EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000002497 (Gene tree)
Gene ID: 105869803
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 47570 bases
Position: chr2:110639699-110687268
Accession: 105869803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000002281	ResIII	PF04851.15	8.8e-11	1	1
ENSMICP00000040911	ResIII	PF04851.15	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000066004	CHD1L-204	639	-	ENSMICP00000040911	212 (aa)	-	UPI000C2EAFB5
ENSMICT00000037135	CHD1L-203	2397	XM_012761895	ENSMICP00000039028	798 (aa)	XP_012617349	UPI00085AF131
ENSMICT00000002497	CHD1L-201	2958	XM_012761894	ENSMICP00000002281	900 (aa)	XP_012617348	UPI000643D178
ENSMICT00000044389	CHD1L-202	2091	-	ENSMICP00000026471	696 (aa)	-	UPI00085B2FBC

Gene Model

Click here to download ENSMICG00000002497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000002497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000002497	CHD1L	87	41.969	ENSMICG00000015768	SMARCA1	54	43.433
ENSMICG00000002497	CHD1L	88	31.776	ENSMICG00000029160	ERCC6L2	61	48.000
ENSMICG00000002497	CHD1L	85	32.323	ENSMICG00000003266	RAD54L	68	30.409
ENSMICG00000002497	CHD1L	99	37.963	ENSMICG00000009746	SMARCAD1	51	35.429
ENSMICG00000002497	CHD1L	79	38.122	ENSMICG00000046554	-	95	36.833
ENSMICG00000002497	CHD1L	87	42.188	ENSMICG00000003971	SMARCA5	57	42.957
ENSMICG00000002497	CHD1L	89	41.837	ENSMICG00000016641	CHD6	68	41.842
ENSMICG00000002497	CHD1L	86	33.503	ENSMICG00000000754	-	57	31.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000002497	CHD1L	100	91.889	ENSG00000131778	CHD1L	100	93.193	Homo_sapiens
ENSMICG00000002497	CHD1L	96	64.524	ENSAPOG00000001539	chd1l	99	64.719	Acanthochromis_polyacanthus
ENSMICG00000002497	CHD1L	100	90.889	ENSAMEG00000017063	CHD1L	99	91.535	Ailuropoda_melanoleuca
ENSMICG00000002497	CHD1L	94	65.925	ENSACIG00000001164	chd1l	97	66.161	Amphilophus_citrinellus
ENSMICG00000002497	CHD1L	96	64.212	ENSAOCG00000014510	chd1l	86	64.787	Amphiprion_ocellaris
ENSMICG00000002497	CHD1L	96	62.085	ENSAPEG00000017450	chd1l	95	62.688	Amphiprion_percula
ENSMICG00000002497	CHD1L	96	62.486	ENSAPEG00000017573	chd1l	95	62.601	Amphiprion_percula
ENSMICG00000002497	CHD1L	97	65.103	ENSATEG00000013058	chd1l	92	65.621	Anabas_testudineus
ENSMICG00000002497	CHD1L	94	75.030	ENSAPLG00000009976	CHD1L	94	75.385	Anas_platyrhynchos
ENSMICG00000002497	CHD1L	97	68.645	ENSACAG00000017686	CHD1L	98	68.645	Anolis_carolinensis
ENSMICG00000002497	CHD1L	99	91.212	ENSANAG00000024347	CHD1L	99	91.212	Aotus_nancymaae
ENSMICG00000002497	CHD1L	96	65.108	ENSACLG00000019304	chd1l	96	64.335	Astatotilapia_calliptera
