EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000003000 (Gene tree)
Gene ID: 105871647
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 69959 bases
Position: chr2:135065801-135135759
Accession: 105871647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000002731	zf-CCCH	PF00642.24	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000003001	RC3H1-201	3632	XM_012765085	ENSMICP00000002731	1132 (aa)	XP_012620539	UPI00064392DD

Gene Model

Click here to download ENSMICG00000003000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000003000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000003000	RC3H1	92	54.270	ENSMICG00000003227	RC3H2	94	83.002

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000003000	RC3H1	100	97.440	ENSG00000135870	RC3H1	100	97.440	Homo_sapiens
ENSMICG00000003000	RC3H1	100	96.643	ENSAMEG00000015657	RC3H1	100	96.643	Ailuropoda_melanoleuca
ENSMICG00000003000	RC3H1	100	88.133	ENSAPLG00000005341	RC3H1	100	87.598	Anas_platyrhynchos
ENSMICG00000003000	RC3H1	100	85.066	ENSACAG00000015271	RC3H1	100	84.602	Anolis_carolinensis
ENSMICG00000003000	RC3H1	100	97.529	ENSANAG00000036716	RC3H1	100	97.529	Aotus_nancymaae
ENSMICG00000003000	RC3H1	100	95.940	ENSBTAG00000052708	RC3H1	100	95.940	Bos_taurus
ENSMICG00000003000	RC3H1	100	97.352	ENSCJAG00000009106	RC3H1	100	97.352	Callithrix_jacchus
ENSMICG00000003000	RC3H1	100	96.908	ENSCAFG00000014434	RC3H1	100	96.908	Canis_familiaris
ENSMICG00000003000	RC3H1	100	96.823	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSMICG00000003000	RC3H1	100	96.290	ENSCHIG00000002873	RC3H1	100	96.290	Capra_hircus
ENSMICG00000003000	RC3H1	99	95.230	ENSTSYG00000003913	RC3H1	99	95.230	Carlito_syrichta
ENSMICG00000003000	RC3H1	100	92.145	ENSCPOG00000004349	RC3H1	100	91.880	Cavia_porcellus
ENSMICG00000003000	RC3H1	100	95.146	ENSCCAG00000025652	RC3H1	100	95.234	Cebus_capucinus
ENSMICG00000003000	RC3H1	100	97.617	ENSCATG00000033497	RC3H1	100	97.617	Cercocebus_atys
ENSMICG00000003000	RC3H1	100	95.675	ENSCLAG00000011267	RC3H1	100	95.675	Chinchilla_lanigera
ENSMICG00000003000	RC3H1	96	97.606	ENSCSAG00000011823	RC3H1	85	97.606	Chlorocebus_sabaeus
ENSMICG00000003000	RC3H1	100	89.464	ENSCPBG00000014670	RC3H1	100	88.938	Chrysemys_picta_bellii
ENSMICG00000003000	RC3H1	100	97.619	ENSCANG00000032120	RC3H1	100	97.619	Colobus_angolensis_palliatus
ENSMICG00000003000	RC3H1	100	94.611	ENSCGRG00001020812	Rc3h1	100	94.170	Cricetulus_griseus_chok1gshd
ENSMICG00000003000	RC3H1	100	94.611	ENSCGRG00000011952	Rc3h1	100	94.170	Cricetulus_griseus_crigri
ENSMICG00000003000	RC3H1	55	95.659	ENSDNOG00000011494	RC3H1	99	95.659	Dasypus_novemcinctus
ENSMICG00000003000	RC3H1	100	96.113	ENSDORG00000004855	Rc3h1	100	96.113	Dipodomys_ordii
ENSMICG00000003000	RC3H1	82	96.647	ENSETEG00000012064	RC3H1	87	96.647	Echinops_telfairi
ENSMICG00000003000	RC3H1	100	95.936	ENSEASG00005017000	RC3H1	100	95.936	Equus_asinus_asinus
