EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMICG00000002363 (Gene tree)
Gene ID
105882943
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Minus strand
Length
59099 bases
Position
chr8:152013340-152072438
Accession
105882943
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000002166CPSF73-100_CPF11718.82.6e-3712
ENSMICP00000002166CPSF73-100_CPF11718.82.6e-3722
ENSMICP00000036883CPSF73-100_CPF11718.83.2e-3712
ENSMICP00000036883CPSF73-100_CPF11718.83.2e-3722
ENSMICP00000022650CPSF73-100_CPF11718.83.5e-3711
ENSMICP00000002166Beta-CaspPF10996.85.9e-3411
ENSMICP00000036883Beta-CaspPF10996.86.7e-3411
ENSMICP00000022650Beta-CaspPF10996.87e-3411
ENSMICP00000036883Lactamase_BPF00753.271.2e-1811
ENSMICP00000022650Lactamase_BPF00753.271.2e-1811
ENSMICP00000002166Lactamase_BPF00753.278.1e-1411
ENSMICP00000002166RMMBLPF07521.121.4e-2111
ENSMICP00000036883RMMBLPF07521.121.6e-2111
ENSMICP00000022650RMMBLPF07521.121.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000002370CPSF3-2031839-ENSMICP00000002166612 (aa)-UPI000C2EA5E9
ENSMICT00000049438CPSF3-2011992XM_012785704ENSMICP00000022650663 (aa)XP_012641158UPI000C2EC127
ENSMICT00000049191CPSF3-2021971-ENSMICP00000036883656 (aa)-UPI00085B3791
Gene Model
Click here to download ENSMICG00000002363's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000002363's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMICG00000002363CPSF35754.054ENSMICG00000014186INTS117654.054
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000002363CPSF310094.006ENSG00000119203CPSF3100100.000Homo_sapiens
ENSMICG00000002363CPSF39980.617ENSAPOG00000022087cpsf39880.617Acanthochromis_polyacanthus
ENSMICG00000002363CPSF37593.988ENSAPOG00000012241CPSF39093.964Acanthochromis_polyacanthus
ENSMICG00000002363CPSF310094.152ENSAMEG00000008493CPSF310094.152Ailuropoda_melanoleuca
ENSMICG00000002363CPSF39881.270ENSACIG00000023663CPSF39981.270Amphilophus_citrinellus
ENSMICG00000002363CPSF39877.971ENSACIG00000009846cpsf39977.971Amphilophus_citrinellus
ENSMICG00000002363CPSF39980.617ENSAOCG00000022056cpsf39386.078Amphiprion_ocellaris
ENSMICG00000002363CPSF39983.063ENSAOCG00000010077CPSF39883.063Amphiprion_ocellaris
ENSMICG00000002363CPSF39980.764ENSAPEG00000019526cpsf39880.764Amphiprion_percula
ENSMICG00000002363CPSF39983.063ENSAPEG00000021167CPSF39883.063Amphiprion_percula
ENSMICG00000002363CPSF39978.529ENSATEG00000014525CPSF39878.529Anabas_testudineus
ENSMICG00000002363CPSF39980.764ENSATEG00000003959cpsf39880.764Anabas_testudineus
ENSMICG00000002363CPSF310090.000ENSAPLG00000006941CPSF39890.179Anas_platyrhynchos
ENSMICG00000002363CPSF39987.087ENSACAG00000001759CPSF39987.087Anolis_carolinensis
ENSMICG00000002363CPSF310089.217ENSANAG00000031254CPSF310089.217Aotus_nancymaae
ENSMICG00000002363CPSF39980.156ENSACLG00000014484cpsf39981.109Astatotilapia_calliptera
ENSMICG00000002363CPSF39881.111ENSACLG00000018846CPSF39981.111Astatotilapia_calliptera
ENSMICG00000002363CPSF39983.578ENSAMXG00000004786cpsf39883.578Astyanax_mexicanus
ENSMICG00000002363CPSF310094.006ENSBTAG00000019735CPSF310094.006Bos_taurus
ENSMICG00000002363CPSF38460.739WBGene00013460cpsf-38060.739Caenorhabditis_elegans
