95	96.939	Gallus_gallus
ENSMICG00000001716	UPF2	100	76.953	ENSGAFG00000020867	UPF2	99	79.453	Gambusia_affinis
ENSMICG00000001716	UPF2	90	81.434	ENSGACG00000001080	UPF2	95	86.364	Gasterosteus_aculeatus
ENSMICG00000001716	UPF2	99	96.939	ENSGAGG00000002700	UPF2	95	96.939	Gopherus_agassizii
ENSMICG00000001716	UPF2	100	93.858	ENSGGOG00000001479	UPF2	100	93.265	Gorilla_gorilla
ENSMICG00000001716	UPF2	99	87.245	ENSHBUG00000004249	UPF2	95	86.224	Haplochromis_burtoni
ENSMICG00000001716	UPF2	99	99.482	ENSHGLG00000015176	-	95	99.490	Heterocephalus_glaber_female
ENSMICG00000001716	UPF2	100	80.678	ENSHGLG00000003822	-	99	80.442	Heterocephalus_glaber_female
ENSMICG00000001716	UPF2	99	99.482	ENSHGLG00100010036	UPF2	95	99.490	Heterocephalus_glaber_male
ENSMICG00000001716	UPF2	100	78.132	ENSHCOG00000004025	UPF2	94	86.364	Hippocampus_comes
ENSMICG00000001716	UPF2	99	87.755	ENSIPUG00000015524	UPF2	95	86.224	Ictalurus_punctatus
ENSMICG00000001716	UPF2	99	99.490	ENSSTOG00000013075	UPF2	95	99.490	Ictidomys_tridecemlineatus
ENSMICG00000001716	UPF2	99	96.939	ENSJJAG00000004913	Upf2	95	96.939	Jaculus_jaculus
ENSMICG00000001716	UPF2	99	78.745	ENSKMAG00000001071	UPF2	94	86.364	Kryptolebias_marmoratus
ENSMICG00000001716	UPF2	100	83.766	ENSLBEG00000016394	-	100	84.228	Labrus_bergylta
ENSMICG00000001716	UPF2	81	84.105	ENSLBEG00000000728	-	92	84.205	Labrus_bergylta
ENSMICG00000001716	UPF2	99	86.500	ENSLACG00000015945	UPF2	95	89.119	Latimeria_chalumnae
ENSMICG00000001716	UPF2	99	90.355	ENSLOCG00000015698	UPF2	95	90.355	Lepisosteus_oculatus
ENSMICG00000001716	UPF2	100	94.016	ENSMFAG00000043865	UPF2	100	93.068	Macaca_fascicularis
ENSMICG00000001716	UPF2	100	94.016	ENSMMUG00000008241	UPF2	99	94.016	Macaca_mulatta
ENSMICG00000001716	UPF2	83	98.220	ENSMNEG00000008062	UPF2	99	98.220	Macaca_nemestrina
ENSMICG00000001716	UPF2	100	93.502	ENSMLEG00000036120	UPF2	99	97.851	Mandrillus_leucophaeus
ENSMICG00000001716	UPF2	99	86.000	ENSMAMG00000018276	UPF2	100	82.574	Mastacembelus_armatus
ENSMICG00000001716	UPF2	99	87.245	ENSMZEG00005021595	UPF2	95	86.224	Maylandia_zebra
ENSMICG00000001716	UPF2	99	96.907	ENSMGAG00000004573	UPF2	95	96.923	Meleagris_gallopavo
ENSMICG00000001716	UPF2	99	98.469	ENSMAUG00000016512	Upf2	95	98.469	Mesocricetus_auratus
ENSMICG00000001716	UPF2	99	98.469	ENSMOCG00000008263	Upf2	95	98.469	Microtus_ochrogaster
ENSMICG00000001716	UPF2	100	81.877	ENSMMOG00000006528	UPF2	100	81.994	Mola_mola
ENSMICG00000001716	UPF2	99	97.436	ENSMODG00000016794	UPF2	95	97.449	Monodelphis_domestica
ENSMICG00000001716	UPF2	100	81.171	ENSMALG00000002663	UPF2	100	79.952	Monopterus_albus
ENSMICG00000001716	UPF2	99	98.469	MGP_CAROLIEiJ_G0023157	Upf2	95	98.469	Mus_caroli