ENSMICG00000002497	CHD1L	98	59.865	ENSAMXG00000012367	chd1l	86	60.460	Astyanax_mexicanus
ENSMICG00000002497	CHD1L	99	90.323	ENSBTAG00000020831	CHD1L	98	90.745	Bos_taurus
ENSMICG00000002497	CHD1L	99	91.081	ENSCJAG00000002406	CHD1L	99	91.081	Callithrix_jacchus
ENSMICG00000002497	CHD1L	100	86.696	ENSCAFG00000010944	CHD1L	99	87.050	Canis_familiaris
ENSMICG00000002497	CHD1L	99	89.075	ENSCAFG00020020121	CHD1L	98	89.468	Canis_lupus_dingo
ENSMICG00000002497	CHD1L	99	89.721	ENSCHIG00000013871	CHD1L	99	90.068	Capra_hircus
ENSMICG00000002497	CHD1L	95	93.318	ENSTSYG00000003005	CHD1L	100	93.318	Carlito_syrichta
ENSMICG00000002497	CHD1L	99	88.517	ENSCPOG00000009000	CHD1L	98	88.977	Cavia_porcellus
ENSMICG00000002497	CHD1L	99	87.960	ENSCCAG00000036079	CHD1L	99	87.960	Cebus_capucinus
ENSMICG00000002497	CHD1L	100	92.000	ENSCATG00000031044	CHD1L	100	92.000	Cercocebus_atys
ENSMICG00000002497	CHD1L	99	90.034	ENSCLAG00000000880	CHD1L	99	90.594	Chinchilla_lanigera
ENSMICG00000002497	CHD1L	100	92.111	ENSCSAG00000018386	CHD1L	100	92.111	Chlorocebus_sabaeus
ENSMICG00000002497	CHD1L	97	76.491	ENSCPBG00000002600	CHD1L	98	76.403	Chrysemys_picta_bellii
ENSMICG00000002497	CHD1L	100	90.556	ENSCANG00000020239	CHD1L	100	90.556	Colobus_angolensis_palliatus
ENSMICG00000002497	CHD1L	96	87.586	ENSCGRG00001021624	Chd1l	98	87.586	Cricetulus_griseus_chok1gshd
ENSMICG00000002497	CHD1L	92	88.313	ENSCGRG00000007554	Chd1l	98	88.313	Cricetulus_griseus_crigri
ENSMICG00000002497	CHD1L	96	50.490	ENSCSEG00000007030	-	92	57.402	Cynoglossus_semilaevis
ENSMICG00000002497	CHD1L	95	64.617	ENSCVAG00000002595	chd1l	90	63.869	Cyprinodon_variegatus
ENSMICG00000002497	CHD1L	96	65.826	ENSDARG00000015471	chd1l	85	66.055	Danio_rerio
ENSMICG00000002497	CHD1L	100	91.000	ENSDNOG00000019504	CHD1L	98	91.412	Dasypus_novemcinctus
ENSMICG00000002497	CHD1L	99	83.000	ENSDORG00000013555	Chd1l	98	83.824	Dipodomys_ordii
ENSMICG00000002497	CHD1L	88	83.900	ENSETEG00000008445	CHD1L	89	79.791	Echinops_telfairi
ENSMICG00000002497	CHD1L	89	51.852	ENSEBUG00000005791	chd1l	77	74.468	Eptatretus_burgeri
ENSMICG00000002497	CHD1L	99	91.153	ENSEASG00005007364	CHD1L	99	92.611	Equus_asinus_asinus
ENSMICG00000002497	CHD1L	99	91.265	ENSECAG00000008915	CHD1L	99	92.611	Equus_caballus
ENSMICG00000002497	CHD1L	99	54.545	ENSELUG00000016844	chd1l	83	54.702	Esox_lucius
ENSMICG00000002497	CHD1L	99	90.315	ENSFCAG00000007777	CHD1L	99	90.417	Felis_catus
ENSMICG00000002497	CHD1L	99	72.707	ENSFALG00000006087	CHD1L	98	73.251	Ficedula_albicollis
ENSMICG00000002497	CHD1L	93	90.606	ENSFDAG00000012431	CHD1L	98	90.391	Fukomys_damarensis
ENSMICG00000002497	CHD1L	97	63.440	ENSFHEG00000012420	chd1l	85	64.302	Fundulus_heteroclitus
