EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMICG00000002050 (Gene tree)
Gene ID
105878707
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Plus strand
Length
45088 bases
Position
chr2:70575768-70620855
Accession
105878707
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000033597CSDPF00313.221.9e-8415
ENSMICP00000033597CSDPF00313.221.9e-8425
ENSMICP00000033597CSDPF00313.221.9e-8435
ENSMICP00000033597CSDPF00313.221.9e-8445
ENSMICP00000033597CSDPF00313.221.9e-8455
ENSMICP00000034452CSDPF00313.222.3e-8415
ENSMICP00000034452CSDPF00313.222.3e-8425
ENSMICP00000034452CSDPF00313.222.3e-8435
ENSMICP00000034452CSDPF00313.222.3e-8445
ENSMICP00000034452CSDPF00313.222.3e-8455
ENSMICP00000022855CSDPF00313.222.8e-8415
ENSMICP00000022855CSDPF00313.222.8e-8425
ENSMICP00000022855CSDPF00313.222.8e-8435
ENSMICP00000022855CSDPF00313.222.8e-8445
ENSMICP00000022855CSDPF00313.222.8e-8455
ENSMICP00000027600CSDPF00313.223.9e-8415
ENSMICP00000027600CSDPF00313.223.9e-8425
ENSMICP00000027600CSDPF00313.223.9e-8435
ENSMICP00000027600CSDPF00313.223.9e-8445
ENSMICP00000027600CSDPF00313.223.9e-8455
ENSMICP00000001877CSDPF00313.221.2e-4813
ENSMICP00000001877CSDPF00313.221.2e-4823
ENSMICP00000001877CSDPF00313.221.2e-4833
ENSMICP00000041701CSDPF00313.224.5e-3812
ENSMICP00000041701CSDPF00313.224.5e-3822
ENSMICP00000021625CSDPF00313.221.8e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000058717CSDE1-2071290-ENSMICP00000041701429 (aa)-UPI000C2ECECF
ENSMICT00000002051CSDE1-2061356-ENSMICP00000001877451 (aa)-UPI00085B343A
ENSMICT00000042500CSDE1-2034927-ENSMICP00000027600870 (aa)-UPI000C2ED776
ENSMICT00000044553CSDE1-2014238XM_012778401ENSMICP00000034452813 (aa)XP_012633855UPI000642F3C9
ENSMICT00000048695CSDE1-2042406-ENSMICP00000033597801 (aa)-UPI000C2EB774
ENSMICT00000050031CSDE1-2024326XM_012778399ENSMICP00000022855844 (aa)XP_012633853UPI000643749A
ENSMICT00000029838CSDE1-205363-ENSMICP00000021625120 (aa)-UPI00085B4697
Gene Model
Click here to download ENSMICG00000002050's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000002050's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000002050CSDE110098.401ENSG00000009307CSDE1100100.000Homo_sapiens
ENSMICG00000002050CSDE19975.278ENSAPOG00000015538csde110078.052Acanthochromis_polyacanthus
ENSMICG00000002050CSDE110097.297ENSAMEG00000017129CSDE110097.297Ailuropoda_melanoleuca
ENSMICG00000002050CSDE15677.612ENSACIG00000015225-8177.612Amphilophus_citrinellus
ENSMICG00000002050CSDE18676.486ENSACIG00000015175csde110076.486Amphilophus_citrinellus
ENSMICG00000002050CSDE19975.278ENSAOCG00000011510csde110078.182Amphiprion_ocellaris
ENSMICG00000002050CSDE19876.281ENSAPEG00000007194csde110078.182Amphiprion_percula
ENSMICG00000002050CSDE19677.604ENSATEG00000003864csde110077.662Anabas_testudineus
