EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000002315 (Gene tree)
Gene ID: 105869038
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 6246 bases
Position: chr26:7791772-7798017
Accession: 105869038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000002113	PseudoU_synth_2	PF00849.22	3.7e-19	1	1
ENSMICP00000047468	PseudoU_synth_2	PF00849.22	7.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000059056	RPUSD3-202	648	-	ENSMICP00000047468	215 (aa)	-	UPI000C2EC081
ENSMICT00000002313	RPUSD3-201	1332	XM_012760576	ENSMICP00000002113	344 (aa)	XP_012616030	UPI0006432262

Gene Model

Click here to download ENSMICG00000002315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000002315's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000002315	RPUSD3	100	81.977	ENSG00000156990	RPUSD3	99	82.938	Homo_sapiens
ENSMICG00000002315	RPUSD3	100	78.779	ENSAMEG00000016227	RPUSD3	98	78.779	Ailuropoda_melanoleuca
ENSMICG00000002315	RPUSD3	81	55.000	ENSACAG00000009836	RPUSD3	79	55.000	Anolis_carolinensis
ENSMICG00000002315	RPUSD3	97	57.895	ENSANAG00000007127	-	98	57.895	Aotus_nancymaae
ENSMICG00000002315	RPUSD3	90	81.443	ENSANAG00000019945	-	79	80.808	Aotus_nancymaae
ENSMICG00000002315	RPUSD3	87	81.183	ENSANAG00000038118	-	90	80.423	Aotus_nancymaae
ENSMICG00000002315	RPUSD3	100	76.163	ENSBTAG00000007968	RPUSD3	100	76.163	Bos_taurus
ENSMICG00000002315	RPUSD3	100	76.163	ENSCAFG00000029733	RPUSD3	98	76.163	Canis_familiaris
ENSMICG00000002315	RPUSD3	100	76.163	ENSCAFG00020008582	RPUSD3	98	76.163	Canis_lupus_dingo
ENSMICG00000002315	RPUSD3	100	75.872	ENSCHIG00000026027	RPUSD3	100	75.872	Capra_hircus
ENSMICG00000002315	RPUSD3	100	75.575	ENSTSYG00000009994	RPUSD3	99	75.575	Carlito_syrichta
ENSMICG00000002315	RPUSD3	76	81.369	ENSCAPG00000017559	RPUSD3	99	81.369	Cavia_aperea
ENSMICG00000002315	RPUSD3	77	81.061	ENSCPOG00000037956	RPUSD3	85	76.080	Cavia_porcellus
ENSMICG00000002315	RPUSD3	100	79.651	ENSCCAG00000029530	RPUSD3	99	81.517	Cebus_capucinus
ENSMICG00000002315	RPUSD3	100	81.105	ENSCATG00000036939	RPUSD3	99	82.464	Cercocebus_atys
ENSMICG00000002315	RPUSD3	100	81.105	ENSCSAG00000010506	RPUSD3	98	81.105	Chlorocebus_sabaeus
ENSMICG00000002315	RPUSD3	52	83.929	ENSCHOG00000010151	-	67	83.929	Choloepus_hoffmanni
ENSMICG00000002315	RPUSD3	74	53.307	ENSCPBG00000008825	RPUSD3	95	54.264	Chrysemys_picta_bellii
ENSMICG00000002315	RPUSD3	100	81.977	ENSCANG00000040711	RPUSD3	99	82.938	Colobus_angolensis_palliatus
ENSMICG00000002315	RPUSD3	97	71.988	ENSCGRG00001004923	Rpusd3	93	71.343	Cricetulus_griseus_chok1gshd
ENSMICG00000002315	RPUSD3	97	71.988	ENSCGRG00000018315	Rpusd3	97	71.988	Cricetulus_griseus_crigri
ENSMICG00000002315	RPUSD3	99	73.469	ENSDNOG00000039160	RPUSD3	91	73.469	Dasypus_novemcinctus
ENSMICG00000002315	RPUSD3	76	78.491	ENSDORG00000026827	Rpusd3	92	78.491	Dipodomys_ordii