ENSMICG00000002497	CHD1L	90	57.592	ENSGMOG00000005076	CHD1L	100	65.607	Gadus_morhua
ENSMICG00000002497	CHD1L	96	72.864	ENSGALG00000015038	CHD1L	97	72.914	Gallus_gallus
ENSMICG00000002497	CHD1L	96	65.063	ENSGAFG00000018198	chd1l	98	61.938	Gambusia_affinis
ENSMICG00000002497	CHD1L	90	60.209	ENSGACG00000014042	chd1l	100	65.267	Gasterosteus_aculeatus
ENSMICG00000002497	CHD1L	95	77.336	ENSGAGG00000014432	CHD1L	97	77.336	Gopherus_agassizii
ENSMICG00000002497	CHD1L	100	91.333	ENSGGOG00000001067	CHD1L	100	91.333	Gorilla_gorilla
ENSMICG00000002497	CHD1L	96	64.994	ENSHBUG00000007464	chd1l	96	64.617	Haplochromis_burtoni
ENSMICG00000002497	CHD1L	99	88.130	ENSHGLG00000008933	CHD1L	99	88.130	Heterocephalus_glaber_female
ENSMICG00000002497	CHD1L	94	86.030	ENSHGLG00100007155	CHD1L	100	86.496	Heterocephalus_glaber_male
ENSMICG00000002497	CHD1L	93	63.126	ENSHCOG00000012787	chd1l	92	63.723	Hippocampus_comes
ENSMICG00000002497	CHD1L	98	60.335	ENSIPUG00000022617	chd1l	86	60.388	Ictalurus_punctatus
ENSMICG00000002497	CHD1L	99	81.000	ENSSTOG00000007032	CHD1L	99	81.000	Ictidomys_tridecemlineatus
ENSMICG00000002497	CHD1L	99	63.768	ENSKMAG00000014358	chd1l	86	65.068	Kryptolebias_marmoratus
ENSMICG00000002497	CHD1L	96	64.401	ENSLBEG00000023845	chd1l	96	64.606	Labrus_bergylta
ENSMICG00000002497	CHD1L	95	66.166	ENSLACG00000006262	CHD1L	85	66.397	Latimeria_chalumnae
ENSMICG00000002497	CHD1L	96	70.034	ENSLOCG00000010574	chd1l	87	69.738	Lepisosteus_oculatus
ENSMICG00000002497	CHD1L	95	90.221	ENSLAFG00000018136	CHD1L	99	90.695	Loxodonta_africana
ENSMICG00000002497	CHD1L	95	91.492	ENSMFAG00000043562	CHD1L	100	92.615	Macaca_fascicularis
ENSMICG00000002497	CHD1L	100	91.889	ENSMMUG00000009024	CHD1L	100	91.889	Macaca_mulatta
ENSMICG00000002497	CHD1L	100	92.000	ENSMNEG00000039905	CHD1L	100	92.000	Macaca_nemestrina
ENSMICG00000002497	CHD1L	100	92.222	ENSMLEG00000030900	CHD1L	100	92.222	Mandrillus_leucophaeus
ENSMICG00000002497	CHD1L	95	64.542	ENSMAMG00000012822	chd1l	98	62.791	Mastacembelus_armatus
ENSMICG00000002497	CHD1L	96	65.108	ENSMZEG00005020830	chd1l	86	65.701	Maylandia_zebra
ENSMICG00000002497	CHD1L	95	72.281	ENSMGAG00000014304	CHD1L	99	73.223	Meleagris_gallopavo
ENSMICG00000002497	CHD1L	91	77.500	ENSMAUG00000004712	-	99	85.359	Mesocricetus_auratus
ENSMICG00000002497	CHD1L	99	86.986	ENSMOCG00000006305	Chd1l	99	86.986	Microtus_ochrogaster
ENSMICG00000002497	CHD1L	96	60.069	ENSMMOG00000005964	chd1l	90	60.648	Mola_mola
ENSMICG00000002497	CHD1L	99	81.166	ENSMODG00000018717	CHD1L	98	82.400	Monodelphis_domestica
ENSMICG00000002497	CHD1L	96	63.574	ENSMALG00000014675	chd1l	85	64.542	Monopterus_albus