ENSMICG00000002050CSDE19691.503ENSAPLG00000008797CSDE110091.525Anas_platyrhynchos
ENSMICG00000002050CSDE19988.616ENSACAG00000003120CSDE110091.604Anolis_carolinensis
ENSMICG00000002050CSDE17989.394ENSANAG00000028396-9089.744Aotus_nancymaae
ENSMICG00000002050CSDE110098.032ENSANAG00000024665CSDE110098.032Aotus_nancymaae
ENSMICG00000002050CSDE19677.445ENSACLG00000013296csde110077.503Astatotilapia_calliptera
ENSMICG00000002050CSDE19676.593ENSAMXG00000007436csde110076.654Astyanax_mexicanus
ENSMICG00000002050CSDE110097.986ENSBTAG00000000678CSDE110098.044Bos_taurus
ENSMICG00000002050CSDE110098.155ENSCJAG00000012565CSDE110098.155Callithrix_jacchus
ENSMICG00000002050CSDE19898.371ENSCAFG00000009618CSDE110098.371Canis_familiaris
ENSMICG00000002050CSDE19998.661ENSCAFG00020000481CSDE110098.435Canis_lupus_dingo
ENSMICG00000002050CSDE110097.909ENSCHIG00000017250CSDE110098.044Capra_hircus
ENSMICG00000002050CSDE110097.512ENSTSYG00000003747CSDE1100100.000Carlito_syrichta
ENSMICG00000002050CSDE19591.228ENSCAPG00000015128CSDE110091.228Cavia_aperea
ENSMICG00000002050CSDE19998.661ENSCPOG00000040388CSDE19798.661Cavia_porcellus
ENSMICG00000002050CSDE110098.155ENSCCAG00000036794CSDE110098.575Cebus_capucinus
ENSMICG00000002050CSDE19973.602ENSCCAG00000030878-9173.602Cebus_capucinus
ENSMICG00000002050CSDE19676.238ENSCCAG00000033677-9975.772Cebus_capucinus
ENSMICG00000002050CSDE110098.834ENSCATG00000036962CSDE110098.837Cercocebus_atys
ENSMICG00000002050CSDE19998.661ENSCLAG00000006618CSDE110098.175Chinchilla_lanigera
ENSMICG00000002050CSDE110098.341ENSCSAG00000001658CSDE110098.341Chlorocebus_sabaeus
ENSMICG00000002050CSDE110097.239ENSCHOG00000000918CSDE19197.239Choloepus_hoffmanni
ENSMICG00000002050CSDE19989.286ENSCPBG00000016547CSDE110092.356Chrysemys_picta_bellii
ENSMICG00000002050CSDE19741.239ENSCING00000014465-9642.927Ciona_intestinalis
ENSMICG00000002050CSDE19540.749ENSCSAVG00000008100-9940.864Ciona_savignyi
ENSMICG00000002050CSDE19990.520ENSCANG00000031069-9992.265Colobus_angolensis_palliatus
ENSMICG00000002050CSDE110099.068ENSCANG00000035096CSDE110099.068Colobus_angolensis_palliatus
ENSMICG00000002050CSDE19983.036ENSCGRG00001014011-10081.095Cricetulus_griseus_chok1gshd
ENSMICG00000002050CSDE19998.214ENSCGRG00001016833-10097.914Cricetulus_griseus_chok1gshd
ENSMICG00000002050CSDE19998.214ENSCGRG00000002225-10098.218Cricetulus_griseus_crigri
ENSMICG00000002050CSDE19983.036ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSMICG00000002050CSDE19677.445ENSCSEG00000002620csde110077.503Cynoglossus_semilaevis
ENSMICG00000002050CSDE19875.388ENSCVAG00000001344csde110076.883Cyprinodon_variegatus
ENSMICG00000002050CSDE19975.278ENSDARG00000074758csde110077.857Danio_rerio
ENSMICG00000002050CSDE17670.722ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSMICG00000002050CSDE19997.991ENSDNOG00000010287-9497.539Dasypus_novemcinctus