ENSMICG00000002363CPSF310093.860ENSCJAG00000006276CPSF310093.860Callithrix_jacchus
ENSMICG00000002363CPSF310094.152ENSCAFG00000003375CPSF39594.152Canis_familiaris
ENSMICG00000002363CPSF39093.700ENSCAFG00020026799CPSF310093.700Canis_lupus_dingo
ENSMICG00000002363CPSF310094.006ENSCHIG00000013973CPSF310094.006Capra_hircus
ENSMICG00000002363CPSF310093.860ENSTSYG00000002967CPSF310093.860Carlito_syrichta
ENSMICG00000002363CPSF310091.875ENSCAPG00000013851CPSF310092.354Cavia_aperea
ENSMICG00000002363CPSF310092.544ENSCPOG00000011299CPSF310092.544Cavia_porcellus
ENSMICG00000002363CPSF310093.713ENSCCAG00000036730CPSF310093.713Cebus_capucinus
ENSMICG00000002363CPSF310094.162ENSCATG00000014770CPSF310094.162Cercocebus_atys
ENSMICG00000002363CPSF310092.398ENSCLAG00000002727CPSF310092.398Chinchilla_lanigera
ENSMICG00000002363CPSF310086.111ENSCSAG00000007125CPSF310086.111Chlorocebus_sabaeus
ENSMICG00000002363CPSF386100.000ENSCHOG00000000180CPSF38566.667Choloepus_hoffmanni
ENSMICG00000002363CPSF39990.469ENSCPBG00000014074CPSF39990.469Chrysemys_picta_bellii
ENSMICG00000002363CPSF39964.390ENSCING00000007214-9864.390Ciona_intestinalis
ENSMICG00000002363CPSF310085.457ENSCANG00000034435CPSF310085.457Colobus_angolensis_palliatus
ENSMICG00000002363CPSF310093.275ENSCGRG00001013134Cpsf310093.275Cricetulus_griseus_chok1gshd
ENSMICG00000002363CPSF310093.275ENSCGRG00000018319Cpsf310093.275Cricetulus_griseus_crigri
ENSMICG00000002363CPSF39981.765ENSCSEG00000002021CPSF39981.269Cynoglossus_semilaevis
ENSMICG00000002363CPSF39983.358ENSCVAG00000015067CPSF39883.358Cyprinodon_variegatus
ENSMICG00000002363CPSF39984.164ENSDARG00000027649cpsf39884.164Danio_rerio
ENSMICG00000002363CPSF310092.117ENSDNOG00000008940CPSF39592.117Dasypus_novemcinctus
ENSMICG00000002363CPSF39593.088ENSDORG00000014263Cpsf310093.088Dipodomys_ordii
ENSMICG00000002363CPSF39964.559FBgn0261065Cpsf739864.559Drosophila_melanogaster
ENSMICG00000002363CPSF38891.542ENSETEG00000003893CPSF39191.542Echinops_telfairi
ENSMICG00000002363CPSF39974.069ENSEBUG00000009018cpsf39874.212Eptatretus_burgeri
ENSMICG00000002363CPSF310094.152ENSEASG00005003970CPSF310094.152Equus_asinus_asinus
ENSMICG00000002363CPSF310094.152ENSECAG00000019911CPSF310094.152Equus_caballus
ENSMICG00000002363CPSF310078.624ENSEEUG00000015422CPSF310078.624Erinaceus_europaeus
ENSMICG00000002363CPSF39982.991ENSELUG00000013775cpsf39882.991Esox_lucius
ENSMICG00000002363CPSF310094.006ENSFCAG00000007852CPSF310094.006Felis_catus
ENSMICG00000002363CPSF310089.531ENSFALG00000006572CPSF310089.799Ficedula_albicollis
ENSMICG00000002363CPSF39991.935ENSFDAG00000006317CPSF39991.935Fukomys_damarensis
ENSMICG00000002363CPSF39980.323ENSFHEG00000014774cpsf39880.323Fundulus_heteroclitus
ENSMICG00000002363CPSF36364.059ENSFHEG00000012186CPSF39964.059Fundulus_heteroclitus
ENSMICG00000002363CPSF39981.525ENSGMOG00000003157cpsf39881.525Gadus_morhua
ENSMICG00000002363CPSF310089.219ENSGALG00000016424CPSF39990.015Gallus_gallus
ENSMICG00000002363CPSF39877.373ENSGAFG00000019449cpsf39977.373Gambusia_affinis
ENSMICG00000002363CPSF39983.186ENSGAFG00000008016CPSF39883.186Gambusia_affinis