ENSMICG00000002497	CHD1L	99	86.577	MGP_CAROLIEiJ_G0025401	Chd1l	98	87.343	Mus_caroli
ENSMICG00000002497	CHD1L	97	86.281	ENSMUSG00000028089	Chd1l	98	86.735	Mus_musculus
ENSMICG00000002497	CHD1L	99	87.108	MGP_PahariEiJ_G0026845	Chd1l	99	87.108	Mus_pahari
ENSMICG00000002497	CHD1L	97	87.643	MGP_SPRETEiJ_G0026347	Chd1l	98	87.643	Mus_spretus
ENSMICG00000002497	CHD1L	100	88.889	ENSMPUG00000000615	CHD1L	99	89.718	Mustela_putorius_furo
ENSMICG00000002497	CHD1L	99	86.990	ENSMLUG00000007573	CHD1L	98	87.556	Myotis_lucifugus
ENSMICG00000002497	CHD1L	96	84.686	ENSNGAG00000000908	Chd1l	99	84.686	Nannospalax_galili
ENSMICG00000002497	CHD1L	94	62.877	ENSNBRG00000006021	chd1l	93	63.109	Neolamprologus_brichardi
ENSMICG00000002497	CHD1L	100	91.444	ENSNLEG00000000179	CHD1L	100	91.444	Nomascus_leucogenys
ENSMICG00000002497	CHD1L	94	77.647	ENSOPRG00000006973	CHD1L	99	77.607	Ochotona_princeps
ENSMICG00000002497	CHD1L	99	84.205	ENSODEG00000002494	CHD1L	99	84.650	Octodon_degus
ENSMICG00000002497	CHD1L	96	65.108	ENSONIG00000003183	chd1l	87	65.933	Oreochromis_niloticus
ENSMICG00000002497	CHD1L	85	72.927	ENSOANG00000003068	CHD1L	93	73.575	Ornithorhynchus_anatinus
ENSMICG00000002497	CHD1L	99	84.725	ENSOCUG00000009336	CHD1L	99	84.396	Oryctolagus_cuniculus
ENSMICG00000002497	CHD1L	97	62.100	ENSORLG00000003673	chd1l	93	63.115	Oryzias_latipes
ENSMICG00000002497	CHD1L	96	62.514	ENSORLG00020005123	chd1l	93	64.671	Oryzias_latipes_hni
ENSMICG00000002497	CHD1L	98	61.512	ENSORLG00015001680	chd1l	97	62.572	Oryzias_latipes_hsok
ENSMICG00000002497	CHD1L	75	61.439	ENSOMEG00000006109	chd1l	81	61.439	Oryzias_melastigma
ENSMICG00000002497	CHD1L	100	91.232	ENSOGAG00000008775	CHD1L	100	91.232	Otolemur_garnettii
ENSMICG00000002497	CHD1L	99	89.532	ENSOARG00000020547	CHD1L	98	91.093	Ovis_aries
ENSMICG00000002497	CHD1L	97	91.086	ENSPPAG00000039193	CHD1L	98	93.350	Pan_paniscus
ENSMICG00000002497	CHD1L	99	90.203	ENSPPRG00000010258	CHD1L	99	90.304	Panthera_pardus
ENSMICG00000002497	CHD1L	100	92.000	ENSPTRG00000001220	CHD1L	99	92.099	Pan_troglodytes
ENSMICG00000002497	CHD1L	100	92.000	ENSPANG00000009170	CHD1L	100	92.000	Papio_anubis
ENSMICG00000002497	CHD1L	96	65.023	ENSPKIG00000022166	chd1l	97	62.981	Paramormyrops_kingsleyae
ENSMICG00000002497	CHD1L	97	76.491	ENSPSIG00000012595	CHD1L	97	76.403	Pelodiscus_sinensis
ENSMICG00000002497	CHD1L	89	60.638	ENSPMGG00000015884	-	96	59.714	Periophthalmus_magnuspinnatus
ENSMICG00000002497	CHD1L	98	84.494	ENSPEMG00000013528	Chd1l	99	85.017	Peromyscus_maniculatus_bairdii
ENSMICG00000002497	CHD1L	92	82.203	ENSPCIG00000030409	CHD1L	98	83.313	Phascolarctos_cinereus