ENSMICG00000002050CSDE19997.991ENSDORG00000011609Csde110097.754Dipodomys_ordii
ENSMICG00000002050CSDE19347.951FBgn0263352Unr7348.795Drosophila_melanogaster
ENSMICG00000002050CSDE19995.954ENSETEG00000002491-8097.238Echinops_telfairi
ENSMICG00000002050CSDE18686.825ENSETEG00000006280-10086.867Echinops_telfairi
ENSMICG00000002050CSDE19967.261ENSETEG00000007109-9968.212Echinops_telfairi
ENSMICG00000002050CSDE110074.777ENSETEG00000013678-9976.762Echinops_telfairi
ENSMICG00000002050CSDE19855.361ENSEBUG00000008647csde19954.221Eptatretus_burgeri
ENSMICG00000002050CSDE19998.884ENSEASG00005006284CSDE110098.371Equus_asinus_asinus
ENSMICG00000002050CSDE19998.884ENSECAG00000020885CSDE110098.371Equus_caballus
ENSMICG00000002050CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSMICG00000002050CSDE19973.111ENSELUG00000015507csde110075.809Esox_lucius
ENSMICG00000002050CSDE110098.647ENSFCAG00000029266CSDE110098.696Felis_catus
ENSMICG00000002050CSDE19987.723ENSFALG00000003407CSDE110091.479Ficedula_albicollis
ENSMICG00000002050CSDE19998.438ENSFDAG00000007882CSDE110098.204Fukomys_damarensis
ENSMICG00000002050CSDE19874.970ENSFHEG00000010799csde110076.779Fundulus_heteroclitus
ENSMICG00000002050CSDE19974.610ENSGMOG00000012731csde110076.971Gadus_morhua
ENSMICG00000002050CSDE19391.432ENSGALG00000002139CSDE19891.432Gallus_gallus
ENSMICG00000002050CSDE18876.453ENSGAFG00000005241csde19576.524Gambusia_affinis
ENSMICG00000002050CSDE19974.777ENSGACG00000004544csde110077.500Gasterosteus_aculeatus
ENSMICG00000002050CSDE110090.533ENSGAGG00000017685CSDE110091.980Gopherus_agassizii
ENSMICG00000002050CSDE110098.401ENSGGOG00000002164CSDE110098.566Gorilla_gorilla
ENSMICG00000002050CSDE19677.445ENSHBUG00000020315csde110077.503Haplochromis_burtoni
ENSMICG00000002050CSDE19688.366ENSHGLG00000009620-10088.972Heterocephalus_glaber_female
ENSMICG00000002050CSDE19990.157ENSHGLG00000010039-10090.157Heterocephalus_glaber_female
ENSMICG00000002050CSDE19989.062ENSHGLG00000003829-10089.179Heterocephalus_glaber_female
ENSMICG00000002050CSDE19979.866ENSHGLG00000000650-9979.674Heterocephalus_glaber_female
ENSMICG00000002050CSDE19885.068ENSHGLG00000007471-9885.020Heterocephalus_glaber_female
ENSMICG00000002050CSDE19982.366ENSHGLG00000019549-10082.080Heterocephalus_glaber_female
ENSMICG00000002050CSDE19990.566ENSHGLG00000008555-9990.566Heterocephalus_glaber_female
ENSMICG00000002050CSDE19880.543ENSHGLG00100007287-9882.392Heterocephalus_glaber_male
ENSMICG00000002050CSDE19998.884ENSHGLG00100019438-10098.435Heterocephalus_glaber_male
ENSMICG00000002050CSDE19989.933ENSHGLG00100006910-10089.933Heterocephalus_glaber_male
ENSMICG00000002050CSDE19982.366ENSHGLG00100001846-10079.948Heterocephalus_glaber_male
ENSMICG00000002050CSDE18987.940ENSHGLG00100004195-10083.961Heterocephalus_glaber_male