ENSMICG00000002363CPSF37389.722ENSGAGG00000025583CPSF39389.722Gopherus_agassizii
ENSMICG00000002363CPSF39993.543ENSGGOG00000001757CPSF310093.543Gorilla_gorilla
ENSMICG00000002363CPSF39981.113ENSHBUG00000001188cpsf39981.113Haplochromis_burtoni
ENSMICG00000002363CPSF36377.037ENSHBUG00000014332CPSF39977.037Haplochromis_burtoni
ENSMICG00000002363CPSF310091.667ENSHGLG00000000666CPSF39991.667Heterocephalus_glaber_female
ENSMICG00000002363CPSF310091.667ENSHGLG00100007765CPSF39991.667Heterocephalus_glaber_male
ENSMICG00000002363CPSF39981.296ENSHCOG00000015957CPSF39781.296Hippocampus_comes
ENSMICG00000002363CPSF39980.117ENSHCOG00000007251cpsf39980.117Hippocampus_comes
ENSMICG00000002363CPSF39982.405ENSIPUG00000023488cpsf39882.405Ictalurus_punctatus
ENSMICG00000002363CPSF310093.567ENSSTOG00000004476CPSF310093.567Ictidomys_tridecemlineatus
ENSMICG00000002363CPSF310092.398ENSJJAG00000023415Cpsf310092.398Jaculus_jaculus
ENSMICG00000002363CPSF39979.619ENSKMAG00000002806cpsf39879.619Kryptolebias_marmoratus
ENSMICG00000002363CPSF39982.769ENSKMAG00000007317CPSF39882.769Kryptolebias_marmoratus
ENSMICG00000002363CPSF39584.105ENSLBEG00000013492CPSF39884.105Labrus_bergylta
ENSMICG00000002363CPSF35875.538ENSLBEG00000015018-9975.538Labrus_bergylta
ENSMICG00000002363CPSF39974.487ENSLBEG00000020569cpsf39474.487Labrus_bergylta
ENSMICG00000002363CPSF39979.234ENSLACG00000008308CPSF39879.234Latimeria_chalumnae
ENSMICG00000002363CPSF39983.994ENSLOCG00000016823cpsf39883.994Lepisosteus_oculatus
ENSMICG00000002363CPSF310092.812ENSLAFG00000009467CPSF310092.059Loxodonta_africana
ENSMICG00000002363CPSF310093.860ENSMFAG00000001339CPSF310093.860Macaca_fascicularis
ENSMICG00000002363CPSF310093.281ENSMMUG00000018038CPSF310093.509Macaca_mulatta
ENSMICG00000002363CPSF310081.875ENSMNEG00000039447CPSF310081.140Macaca_nemestrina
ENSMICG00000002363CPSF310094.006ENSMLEG00000026825CPSF310094.006Mandrillus_leucophaeus
ENSMICG00000002363CPSF39880.032ENSMAMG00000008835CPSF39980.032Mastacembelus_armatus
ENSMICG00000002363CPSF39980.910ENSMAMG00000003076cpsf39880.910Mastacembelus_armatus
ENSMICG00000002363CPSF39981.113ENSMZEG00005014358cpsf39981.113Maylandia_zebra
ENSMICG00000002363CPSF39983.505ENSMZEG00005006258CPSF39883.505Maylandia_zebra
ENSMICG00000002363CPSF310089.375ENSMGAG00000013995CPSF310089.955Meleagris_gallopavo
ENSMICG00000002363CPSF35891.489ENSMAUG00000000166Cpsf310091.489Mesocricetus_auratus
ENSMICG00000002363CPSF310088.743ENSMOCG00000020067Cpsf310088.743Microtus_ochrogaster
ENSMICG00000002363CPSF37772.500ENSMMOG00000011923CPSF38472.500Mola_mola
ENSMICG00000002363CPSF39977.673ENSMMOG00000018212CPSF39878.072Mola_mola
ENSMICG00000002363CPSF310090.738ENSMODG00000014703CPSF310090.738Monodelphis_domestica
ENSMICG00000002363CPSF39978.281ENSMALG00000011474CPSF39978.281Monopterus_albus
ENSMICG00000002363CPSF39981.113ENSMALG00000016416cpsf39981.113Monopterus_albus
ENSMICG00000002363CPSF310092.982MGP_CAROLIEiJ_G0017640Cpsf310092.982Mus_caroli
ENSMICG00000002363CPSF310092.982ENSMUSG00000054309Cpsf310092.982Mus_musculus
ENSMICG00000002363CPSF310092.836MGP_PahariEiJ_G0029397Cpsf310092.836Mus_pahari