ENSMICG00000003000	RC3H1	100	95.760	ENSECAG00000021208	RC3H1	100	95.760	Equus_caballus
ENSMICG00000003000	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSMICG00000003000	RC3H1	100	97.087	ENSFCAG00000014924	RC3H1	100	97.087	Felis_catus
ENSMICG00000003000	RC3H1	100	86.976	ENSFALG00000002947	RC3H1	100	85.827	Ficedula_albicollis
ENSMICG00000003000	RC3H1	100	95.410	ENSFDAG00000013303	RC3H1	100	95.410	Fukomys_damarensis
ENSMICG00000003000	RC3H1	100	87.456	ENSGALG00000004587	RC3H1	100	86.918	Gallus_gallus
ENSMICG00000003000	RC3H1	100	87.796	ENSGAGG00000018194	RC3H1	100	87.621	Gopherus_agassizii
ENSMICG00000003000	RC3H1	100	90.677	ENSGGOG00000005735	RC3H1	100	90.677	Gorilla_gorilla
ENSMICG00000003000	RC3H1	88	89.039	ENSHGLG00000004183	-	99	88.995	Heterocephalus_glaber_female
ENSMICG00000003000	RC3H1	100	95.146	ENSHGLG00100008577	RC3H1	100	95.146	Heterocephalus_glaber_male
ENSMICG00000003000	RC3H1	100	96.734	ENSSTOG00000016033	RC3H1	100	96.734	Ictidomys_tridecemlineatus
ENSMICG00000003000	RC3H1	100	95.230	ENSJJAG00000018915	Rc3h1	100	94.876	Jaculus_jaculus
ENSMICG00000003000	RC3H1	100	75.109	ENSLACG00000016186	RC3H1	100	77.545	Latimeria_chalumnae
ENSMICG00000003000	RC3H1	97	97.721	ENSLAFG00000004367	RC3H1	100	97.721	Loxodonta_africana
ENSMICG00000003000	RC3H1	100	97.529	ENSMFAG00000033725	RC3H1	100	97.529	Macaca_fascicularis
ENSMICG00000003000	RC3H1	100	97.440	ENSMMUG00000000630	RC3H1	100	97.440	Macaca_mulatta
ENSMICG00000003000	RC3H1	100	97.617	ENSMNEG00000035968	RC3H1	100	97.617	Macaca_nemestrina
ENSMICG00000003000	RC3H1	100	97.529	ENSMLEG00000037455	RC3H1	100	97.529	Mandrillus_leucophaeus
ENSMICG00000003000	RC3H1	88	94.657	ENSMAUG00000020864	Rc3h1	93	94.153	Mesocricetus_auratus
ENSMICG00000003000	RC3H1	93	93.175	ENSMOCG00000016587	Rc3h1	98	92.796	Microtus_ochrogaster
ENSMICG00000003000	RC3H1	100	92.416	ENSMODG00000004289	RC3H1	100	92.504	Monodelphis_domestica
ENSMICG00000003000	RC3H1	100	93.640	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.198	Mus_caroli
ENSMICG00000003000	RC3H1	100	93.551	ENSMUSG00000040423	Rc3h1	100	93.110	Mus_musculus
ENSMICG00000003000	RC3H1	100	93.551	MGP_PahariEiJ_G0027992	Rc3h1	100	93.110	Mus_pahari
ENSMICG00000003000	RC3H1	100	93.375	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.933	Mus_spretus
ENSMICG00000003000	RC3H1	100	96.558	ENSMPUG00000004747	RC3H1	100	96.558	Mustela_putorius_furo
ENSMICG00000003000	RC3H1	100	95.583	ENSMLUG00000011127	RC3H1	100	95.583	Myotis_lucifugus
ENSMICG00000003000	RC3H1	100	96.025	ENSNGAG00000011135	Rc3h1	100	95.583	Nannospalax_galili
ENSMICG00000003000	RC3H1	100	97.352	ENSNLEG00000015327	RC3H1	100	97.352	Nomascus_leucogenys
ENSMICG00000003000	RC3H1	99	83.363	ENSOPRG00000013068	RC3H1	99	83.009	Ochotona_princeps
ENSMICG00000003000	RC3H1	100	94.969	ENSODEG00000014185	RC3H1	100	94.969	Octodon_degus