ENSMICG00000002315	RPUSD3	100	71.512	ENSETEG00000006538	RPUSD3	97	71.512	Echinops_telfairi
ENSMICG00000002315	RPUSD3	80	35.632	ENSEBUG00000015605	RPUSD3	84	35.094	Eptatretus_burgeri
ENSMICG00000002315	RPUSD3	100	79.360	ENSEASG00005014160	RPUSD3	96	79.360	Equus_asinus_asinus
ENSMICG00000002315	RPUSD3	100	80.233	ENSECAG00000019988	RPUSD3	96	80.233	Equus_caballus
ENSMICG00000002315	RPUSD3	97	58.580	ENSEEUG00000007353	RPUSD3	95	58.284	Erinaceus_europaeus
ENSMICG00000002315	RPUSD3	100	77.457	ENSFCAG00000014199	RPUSD3	98	77.457	Felis_catus
ENSMICG00000002315	RPUSD3	79	49.270	ENSFALG00000012968	RPUSD3	99	49.084	Ficedula_albicollis
ENSMICG00000002315	RPUSD3	77	81.132	ENSFDAG00000008350	RPUSD3	90	75.850	Fukomys_damarensis
ENSMICG00000002315	RPUSD3	76	53.992	ENSGAGG00000007493	RPUSD3	82	54.924	Gopherus_agassizii
ENSMICG00000002315	RPUSD3	100	81.977	ENSGGOG00000013120	RPUSD3	99	83.412	Gorilla_gorilla
ENSMICG00000002315	RPUSD3	81	79.643	ENSHGLG00000011722	RPUSD3	72	79.643	Heterocephalus_glaber_female
ENSMICG00000002315	RPUSD3	81	79.643	ENSHGLG00100016038	RPUSD3	72	79.643	Heterocephalus_glaber_male
ENSMICG00000002315	RPUSD3	100	75.291	ENSSTOG00000002125	RPUSD3	98	75.291	Ictidomys_tridecemlineatus
ENSMICG00000002315	RPUSD3	97	70.206	ENSJJAG00000012679	Rpusd3	99	70.206	Jaculus_jaculus
ENSMICG00000002315	RPUSD3	100	77.326	ENSLAFG00000017501	RPUSD3	100	77.326	Loxodonta_africana
ENSMICG00000002315	RPUSD3	100	81.105	ENSMFAG00000032407	RPUSD3	98	81.105	Macaca_fascicularis
ENSMICG00000002315	RPUSD3	97	80.861	ENSMMUG00000010628	RPUSD3	97	84.295	Macaca_mulatta
ENSMICG00000002315	RPUSD3	100	80.814	ENSMNEG00000040308	RPUSD3	98	80.814	Macaca_nemestrina
ENSMICG00000002315	RPUSD3	100	81.395	ENSMLEG00000033940	RPUSD3	99	82.938	Mandrillus_leucophaeus
ENSMICG00000002315	RPUSD3	96	74.018	ENSMAUG00000015473	Rpusd3	96	74.018	Mesocricetus_auratus
ENSMICG00000002315	RPUSD3	96	71.903	ENSMOCG00000022613	Rpusd3	96	71.903	Microtus_ochrogaster
ENSMICG00000002315	RPUSD3	96	57.075	ENSMODG00000005210	RPUSD3	76	62.976	Monodelphis_domestica
ENSMICG00000002315	RPUSD3	99	71.386	MGP_CAROLIEiJ_G0028725	Rpusd3	99	71.386	Mus_caroli
ENSMICG00000002315	RPUSD3	99	71.976	ENSMUSG00000051169	Rpusd3	100	71.221	Mus_musculus
ENSMICG00000002315	RPUSD3	100	71.512	MGP_PahariEiJ_G0022476	Rpusd3	100	71.512	Mus_pahari
ENSMICG00000002315	RPUSD3	99	71.681	MGP_SPRETEiJ_G0029753	Rpusd3	100	70.930	Mus_spretus
ENSMICG00000002315	RPUSD3	99	77.126	ENSMPUG00000017132	RPUSD3	96	77.126	Mustela_putorius_furo
ENSMICG00000002315	RPUSD3	100	80.233	ENSMLUG00000006135	RPUSD3	99	80.233	Myotis_lucifugus
ENSMICG00000002315	RPUSD3	97	71.687	ENSNGAG00000023704	Rpusd3	97	71.687	Nannospalax_galili
ENSMICG00000002315	RPUSD3	98	82.938	ENSNLEG00000004214	RPUSD3	99	82.938	Nomascus_leucogenys