ENSMICG00000002363CPSF310092.982MGP_SPRETEiJ_G0018481Cpsf310092.982Mus_spretus
ENSMICG00000002363CPSF310093.567ENSMPUG00000013213CPSF310093.567Mustela_putorius_furo
ENSMICG00000002363CPSF310093.139ENSMLUG00000010636CPSF310093.139Myotis_lucifugus
ENSMICG00000002363CPSF310093.129ENSNGAG00000019836Cpsf310093.129Nannospalax_galili
ENSMICG00000002363CPSF39881.111ENSNBRG00000010525CPSF39981.111Neolamprologus_brichardi
ENSMICG00000002363CPSF39980.673ENSNBRG00000004770cpsf39980.673Neolamprologus_brichardi
ENSMICG00000002363CPSF310093.860ENSNLEG00000013359CPSF310093.860Nomascus_leucogenys
ENSMICG00000002363CPSF310060.469ENSMEUG00000013117-10060.088Notamacropus_eugenii
ENSMICG00000002363CPSF310084.357ENSOPRG00000008902CPSF310084.357Ochotona_princeps
ENSMICG00000002363CPSF310092.105ENSODEG00000003129CPSF310092.105Octodon_degus
ENSMICG00000002363CPSF39981.259ENSONIG00000018812cpsf39981.259Oreochromis_niloticus
ENSMICG00000002363CPSF38889.716ENSOANG00000008577CPSF310089.716Ornithorhynchus_anatinus
ENSMICG00000002363CPSF310093.567ENSOCUG00000003728CPSF310093.567Oryctolagus_cuniculus
ENSMICG00000002363CPSF39979.063ENSORLG00000018854cpsf39979.063Oryzias_latipes
ENSMICG00000002363CPSF39979.063ENSORLG00020013331cpsf39979.063Oryzias_latipes_hni
ENSMICG00000002363CPSF39979.063ENSORLG00015011017cpsf39979.063Oryzias_latipes_hsok
ENSMICG00000002363CPSF39979.209ENSOMEG00000010647cpsf39479.209Oryzias_melastigma
ENSMICG00000002363CPSF310083.918ENSOGAG00000001680CPSF310083.918Otolemur_garnettii
ENSMICG00000002363CPSF310094.006ENSOARG00000015073CPSF310094.006Ovis_aries
ENSMICG00000002363CPSF310094.006ENSPPAG00000042457CPSF310094.006Pan_paniscus
ENSMICG00000002363CPSF310093.713ENSPPRG00000016790CPSF310093.713Panthera_pardus
ENSMICG00000002363CPSF310093.125ENSPTIG00000003920CPSF310093.228Panthera_tigris_altaica
ENSMICG00000002363CPSF310094.006ENSPTRG00000011638CPSF310094.006Pan_troglodytes
ENSMICG00000002363CPSF310093.713ENSPANG00000016798CPSF310093.713Papio_anubis
ENSMICG00000002363CPSF39984.536ENSPKIG00000023646cpsf39984.006Paramormyrops_kingsleyae
ENSMICG00000002363CPSF310088.906ENSPSIG00000016144CPSF310088.726Pelodiscus_sinensis
ENSMICG00000002363CPSF36375.000ENSPMGG00000015311CPSF39975.000Periophthalmus_magnuspinnatus
ENSMICG00000002363CPSF39876.221ENSPMGG00000006141-9283.829Periophthalmus_magnuspinnatus
ENSMICG00000002363CPSF310092.836ENSPEMG00000017668Cpsf310092.836Peromyscus_maniculatus_bairdii
ENSMICG00000002363CPSF38087.523ENSPMAG00000004841cpsf39987.523Petromyzon_marinus
ENSMICG00000002363CPSF310091.562ENSPCIG00000009823CPSF39892.054Phascolarctos_cinereus
ENSMICG00000002363CPSF39983.038ENSPFOG00000010418-9883.038Poecilia_formosa
ENSMICG00000002363CPSF39979.825ENSPFOG00000015922cpsf39979.825Poecilia_formosa
ENSMICG00000002363CPSF39979.825ENSPLAG00000000882cpsf39979.825Poecilia_latipinna
ENSMICG00000002363CPSF36376.427ENSPLAG00000021300-9976.427Poecilia_latipinna
ENSMICG00000002363CPSF39979.971ENSPMEG00000018309cpsf39979.971Poecilia_mexicana
ENSMICG00000002363CPSF39877.813ENSPREG00000014875cpsf39977.813Poecilia_reticulata
ENSMICG00000002363CPSF39982.905ENSPREG00000004482CPSF39882.905Poecilia_reticulata