ENSMICG00000002497	CHD1L	97	64.652	ENSPFOG00000015948	chd1l	84	65.930	Poecilia_formosa
ENSMICG00000002497	CHD1L	97	64.553	ENSPLAG00000015145	chd1l	97	63.678	Poecilia_latipinna
ENSMICG00000002497	CHD1L	97	64.091	ENSPMEG00000008720	chd1l	90	65.197	Poecilia_mexicana
ENSMICG00000002497	CHD1L	95	62.788	ENSPREG00000017885	chd1l	97	62.327	Poecilia_reticulata
ENSMICG00000002497	CHD1L	99	91.880	ENSPPYG00000000946	CHD1L	99	91.880	Pongo_abelii
ENSMICG00000002497	CHD1L	100	77.444	ENSPCAG00000005959	CHD1L	98	78.167	Procavia_capensis
ENSMICG00000002497	CHD1L	94	81.560	ENSPVAG00000006084	CHD1L	99	81.807	Pteropus_vampyrus
ENSMICG00000002497	CHD1L	97	63.923	ENSPNYG00000013001	chd1l	95	65.006	Pundamilia_nyererei
ENSMICG00000002497	CHD1L	96	64.808	ENSPNAG00000011881	chd1l	84	65.505	Pygocentrus_nattereri
ENSMICG00000002497	CHD1L	99	85.350	ENSRNOG00000017669	Chd1l	99	86.459	Rattus_norvegicus
ENSMICG00000002497	CHD1L	100	90.444	ENSRBIG00000041272	CHD1L	100	90.444	Rhinopithecus_bieti
ENSMICG00000002497	CHD1L	97	90.525	ENSRROG00000041354	CHD1L	99	90.433	Rhinopithecus_roxellana
ENSMICG00000002497	CHD1L	99	76.966	ENSSHAG00000017395	CHD1L	97	77.867	Sarcophilus_harrisii
ENSMICG00000002497	CHD1L	97	65.789	ENSSFOG00015003649	chd1l	98	64.286	Scleropages_formosus
ENSMICG00000002497	CHD1L	98	60.444	ENSSMAG00000019377	chd1l	98	60.045	Scophthalmus_maximus
ENSMICG00000002497	CHD1L	94	64.664	ENSSDUG00000019831	chd1l	94	65.119	Seriola_dumerili
ENSMICG00000002497	CHD1L	95	64.460	ENSSLDG00000012714	chd1l	95	64.671	Seriola_lalandi_dorsalis
ENSMICG00000002497	CHD1L	99	72.697	ENSSPUG00000016865	CHD1L	98	74.027	Sphenodon_punctatus
ENSMICG00000002497	CHD1L	96	64.598	ENSSPAG00000017653	chd1l	91	65.287	Stegastes_partitus
ENSMICG00000002497	CHD1L	99	87.514	ENSSSCG00000006701	CHD1L	98	89.771	Sus_scrofa
ENSMICG00000002497	CHD1L	95	75.147	ENSTGUG00000013392	-	98	75.293	Taeniopygia_guttata
ENSMICG00000002497	CHD1L	90	58.639	ENSTRUG00000020456	-	80	55.172	Takifugu_rubripes
ENSMICG00000002497	CHD1L	91	60.417	ENSTRUG00000011753	-	82	61.801	Takifugu_rubripes
ENSMICG00000002497	CHD1L	94	59.766	ENSTNIG00000004902	chd1l	99	58.830	Tetraodon_nigroviridis
ENSMICG00000002497	CHD1L	95	87.719	ENSTTRG00000011711	CHD1L	98	88.347	Tursiops_truncatus
ENSMICG00000002497	CHD1L	99	90.439	ENSUAMG00000021991	CHD1L	99	90.632	Ursus_americanus
ENSMICG00000002497	CHD1L	99	90.214	ENSUMAG00000009733	CHD1L	99	90.214	Ursus_maritimus
ENSMICG00000002497	CHD1L	100	89.444	ENSVVUG00000007316	CHD1L	94	90.361	Vulpes_vulpes
ENSMICG00000002497	CHD1L	96	62.457	ENSXCOG00000008336	chd1l	85	63.140	Xiphophorus_couchianus
ENSMICG00000002497	CHD1L	96	65.212	ENSXMAG00000015898	chd1l	96	60.664	Xiphophorus_maculatus