EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000002538 (Gene tree)
Gene ID: 105869263
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 9909 bases
Position: chr8:8724201-8734109
Accession: 105869263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000002317	RRM_1	PF00076.22	2.1e-57	1	4
ENSMICP00000002317	RRM_1	PF00076.22	2.1e-57	2	4
ENSMICP00000002317	RRM_1	PF00076.22	2.1e-57	3	4
ENSMICP00000002317	RRM_1	PF00076.22	2.1e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000002539	-	2803	XM_012760948	ENSMICP00000002317	711 (aa)	XP_012616402	UPI000642A615

Gene Model

Click here to download ENSMICG00000002538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000002538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000002538	-	92	76.227	ENSMICG00000029975	-	86	84.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000002538	-	92	89.724	ENSG00000115053	NCL	100	90.730	Homo_sapiens
ENSMICG00000002538	-	53	96.834	ENSAMEG00000016289	NCL	100	88.178	Ailuropoda_melanoleuca
ENSMICG00000002538	-	92	91.730	ENSANAG00000035814	-	100	92.146	Aotus_nancymaae
ENSMICG00000002538	-	100	70.183	ENSANAG00000024378	-	87	74.648	Aotus_nancymaae
ENSMICG00000002538	-	68	90.833	ENSBTAG00000026909	-	95	92.308	Bos_taurus
ENSMICG00000002538	-	94	82.362	ENSBTAG00000016174	NCL	100	86.088	Bos_taurus
ENSMICG00000002538	-	74	90.164	ENSBTAG00000050728	-	85	90.164	Bos_taurus
ENSMICG00000002538	-	89	92.157	ENSBTAG00000051320	-	75	90.141	Bos_taurus
ENSMICG00000002538	-	92	85.258	ENSCJAG00000013538	NCL	100	88.440	Callithrix_jacchus
ENSMICG00000002538	-	92	88.737	ENSCAFG00000011037	NCL	100	89.261	Canis_familiaris
ENSMICG00000002538	-	84	88.411	ENSCAFG00020023145	NCL	97	89.307	Canis_lupus_dingo
ENSMICG00000002538	-	92	62.730	ENSCHIG00000012143	-	92	70.455	Capra_hircus
ENSMICG00000002538	-	85	85.832	ENSCHIG00000010894	-	100	86.507	Capra_hircus
ENSMICG00000002538	-	92	78.300	ENSCHIG00000026149	-	93	79.059	Capra_hircus
ENSMICG00000002538	-	76	96.460	ENSCHIG00000021052	-	98	96.503	Capra_hircus
ENSMICG00000002538	-	90	74.375	ENSTSYG00000036886	-	86	80.726	Carlito_syrichta
ENSMICG00000002538	-	92	88.244	ENSTSYG00000004355	-	92	89.008	Carlito_syrichta
ENSMICG00000002538	-	95	85.764	ENSTSYG00000029779	-	98	86.059	Carlito_syrichta
ENSMICG00000002538	-	91	77.692	ENSCAPG00000009405	NCL	100	79.747	Cavia_aperea
ENSMICG00000002538	-	92	81.250	ENSCPOG00000001034	NCL	100	82.706	Cavia_porcellus
ENSMICG00000002538	-	53	97.361	ENSCCAG00000021040	-	100	89.326	Cebus_capucinus
ENSMICG00000002538	-	55	87.940	ENSCCAG00000000551	-	76	88.060	Cebus_capucinus
ENSMICG00000002538	-	92	89.401	ENSCATG00000037033	NCL	100	91.702	Cercocebus_atys
ENSMICG00000002538	-	92	82.496	ENSCLAG00000013080	NCL	100	83.124	Chinchilla_lanigera
ENSMICG00000002538	-	62	97.500	ENSCSAG00000006660	NCL	95	97.500	Chlorocebus_sabaeus
ENSMICG00000002538	-	61	76.659	ENSCHOG00000012860	NCL	88	75.399	Choloepus_hoffmanni