ENSMICG00000002363CPSF310089.474ENSPPYG00000012666CPSF310089.474Pongo_abelii
ENSMICG00000002363CPSF38890.909ENSPCAG00000015042CPSF39090.909Procavia_capensis
ENSMICG00000002363CPSF38786.170ENSPCOG00000023016CPSF39886.170Propithecus_coquereli
ENSMICG00000002363CPSF39993.695ENSPVAG00000005324CPSF39993.695Pteropus_vampyrus
ENSMICG00000002363CPSF39981.113ENSPNYG00000004405cpsf39981.113Pundamilia_nyererei
ENSMICG00000002363CPSF38485.451ENSPNYG00000021047CPSF39185.451Pundamilia_nyererei
ENSMICG00000002363CPSF39982.991ENSPNAG00000023060cpsf39882.991Pygocentrus_nattereri
ENSMICG00000002363CPSF39992.962ENSRNOG00000052418Cpsf39992.962Rattus_norvegicus
ENSMICG00000002363CPSF310088.906ENSRBIG00000041615CPSF39989.026Rhinopithecus_bieti
ENSMICG00000002363CPSF310094.006ENSRROG00000033792CPSF310094.006Rhinopithecus_roxellana
ENSMICG00000002363CPSF38043.772YLR277CYSH17544.746Saccharomyces_cerevisiae
ENSMICG00000002363CPSF310088.665ENSSBOG00000027263CPSF310087.681Saimiri_boliviensis_boliviensis
ENSMICG00000002363CPSF310092.398ENSSHAG00000007024CPSF310092.398Sarcophilus_harrisii
ENSMICG00000002363CPSF39984.559ENSSFOG00015002108cpsf39984.559Scleropages_formosus
ENSMICG00000002363CPSF39582.689ENSSMAG00000020534CPSF39582.689Scophthalmus_maximus
ENSMICG00000002363CPSF39980.966ENSSDUG00000002828cpsf39680.966Seriola_dumerili
ENSMICG00000002363CPSF39983.211ENSSDUG00000018498CPSF39883.211Seriola_dumerili
ENSMICG00000002363CPSF39983.211ENSSLDG00000005234CPSF39883.211Seriola_lalandi_dorsalis
ENSMICG00000002363CPSF39980.966ENSSLDG00000008469cpsf39680.966Seriola_lalandi_dorsalis
ENSMICG00000002363CPSF39395.455ENSSARG00000005186CPSF39195.455Sorex_araneus
ENSMICG00000002363CPSF310086.801ENSSPUG00000015525CPSF39787.481Sphenodon_punctatus
ENSMICG00000002363CPSF39982.916ENSSPAG00000002906CPSF39882.916Stegastes_partitus
ENSMICG00000002363CPSF39980.764ENSSPAG00000018579cpsf39880.764Stegastes_partitus
ENSMICG00000002363CPSF39994.143ENSSSCG00000020799CPSF39994.143Sus_scrofa
ENSMICG00000002363CPSF310089.375ENSTGUG00000013016CPSF39990.162Taeniopygia_guttata
ENSMICG00000002363CPSF39980.645ENSTRUG00000007030cpsf39780.645Takifugu_rubripes
ENSMICG00000002363CPSF36368.550ENSTRUG00000013905CPSF39968.550Takifugu_rubripes
ENSMICG00000002363CPSF38589.041ENSTBEG00000002707CPSF38589.041Tupaia_belangeri
ENSMICG00000002363CPSF379100.000ENSTTRG00000000861CPSF378100.000Tursiops_truncatus
ENSMICG00000002363CPSF39991.056ENSUAMG00000007535CPSF39891.056Ursus_americanus
ENSMICG00000002363CPSF310093.594ENSUMAG00000003676CPSF310093.818Ursus_maritimus
ENSMICG00000002363CPSF39589.127ENSVPAG00000008041CPSF310089.748Vicugna_pacos
ENSMICG00000002363CPSF310094.152ENSVVUG00000002194CPSF310094.152Vulpes_vulpes
ENSMICG00000002363CPSF39985.169ENSXETG00000008263cpsf39885.169Xenopus_tropicalis
ENSMICG00000002363CPSF35874.324ENSXCOG00000000957-8774.324Xiphophorus_couchianus
ENSMICG00000002363CPSF39980.292ENSXCOG00000019695cpsf39980.292Xiphophorus_couchianus
ENSMICG00000002363CPSF39983.038ENSXMAG00000027291CPSF39883.038Xiphophorus_maculatus
ENSMICG00000002363CPSF39979.971ENSXMAG00000009784cpsf39979.971Xiphophorus_maculatus

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