ENSMICG00000002050CSDE19985.938ENSHGLG00100012072-10084.355Heterocephalus_glaber_male
ENSMICG00000002050CSDE19979.418ENSHGLG00100002245-9984.105Heterocephalus_glaber_male
ENSMICG00000002050CSDE19982.143ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSMICG00000002050CSDE19875.513ENSHCOG00000004158csde110076.593Hippocampus_comes
ENSMICG00000002050CSDE19676.333ENSIPUG00000000355csde110076.394Ictalurus_punctatus
ENSMICG00000002050CSDE18393.007ENSSTOG00000032722-9493.007Ictidomys_tridecemlineatus
ENSMICG00000002050CSDE19983.036ENSSTOG00000030994-10080.179Ictidomys_tridecemlineatus
ENSMICG00000002050CSDE19997.545ENSJJAG00000019571Csde110097.619Jaculus_jaculus
ENSMICG00000002050CSDE19875.149ENSKMAG00000005685csde110076.143Kryptolebias_marmoratus
ENSMICG00000002050CSDE19974.610ENSLBEG00000014770csde110077.662Labrus_bergylta
ENSMICG00000002050CSDE19778.960ENSLACG00000018452CSDE19679.172Latimeria_chalumnae
ENSMICG00000002050CSDE110077.700ENSLOCG00000010413csde19679.951Lepisosteus_oculatus
ENSMICG00000002050CSDE19996.429ENSLAFG00000007150CSDE19895.775Loxodonta_africana
ENSMICG00000002050CSDE110098.834ENSMFAG00000003674CSDE110098.837Macaca_fascicularis
ENSMICG00000002050CSDE110098.401ENSMMUG00000001974CSDE110098.837Macaca_mulatta
ENSMICG00000002050CSDE110098.834ENSMNEG00000045247CSDE110098.837Macaca_nemestrina
ENSMICG00000002050CSDE110098.155ENSMLEG00000038673CSDE110098.837Mandrillus_leucophaeus
ENSMICG00000002050CSDE19975.278ENSMAMG00000008821csde110078.312Mastacembelus_armatus
ENSMICG00000002050CSDE19875.718ENSMZEG00005021675csde110077.503Maylandia_zebra
ENSMICG00000002050CSDE19691.253ENSMGAG00000016381CSDE110091.276Meleagris_gallopavo
ENSMICG00000002050CSDE19998.214ENSMAUG00000014031Csde110097.904Mesocricetus_auratus
ENSMICG00000002050CSDE19998.214ENSMOCG00000018960Csde110097.914Microtus_ochrogaster
ENSMICG00000002050CSDE19677.474ENSMMOG00000015075csde110077.532Mola_mola
ENSMICG00000002050CSDE19995.312ENSMODG00000004685CSDE110095.489Monodelphis_domestica
ENSMICG00000002050CSDE19678.255ENSMALG00000007132csde110078.312Monopterus_albus
ENSMICG00000002050CSDE19997.768MGP_CAROLIEiJ_G0025444Csde110097.653Mus_caroli
ENSMICG00000002050CSDE19997.991ENSMUSG00000068823Csde110097.784Mus_musculus
ENSMICG00000002050CSDE19998.438MGP_PahariEiJ_G0026888Csde110098.044Mus_pahari
ENSMICG00000002050CSDE19998.438MGP_SPRETEiJ_G0026394Csde110098.044Mus_spretus
ENSMICG00000002050CSDE19699.076ENSMPUG00000005753CSDE19998.595Mustela_putorius_furo
ENSMICG00000002050CSDE110097.663ENSMLUG00000005681CSDE110097.663Myotis_lucifugus
ENSMICG00000002050CSDE19998.438ENSNGAG00000021929Csde110098.054Nannospalax_galili
ENSMICG00000002050CSDE19970.982ENSNGAG00000012599-10071.047Nannospalax_galili
ENSMICG00000002050CSDE19677.445ENSNBRG00000020808csde110077.503Neolamprologus_brichardi