ENSMICG00000001716	UPF2	99	98.469	ENSMUSG00000043241	Upf2	95	98.469	Mus_musculus
ENSMICG00000001716	UPF2	100	91.798	MGP_PahariEiJ_G0019217	Upf2	95	98.469	Mus_pahari
ENSMICG00000001716	UPF2	99	98.469	MGP_SPRETEiJ_G0024075	Upf2	95	98.469	Mus_spretus
ENSMICG00000001716	UPF2	99	99.482	ENSMPUG00000001064	UPF2	95	99.490	Mustela_putorius_furo
ENSMICG00000001716	UPF2	99	99.490	ENSMLUG00000000228	UPF2	95	99.490	Myotis_lucifugus
ENSMICG00000001716	UPF2	99	87.245	ENSNBRG00000013629	UPF2	95	86.224	Neolamprologus_brichardi
ENSMICG00000001716	UPF2	100	94.000	ENSNLEG00000012058	UPF2	100	94.000	Nomascus_leucogenys
ENSMICG00000001716	UPF2	58	97.927	ENSMEUG00000002180	-	59	97.927	Notamacropus_eugenii
ENSMICG00000001716	UPF2	81	100.000	ENSOPRG00000006801	-	77	100.000	Ochotona_princeps
ENSMICG00000001716	UPF2	99	98.974	ENSODEG00000001290	UPF2	95	98.980	Octodon_degus
ENSMICG00000001716	UPF2	99	87.755	ENSONIG00000017991	UPF2	95	86.735	Oreochromis_niloticus
ENSMICG00000001716	UPF2	99	98.446	ENSOCUG00000006230	UPF2	95	98.469	Oryctolagus_cuniculus
ENSMICG00000001716	UPF2	99	84.577	ENSORLG00000017189	UPF2	95	84.848	Oryzias_latipes
ENSMICG00000001716	UPF2	99	84.577	ENSORLG00020005969	UPF2	95	84.848	Oryzias_latipes_hni
ENSMICG00000001716	UPF2	99	84.577	ENSORLG00015005713	UPF2	95	84.848	Oryzias_latipes_hsok
ENSMICG00000001716	UPF2	100	75.975	ENSOMEG00000023420	UPF2	98	76.544	Oryzias_melastigma
ENSMICG00000001716	UPF2	100	94.405	ENSOGAG00000005796	UPF2	99	94.405	Otolemur_garnettii
ENSMICG00000001716	UPF2	99	98.964	ENSOARG00000014587	UPF2	95	98.980	Ovis_aries
ENSMICG00000001716	UPF2	100	91.997	ENSPPAG00000037953	UPF2	100	91.521	Pan_paniscus
ENSMICG00000001716	UPF2	100	93.459	ENSPPRG00000000690	UPF2	99	93.459	Panthera_pardus
ENSMICG00000001716	UPF2	100	93.459	ENSPTIG00000008867	UPF2	99	93.459	Panthera_tigris_altaica
ENSMICG00000001716	UPF2	100	93.858	ENSPTRG00000002291	UPF2	100	93.265	Pan_troglodytes
ENSMICG00000001716	UPF2	100	94.016	ENSPANG00000023399	UPF2	100	93.423	Papio_anubis
ENSMICG00000001716	UPF2	99	85.714	ENSPKIG00000025502	UPF2	95	85.787	Paramormyrops_kingsleyae
ENSMICG00000001716	UPF2	62	91.368	ENSPSIG00000015158	UPF2	95	91.368	Pelodiscus_sinensis
ENSMICG00000001716	UPF2	100	77.463	ENSPMGG00000005259	UPF2	95	83.838	Periophthalmus_magnuspinnatus
ENSMICG00000001716	UPF2	92	95.044	ENSPEMG00000015731	Upf2	94	95.044	Peromyscus_maniculatus_bairdii
ENSMICG00000001716	UPF2	99	96.410	ENSPCIG00000006656	UPF2	95	96.429	Phascolarctos_cinereus
ENSMICG00000001716	UPF2	100	76.989	ENSPFOG00000017118	UPF2	99	79.688	Poecilia_formosa
ENSMICG00000001716	UPF2	100	76.989	ENSPLAG00000005094	UPF2	99	79.688	Poecilia_latipinna