ENSMICG00000002538	-	92	67.372	ENSCGRG00001022350	-	95	67.629	Cricetulus_griseus_chok1gshd
ENSMICG00000002538	-	92	81.098	ENSCGRG00001024315	-	91	80.945	Cricetulus_griseus_chok1gshd
ENSMICG00000002538	-	92	66.968	ENSCGRG00000000507	-	93	65.653	Cricetulus_griseus_crigri
ENSMICG00000002538	-	85	81.759	ENSCGRG00000017894	-	88	80.587	Cricetulus_griseus_crigri
ENSMICG00000002538	-	92	83.308	ENSDNOG00000010783	-	100	83.171	Dasypus_novemcinctus
ENSMICG00000002538	-	100	74.441	ENSDNOG00000046347	-	99	73.883	Dasypus_novemcinctus
ENSMICG00000002538	-	53	83.905	ENSDORG00000012513	-	91	78.067	Dipodomys_ordii
ENSMICG00000002538	-	51	73.497	ENSDORG00000023596	-	92	68.413	Dipodomys_ordii
ENSMICG00000002538	-	72	66.938	ENSETEG00000008139	-	89	66.757	Echinops_telfairi
ENSMICG00000002538	-	62	61.261	ENSETEG00000008553	-	80	64.737	Echinops_telfairi
ENSMICG00000002538	-	53	90.186	ENSETEG00000014756	-	86	90.237	Echinops_telfairi
ENSMICG00000002538	-	53	90.789	ENSETEG00000018937	-	85	80.656	Echinops_telfairi
ENSMICG00000002538	-	89	86.801	ENSEASG00005008488	NCL	100	88.352	Equus_asinus_asinus
ENSMICG00000002538	-	92	86.515	ENSECAG00000021868	NCL	100	87.917	Equus_caballus
ENSMICG00000002538	-	85	80.693	ENSEEUG00000005913	NCL	85	79.736	Erinaceus_europaeus
ENSMICG00000002538	-	92	88.146	ENSFCAG00000027622	NCL	100	88.579	Felis_catus
ENSMICG00000002538	-	91	83.821	ENSFDAG00000014291	NCL	100	85.190	Fukomys_damarensis
ENSMICG00000002538	-	92	90.184	ENSGGOG00000004300	NCL	100	90.871	Gorilla_gorilla
ENSMICG00000002538	-	91	74.154	ENSHGLG00000011069	-	92	74.579	Heterocephalus_glaber_female
ENSMICG00000002538	-	56	82.727	ENSHGLG00000005133	-	93	73.776	Heterocephalus_glaber_female
ENSMICG00000002538	-	92	82.875	ENSHGLG00000002031	-	100	84.895	Heterocephalus_glaber_female
ENSMICG00000002538	-	91	68.615	ENSHGLG00100000745	-	82	85.146	Heterocephalus_glaber_male
ENSMICG00000002538	-	92	83.028	ENSHGLG00100014537	-	100	85.455	Heterocephalus_glaber_male
ENSMICG00000002538	-	53	81.794	ENSJJAG00000016165	Ncl	91	76.498	Jaculus_jaculus
ENSMICG00000002538	-	91	73.926	ENSLAFG00000013061	NCL	91	72.477	Loxodonta_africana
ENSMICG00000002538	-	92	88.804	ENSMFAG00000040385	NCL	100	91.292	Macaca_fascicularis
ENSMICG00000002538	-	92	88.804	ENSMMUG00000018094	NCL	100	91.292	Macaca_mulatta
ENSMICG00000002538	-	62	93.651	ENSMNEG00000023839	NCL	73	94.611	Macaca_nemestrina
ENSMICG00000002538	-	92	89.555	ENSMLEG00000028935	NCL	100	91.842	Mandrillus_leucophaeus
ENSMICG00000002538	-	92	78.539	MGP_CAROLIEiJ_G0014362	Ncl	92	78.387	Mus_caroli
ENSMICG00000002538	-	92	78.234	ENSMUSG00000026234	Ncl	92	78.995	Mus_musculus
ENSMICG00000002538	-	92	77.238	MGP_PahariEiJ_G0027599	Ncl	92	77.086	Mus_pahari
ENSMICG00000002538	-	92	77.812	MGP_SPRETEiJ_G0015164	Ncl	92	80.091	Mus_spretus
ENSMICG00000002538	-	92	83.587	ENSMLUG00000014547	NCL	100	85.794	Myotis_lucifugus
ENSMICG00000002538	-	53	73.600	ENSNGAG00000006188	-	54	73.087	Nannospalax_galili