ENSMICG00000002050CSDE110098.278ENSNLEG00000004842CSDE110098.278Nomascus_leucogenys
ENSMICG00000002050CSDE19695.381ENSMEUG00000002677CSDE19697.087Notamacropus_eugenii
ENSMICG00000002050CSDE19896.644ENSOPRG00000005002CSDE18894.246Ochotona_princeps
ENSMICG00000002050CSDE19967.627ENSODEG00000005979-9867.699Octodon_degus
ENSMICG00000002050CSDE19998.214ENSODEG00000007383-10098.204Octodon_degus
ENSMICG00000002050CSDE19974.165ENSONIG00000009309csde110075.214Oreochromis_niloticus
ENSMICG00000002050CSDE19579.177ENSOANG00000003346-10079.177Ornithorhynchus_anatinus
ENSMICG00000002050CSDE15075.000ENSOANG00000004518-10075.000Ornithorhynchus_anatinus
ENSMICG00000002050CSDE110097.512ENSOCUG00000016438CSDE110097.512Oryctolagus_cuniculus
ENSMICG00000002050CSDE19677.575ENSORLG00000000707csde110077.633Oryzias_latipes
ENSMICG00000002050CSDE19875.240ENSORLG00020005148csde110075.214Oryzias_latipes_hni
ENSMICG00000002050CSDE19677.575ENSORLG00015019415csde110077.633Oryzias_latipes_hsok
ENSMICG00000002050CSDE19975.278ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSMICG00000002050CSDE110098.770ENSOGAG00000012127CSDE110098.770Otolemur_garnettii
ENSMICG00000002050CSDE110098.032ENSOARG00000020034CSDE110098.032Ovis_aries
ENSMICG00000002050CSDE110098.401ENSPPAG00000025861CSDE110098.566Pan_paniscus
ENSMICG00000002050CSDE110098.647ENSPPRG00000006747CSDE110098.647Panthera_pardus
ENSMICG00000002050CSDE110098.647ENSPTIG00000015468CSDE110098.647Panthera_tigris_altaica
ENSMICG00000002050CSDE110098.278ENSPTRG00000033721CSDE110098.496Pan_troglodytes
ENSMICG00000002050CSDE110098.401ENSPANG00000018873CSDE110098.837Papio_anubis
ENSMICG00000002050CSDE19975.223ENSPKIG00000009459csde110077.373Paramormyrops_kingsleyae
ENSMICG00000002050CSDE19195.133ENSPSIG00000003823CSDE19695.133Pelodiscus_sinensis
ENSMICG00000002050CSDE19677.214ENSPMGG00000000772csde110077.273Periophthalmus_magnuspinnatus
ENSMICG00000002050CSDE19998.438ENSPEMG00000020357-10097.904Peromyscus_maniculatus_bairdii
ENSMICG00000002050CSDE19995.536ENSPCIG00000022587CSDE110095.614Phascolarctos_cinereus
ENSMICG00000002050CSDE19972.297ENSPFOG00000012664csde110075.776Poecilia_formosa
ENSMICG00000002050CSDE15679.104ENSPLAG00000004786-8476.812Poecilia_latipinna
ENSMICG00000002050CSDE19673.441ENSPLAG00000017680csde19373.441Poecilia_latipinna
ENSMICG00000002050CSDE19873.243ENSPMEG00000005094csde19673.243Poecilia_mexicana
ENSMICG00000002050CSDE15679.104ENSPMEG00000000768-9776.812Poecilia_mexicana
ENSMICG00000002050CSDE19874.733ENSPREG00000011631csde110073.950Poecilia_reticulata
ENSMICG00000002050CSDE19998.884ENSPPYG00000000996CSDE110098.371Pongo_abelii
ENSMICG00000002050CSDE110097.623ENSPCAG00000014368CSDE19697.623Procavia_capensis
ENSMICG00000002050CSDE110099.042ENSPCOG00000017893CSDE110099.123Propithecus_coquereli