ENSMICG00000003000	RC3H1	100	91.092	ENSOANG00000000924	RC3H1	100	91.266	Ornithorhynchus_anatinus
ENSMICG00000003000	RC3H1	99	96.416	ENSOCUG00000004930	RC3H1	98	96.416	Oryctolagus_cuniculus
ENSMICG00000003000	RC3H1	100	91.358	ENSOGAG00000004044	RC3H1	100	91.358	Otolemur_garnettii
ENSMICG00000003000	RC3H1	100	96.316	ENSOARG00000013011	RC3H1	100	96.316	Ovis_aries
ENSMICG00000003000	RC3H1	100	97.443	ENSPPAG00000039253	RC3H1	100	97.443	Pan_paniscus
ENSMICG00000003000	RC3H1	100	96.555	ENSPPRG00000009007	RC3H1	100	96.555	Panthera_pardus
ENSMICG00000003000	RC3H1	100	96.922	ENSPTIG00000015326	RC3H1	100	96.922	Panthera_tigris_altaica
ENSMICG00000003000	RC3H1	100	97.443	ENSPTRG00000001702	RC3H1	100	97.443	Pan_troglodytes
ENSMICG00000003000	RC3H1	100	97.529	ENSPANG00000008886	RC3H1	100	97.529	Papio_anubis
ENSMICG00000003000	RC3H1	100	88.860	ENSPSIG00000016181	RC3H1	100	89.035	Pelodiscus_sinensis
ENSMICG00000003000	RC3H1	100	93.993	ENSPEMG00000011966	Rc3h1	100	93.463	Peromyscus_maniculatus_bairdii
ENSMICG00000003000	RC3H1	70	94.557	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSMICG00000003000	RC3H1	100	94.175	ENSPPYG00000000490	RC3H1	98	96.746	Pongo_abelii
ENSMICG00000003000	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSMICG00000003000	RC3H1	83	98.289	ENSPCOG00000021795	RC3H1	96	98.289	Propithecus_coquereli
ENSMICG00000003000	RC3H1	100	88.163	ENSPVAG00000007593	RC3H1	100	88.163	Pteropus_vampyrus
ENSMICG00000003000	RC3H1	97	61.356	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSMICG00000003000	RC3H1	100	97.531	ENSRBIG00000037743	RC3H1	100	97.531	Rhinopithecus_bieti
ENSMICG00000003000	RC3H1	100	97.440	ENSRROG00000036546	RC3H1	100	97.440	Rhinopithecus_roxellana
ENSMICG00000003000	RC3H1	93	87.252	ENSSBOG00000010664	RC3H1	100	91.098	Saimiri_boliviensis_boliviensis
ENSMICG00000003000	RC3H1	100	91.366	ENSSHAG00000007589	RC3H1	100	91.454	Sarcophilus_harrisii
ENSMICG00000003000	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSMICG00000003000	RC3H1	100	84.137	ENSSPUG00000018472	RC3H1	100	83.421	Sphenodon_punctatus
ENSMICG00000003000	RC3H1	100	97.261	ENSSSCG00000015498	RC3H1	100	97.261	Sus_scrofa
ENSMICG00000003000	RC3H1	100	87.621	ENSTGUG00000004090	RC3H1	100	86.907	Taeniopygia_guttata
ENSMICG00000003000	RC3H1	89	96.866	ENSTBEG00000005015	RC3H1	89	96.866	Tupaia_belangeri
ENSMICG00000003000	RC3H1	100	96.476	ENSTTRG00000008572	RC3H1	100	96.476	Tursiops_truncatus
ENSMICG00000003000	RC3H1	100	96.025	ENSUAMG00000019525	RC3H1	100	96.025	Ursus_americanus
ENSMICG00000003000	RC3H1	100	96.558	ENSUMAG00000020087	RC3H1	100	96.558	Ursus_maritimus
ENSMICG00000003000	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSMICG00000003000	RC3H1	100	96.567	ENSVVUG00000014201	RC3H1	100	96.567	Vulpes_vulpes
ENSMICG00000003000	RC3H1	100	78.416	ENSXETG00000020030	rc3h1	100	77.700	Xenopus_tropicalis