ENSMICG00000002538	-	92	80.090	ENSNGAG00000002454	-	91	80.241	Nannospalax_galili
ENSMICG00000002538	-	85	76.190	ENSNLEG00000014107	-	95	77.615	Nomascus_leucogenys
ENSMICG00000002538	-	91	61.649	ENSODEG00000007803	-	100	62.385	Octodon_degus
ENSMICG00000002538	-	53	89.920	ENSODEG00000002748	-	91	76.037	Octodon_degus
ENSMICG00000002538	-	65	84.322	ENSODEG00000002441	-	92	76.014	Octodon_degus
ENSMICG00000002538	-	91	79.326	ENSODEG00000003281	-	100	80.587	Octodon_degus
ENSMICG00000002538	-	92	76.534	ENSOCUG00000004312	NCL	100	79.383	Oryctolagus_cuniculus
ENSMICG00000002538	-	91	79.211	ENSOARG00000020709	-	92	80.425	Ovis_aries
ENSMICG00000002538	-	70	88.356	ENSOARG00000013710	-	94	75.941	Ovis_aries
ENSMICG00000002538	-	76	87.500	ENSOARG00000013270	-	100	91.209	Ovis_aries
ENSMICG00000002538	-	54	79.016	ENSOARG00000004072	-	92	67.545	Ovis_aries
ENSMICG00000002538	-	92	89.724	ENSPPAG00000011619	NCL	100	91.011	Pan_paniscus
ENSMICG00000002538	-	92	88.128	ENSPPRG00000012603	NCL	100	88.285	Panthera_pardus
ENSMICG00000002538	-	91	87.865	ENSPTIG00000010393	NCL	99	88.045	Panthera_tigris_altaica
ENSMICG00000002538	-	92	90.046	ENSPTRG00000013025	NCL	100	90.884	Pan_troglodytes
ENSMICG00000002538	-	92	88.804	ENSPANG00000010292	NCL	100	91.292	Papio_anubis
ENSMICG00000002538	-	92	83.537	ENSPPYG00000013265	NCL	100	84.958	Pongo_abelii
ENSMICG00000002538	-	91	85.802	ENSPCOG00000004160	-	94	85.736	Propithecus_coquereli
ENSMICG00000002538	-	92	92.355	ENSPCOG00000003051	-	91	92.049	Propithecus_coquereli
ENSMICG00000002538	-	92	88.262	ENSPVAG00000000297	NCL	100	89.106	Pteropus_vampyrus
ENSMICG00000002538	-	92	79.728	ENSRNOG00000018273	Ncl	92	80.333	Rattus_norvegicus
ENSMICG00000002538	-	92	84.049	ENSRBIG00000037525	-	91	85.123	Rhinopithecus_bieti
ENSMICG00000002538	-	92	97.232	ENSRBIG00000035396	-	88	95.302	Rhinopithecus_bieti
ENSMICG00000002538	-	99	86.379	ENSRROG00000036103	-	99	87.967	Rhinopithecus_roxellana
ENSMICG00000002538	-	92	89.264	ENSRROG00000028756	-	91	89.571	Rhinopithecus_roxellana
ENSMICG00000002538	-	84	74.886	ENSSBOG00000023094	-	76	75.113	Saimiri_boliviensis_boliviensis
ENSMICG00000002538	-	92	88.550	ENSSBOG00000029193	-	100	90.210	Saimiri_boliviensis_boliviensis
ENSMICG00000002538	-	62	90.205	ENSSBOG00000027549	-	96	90.205	Saimiri_boliviensis_boliviensis
ENSMICG00000002538	-	92	84.835	ENSSSCG00000016275	NCL	92	84.985	Sus_scrofa
ENSMICG00000002538	-	87	79.077	ENSTBEG00000001546	-	85	79.276	Tupaia_belangeri
ENSMICG00000002538	-	65	81.303	ENSTBEG00000002469	-	66	81.143	Tupaia_belangeri
ENSMICG00000002538	-	92	85.429	ENSTTRG00000009094	NCL	91	85.429	Tursiops_truncatus
ENSMICG00000002538	-	71	91.646	ENSUAMG00000005639	NCL	100	93.439	Ursus_americanus
ENSMICG00000002538	-	92	87.615	ENSUMAG00000015789	NCL	100	88.936	Ursus_maritimus
ENSMICG00000002538	-	69	88.028	ENSVPAG00000001796	NCL	69	88.028	Vicugna_pacos
ENSMICG00000002538	-	92	85.168	ENSVVUG00000025564	NCL	100	86.415	Vulpes_vulpes