ENSMICG00000002050CSDE18583.582ENSPCOG00000008223-9282.117Propithecus_coquereli
ENSMICG00000002050CSDE110092.128ENSPVAG00000008225CSDE110092.128Pteropus_vampyrus
ENSMICG00000002050CSDE19677.445ENSPNYG00000013745csde110077.503Pundamilia_nyererei
ENSMICG00000002050CSDE19875.542ENSPNAG00000001958csde110077.143Pygocentrus_nattereri
ENSMICG00000002050CSDE19998.438ENSRNOG00000061058Csde110097.870Rattus_norvegicus
ENSMICG00000002050CSDE110093.129ENSRBIG00000038966-10098.837Rhinopithecus_bieti
ENSMICG00000002050CSDE19997.321ENSRBIG00000038088-9997.387Rhinopithecus_bieti
ENSMICG00000002050CSDE110098.834ENSRROG00000043101CSDE110098.837Rhinopithecus_roxellana
ENSMICG00000002050CSDE110098.155ENSSBOG00000035592CSDE110098.155Saimiri_boliviensis_boliviensis
ENSMICG00000002050CSDE19995.312ENSSHAG00000009831CSDE110095.437Sarcophilus_harrisii
ENSMICG00000002050CSDE19974.388ENSSFOG00015007498csde110076.723Scleropages_formosus
ENSMICG00000002050CSDE19975.501ENSSMAG00000007203csde110078.182Scophthalmus_maximus
ENSMICG00000002050CSDE19974.833ENSSDUG00000015380csde110077.792Seriola_dumerili
ENSMICG00000002050CSDE19876.145ENSSLDG00000008819csde110077.792Seriola_lalandi_dorsalis
ENSMICG00000002050CSDE110096.437ENSSARG00000000738CSDE110096.437Sorex_araneus
ENSMICG00000002050CSDE110090.414ENSSPUG00000008714CSDE110091.479Sphenodon_punctatus
ENSMICG00000002050CSDE19975.801ENSSPAG00000000716csde110077.922Stegastes_partitus
ENSMICG00000002050CSDE110098.223ENSSSCG00000006752CSDE110098.435Sus_scrofa
ENSMICG00000002050CSDE110086.031ENSTGUG00000000972CSDE110090.500Taeniopygia_guttata
ENSMICG00000002050CSDE19674.576ENSTRUG00000007996csde110074.642Takifugu_rubripes
ENSMICG00000002050CSDE18881.749ENSTNIG00000010878csde110081.749Tetraodon_nigroviridis
ENSMICG00000002050CSDE19397.608ENSTBEG00000011880-6797.608Tupaia_belangeri
ENSMICG00000002050CSDE110097.540ENSTTRG00000015583CSDE110097.540Tursiops_truncatus
ENSMICG00000002050CSDE18897.802ENSUAMG00000021779-10096.785Ursus_americanus
ENSMICG00000002050CSDE18693.720ENSUAMG00000024289-9993.720Ursus_americanus
ENSMICG00000002050CSDE17281.395ENSUAMG00000021782-9781.395Ursus_americanus
ENSMICG00000002050CSDE19990.625ENSUMAG00000009720-9890.532Ursus_maritimus
ENSMICG00000002050CSDE19999.050ENSUMAG00000011714-9999.050Ursus_maritimus
ENSMICG00000002050CSDE17281.395ENSUMAG00000011713-9781.395Ursus_maritimus
ENSMICG00000002050CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSMICG00000002050CSDE18798.204ENSVVUG00000009890CSDE19498.099Vulpes_vulpes
ENSMICG00000002050CSDE19585.393ENSXETG00000021448csde110085.393Xenopus_tropicalis
ENSMICG00000002050CSDE18885.455ENSXCOG00000000035csde19985.455Xiphophorus_couchianus
ENSMICG00000002050CSDE19975.858ENSXMAG00000009080csde19877.851Xiphophorus_maculatus

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