ENSMICG00000001716	UPF2	100	76.989	ENSPMEG00000017009	UPF2	99	79.688	Poecilia_mexicana
ENSMICG00000001716	UPF2	100	76.314	ENSPREG00000021880	UPF2	95	85.859	Poecilia_reticulata
ENSMICG00000001716	UPF2	63	99.482	ENSPPYG00000002089	-	92	99.490	Pongo_abelii
ENSMICG00000001716	UPF2	99	98.446	ENSPCAG00000000684	UPF2	95	98.469	Procavia_capensis
ENSMICG00000001716	UPF2	100	96.515	ENSPCOG00000021656	UPF2	100	96.515	Propithecus_coquereli
ENSMICG00000001716	UPF2	99	99.487	ENSPVAG00000017286	UPF2	95	99.490	Pteropus_vampyrus
ENSMICG00000001716	UPF2	99	87.245	ENSPNYG00000017096	UPF2	95	86.224	Pundamilia_nyererei
ENSMICG00000001716	UPF2	99	87.755	ENSPNAG00000009357	UPF2	95	87.310	Pygocentrus_nattereri
ENSMICG00000001716	UPF2	99	93.775	ENSRNOG00000023593	Upf2	98	100.000	Rattus_norvegicus
ENSMICG00000001716	UPF2	99	99.490	ENSRBIG00000037780	UPF2	95	99.490	Rhinopithecus_bieti
ENSMICG00000001716	UPF2	100	94.090	ENSRROG00000043547	UPF2	100	93.423	Rhinopithecus_roxellana
ENSMICG00000001716	UPF2	99	99.490	ENSSBOG00000020012	UPF2	95	99.490	Saimiri_boliviensis_boliviensis
ENSMICG00000001716	UPF2	99	87.817	ENSSFOG00015023788	upf2	95	87.817	Scleropages_formosus
ENSMICG00000001716	UPF2	90	79.965	ENSSMAG00000007637	UPF2	95	85.075	Scophthalmus_maximus
ENSMICG00000001716	UPF2	100	82.753	ENSSDUG00000017244	UPF2	100	83.887	Seriola_dumerili
ENSMICG00000001716	UPF2	100	82.329	ENSSLDG00000016866	UPF2	100	83.213	Seriola_lalandi_dorsalis
ENSMICG00000001716	UPF2	100	91.805	ENSSARG00000008615	UPF2	95	98.980	Sorex_araneus
ENSMICG00000001716	UPF2	99	96.429	ENSSPUG00000014544	UPF2	94	96.429	Sphenodon_punctatus
ENSMICG00000001716	UPF2	66	99.482	ENSSSCG00000011117	-	93	99.490	Sus_scrofa
ENSMICG00000001716	UPF2	99	88.959	ENSTGUG00000002163	-	100	89.196	Taeniopygia_guttata
ENSMICG00000001716	UPF2	100	78.159	ENSTRUG00000007519	UPF2	94	84.848	Takifugu_rubripes
ENSMICG00000001716	UPF2	99	84.729	ENSTNIG00000004453	UPF2	99	75.214	Tetraodon_nigroviridis
ENSMICG00000001716	UPF2	92	98.148	ENSTBEG00000012679	UPF2	88	98.148	Tupaia_belangeri
ENSMICG00000001716	UPF2	99	98.964	ENSTTRG00000016388	UPF2	95	98.980	Tursiops_truncatus
ENSMICG00000001716	UPF2	100	93.812	ENSUAMG00000023560	UPF2	95	100.000	Ursus_americanus
ENSMICG00000001716	UPF2	99	99.482	ENSUMAG00000012953	UPF2	90	99.490	Ursus_maritimus
ENSMICG00000001716	UPF2	86	96.774	ENSVPAG00000006763	UPF2	82	96.774	Vicugna_pacos
ENSMICG00000001716	UPF2	99	98.964	ENSVVUG00000006166	UPF2	95	98.980	Vulpes_vulpes
ENSMICG00000001716	UPF2	100	79.276	ENSXETG00000033103	UPF2	93	92.045	Xenopus_tropicalis
ENSMICG00000001716	UPF2	91	81.229	ENSXCOG00000011604	UPF2	100	79.375	Xiphophorus_couchianus
ENSMICG00000001716	UPF2	91	81.485	ENSXMAG00000017209	UPF2	99	79.375	Xiphophorus_maculatus