ENSMICG00000002315	RPUSD3	76	67.050	ENSMEUG00000013098	-	100	67.050	Notamacropus_eugenii
ENSMICG00000002315	RPUSD3	97	61.538	ENSOPRG00000002300	RPUSD3	96	61.538	Ochotona_princeps
ENSMICG00000002315	RPUSD3	77	79.167	ENSODEG00000018137	RPUSD3	91	79.167	Octodon_degus
ENSMICG00000002315	RPUSD3	82	52.542	ENSOANG00000012081	-	99	51.228	Ornithorhynchus_anatinus
ENSMICG00000002315	RPUSD3	91	76.382	ENSOCUG00000027885	RPUSD3	100	65.429	Oryctolagus_cuniculus
ENSMICG00000002315	RPUSD3	94	83.744	ENSOGAG00000012592	RPUSD3	100	83.121	Otolemur_garnettii
ENSMICG00000002315	RPUSD3	100	77.035	ENSOARG00000005928	RPUSD3	98	77.035	Ovis_aries
ENSMICG00000002315	RPUSD3	99	82.111	ENSPPAG00000038083	RPUSD3	97	83.981	Pan_paniscus
ENSMICG00000002315	RPUSD3	100	77.457	ENSPPRG00000024433	RPUSD3	98	77.457	Panthera_pardus
ENSMICG00000002315	RPUSD3	100	78.613	ENSPTIG00000006828	RPUSD3	100	78.613	Panthera_tigris_altaica
ENSMICG00000002315	RPUSD3	98	83.412	ENSPTRG00000051760	RPUSD3	99	83.412	Pan_troglodytes
ENSMICG00000002315	RPUSD3	100	81.395	ENSPANG00000023885	RPUSD3	99	82.938	Papio_anubis
ENSMICG00000002315	RPUSD3	100	70.930	ENSPEMG00000017245	Rpusd3	100	70.930	Peromyscus_maniculatus_bairdii
ENSMICG00000002315	RPUSD3	96	62.319	ENSPCIG00000021901	RPUSD3	98	59.064	Phascolarctos_cinereus
ENSMICG00000002315	RPUSD3	99	82.698	ENSPPYG00000013676	RPUSD3	97	82.698	Pongo_abelii
ENSMICG00000002315	RPUSD3	94	55.941	ENSPCAG00000013731	-	97	59.075	Procavia_capensis
ENSMICG00000002315	RPUSD3	100	90.116	ENSPCOG00000018314	RPUSD3	98	90.116	Propithecus_coquereli
ENSMICG00000002315	RPUSD3	100	76.744	ENSPVAG00000011107	RPUSD3	98	76.744	Pteropus_vampyrus
ENSMICG00000002315	RPUSD3	96	67.976	ENSRNOG00000009084	Rpusd3	96	67.976	Rattus_norvegicus
ENSMICG00000002315	RPUSD3	98	83.886	ENSRBIG00000041230	RPUSD3	99	83.886	Rhinopithecus_bieti
ENSMICG00000002315	RPUSD3	98	83.886	ENSRROG00000043328	RPUSD3	99	83.886	Rhinopithecus_roxellana
ENSMICG00000002315	RPUSD3	100	78.488	ENSSBOG00000036106	RPUSD3	98	78.488	Saimiri_boliviensis_boliviensis
ENSMICG00000002315	RPUSD3	94	57.921	ENSSHAG00000015536	RPUSD3	99	59.871	Sarcophilus_harrisii
ENSMICG00000002315	RPUSD3	100	78.779	ENSSSCG00000011555	RPUSD3	98	78.779	Sus_scrofa
ENSMICG00000002315	RPUSD3	72	47.097	ENSTGUG00000008744	RPUSD3	93	50.230	Taeniopygia_guttata
ENSMICG00000002315	RPUSD3	93	79.104	ENSTBEG00000000176	RPUSD3	97	75.801	Tupaia_belangeri
ENSMICG00000002315	RPUSD3	100	76.744	ENSTTRG00000007544	RPUSD3	98	76.744	Tursiops_truncatus
ENSMICG00000002315	RPUSD3	94	80.788	ENSUAMG00000011354	RPUSD3	98	81.210	Ursus_americanus
ENSMICG00000002315	RPUSD3	99	79.056	ENSUMAG00000018830	RPUSD3	96	79.056	Ursus_maritimus
ENSMICG00000002315	RPUSD3	100	77.616	ENSVVUG00000023735	RPUSD3	100	77.616	Vulpes_vulpes
ENSMICG00000002315	RPUSD3	81	48.399	ENSXETG00000023546	rpusd3	99	48.399	Xenopus_tropicalis