EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000003297 (Gene tree)
Gene ID: 105873459
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 10462 bases
Position: chr14:19097344-19107805
Accession: 105873459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000019313	Ribonuc_P_40	PF08584.11	5.3e-93	1	1
ENSMICP00000002991	Ribonuc_P_40	PF08584.11	1.3e-76	1	1
ENSMICP00000037402	Ribonuc_P_40	PF08584.11	8e-74	1	2
ENSMICP00000037402	Ribonuc_P_40	PF08584.11	8e-74	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000043009	RPP40-201	2651	XM_012768389	ENSMICP00000019313	394 (aa)	XP_012623843	UPI000643525E
ENSMICT00000039590	RPP40-203	966	-	ENSMICP00000037402	321 (aa)	-	UPI00085B01A2
ENSMICT00000003294	RPP40-202	1023	-	ENSMICP00000002991	340 (aa)	-	UPI00085B27E4

Gene Model

Click here to download ENSMICG00000003297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000003297's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000003297	RPP40	100	87.353	ENSG00000124787	RPP40	100	87.603	Homo_sapiens
ENSMICG00000003297	RPP40	88	34.114	ENSAPOG00000008660	rpp40	92	34.114	Acanthochromis_polyacanthus
ENSMICG00000003297	RPP40	100	82.094	ENSAMEG00000012938	RPP40	100	88.154	Ailuropoda_melanoleuca
ENSMICG00000003297	RPP40	98	34.454	ENSACIG00000003617	rpp40	98	38.095	Amphilophus_citrinellus
ENSMICG00000003297	RPP40	98	35.775	ENSAOCG00000011846	rpp40	99	39.496	Amphiprion_ocellaris
ENSMICG00000003297	RPP40	98	35.775	ENSAPEG00000001322	rpp40	99	39.496	Amphiprion_percula
ENSMICG00000003297	RPP40	98	36.134	ENSATEG00000006584	rpp40	99	40.111	Anabas_testudineus
ENSMICG00000003297	RPP40	77	65.894	ENSAPLG00000005691	RPP40	99	65.894	Anas_platyrhynchos
ENSMICG00000003297	RPP40	99	58.496	ENSACAG00000006550	RPP40	90	62.060	Anolis_carolinensis
ENSMICG00000003297	RPP40	100	84.735	ENSANAG00000029246	RPP40	100	85.124	Aotus_nancymaae
ENSMICG00000003297	RPP40	98	37.394	ENSACLG00000015883	rpp40	96	40.563	Astatotilapia_calliptera
ENSMICG00000003297	RPP40	98	43.820	ENSAMXG00000001755	rpp40	99	47.899	Astyanax_mexicanus
ENSMICG00000003297	RPP40	100	77.686	ENSBTAG00000003332	RPP40	100	83.747	Bos_taurus
ENSMICG00000003297	RPP40	100	85.670	ENSCJAG00000021373	RPP40	100	86.226	Callithrix_jacchus
ENSMICG00000003297	RPP40	100	82.369	ENSCAFG00000009435	RPP40	100	88.154	Canis_familiaris
ENSMICG00000003297	RPP40	100	82.369	ENSCAFG00020013380	RPP40	100	88.154	Canis_lupus_dingo
ENSMICG00000003297	RPP40	100	78.237	ENSCHIG00000016849	RPP40	100	84.022	Capra_hircus
ENSMICG00000003297	RPP40	100	90.031	ENSTSYG00000032857	RPP40	100	90.031	Carlito_syrichta
ENSMICG00000003297	RPP40	89	75.405	ENSCAPG00000004957	RPP40	98	77.982	Cavia_aperea
ENSMICG00000003297	RPP40	100	85.588	ENSCPOG00000005855	RPP40	100	85.950	Cavia_porcellus
ENSMICG00000003297	RPP40	100	85.588	ENSCCAG00000019809	RPP40	100	86.226	Cebus_capucinus
ENSMICG00000003297	RPP40	100	87.539	ENSCATG00000038787	RPP40	100	87.879	Cercocebus_atys
ENSMICG00000003297	RPP40	100	86.176	ENSCLAG00000003235	RPP40	100	86.226	Chinchilla_lanigera
ENSMICG00000003297	RPP40	100	81.818	ENSCSAG00000007307	RPP40	100	87.879	Chlorocebus_sabaeus
ENSMICG00000003297	RPP40	74	70.800	ENSCHOG00000005856	-	100	70.800	Choloepus_hoffmanni
ENSMICG00000003297	RPP40	99	64.167	ENSCPBG00000009003	RPP40	99	68.889	Chrysemys_picta_bellii
ENSMICG00000003297	RPP40	100	87.539	ENSCANG00000033965	RPP40	100	87.879	Colobus_angolensis_palliatus
ENSMICG00000003297	RPP40	100	80.294	ENSCGRG00001018328	Rpp40	100	80.716	Cricetulus_griseus_chok1gshd
ENSMICG00000003297	RPP40	100	75.207	ENSCGRG00000011344	Rpp40	100	80.716	Cricetulus_griseus_crigri
ENSMICG00000003297	RPP40	98	34.091	ENSCSEG00000015006	-	98	37.921	Cynoglossus_semilaevis
ENSMICG00000003297	RPP40	68	35.897	ENSCVAG00000012169	rpp40	100	35.897	Cyprinodon_variegatus
ENSMICG00000003297	RPP40	99	45.961	ENSDARG00000017605	rpp40	99	49.861	Danio_rerio
ENSMICG00000003297	RPP40	75	85.185	ENSDNOG00000048136	RPP40	99	85.185	Dasypus_novemcinctus
ENSMICG00000003297	RPP40	100	77.961	ENSDORG00000029944	-	100	83.471	Dipodomys_ordii
ENSMICG00000003297	RPP40	100	63.099	ENSDORG00000011196	-	100	63.099	Dipodomys_ordii
ENSMICG00000003297	RPP40	92	82.022	ENSETEG00000007458	RPP40	100	69.146	Echinops_telfairi
ENSMICG00000003297	RPP40	98	43.662	ENSEBUG00000000386	rpp40	99	46.479	Eptatretus_burgeri
ENSMICG00000003297	RPP40	100	84.298	ENSEASG00005012116	RPP40	86	86.375	Equus_asinus_asinus
ENSMICG00000003297	RPP40	100	84.298	ENSECAG00000017247	RPP40	91	82.482	Equus_caballus
ENSMICG00000003297	RPP40	70	90.244	ENSEEUG00000012087	RPP40	80	90.244	Erinaceus_europaeus
ENSMICG00000003297	RPP40	98	45.531	ENSELUG00000017004	rpp40	99	49.441	Esox_lucius
ENSMICG00000003297	RPP40	100	88.824	ENSFCAG00000009249	RPP40	100	88.981	Felis_catus
ENSMICG00000003297	RPP40	85	58.104	ENSFALG00000013166	RPP40	100	63.609	Ficedula_albicollis
ENSMICG00000003297	RPP40	100	82.645	ENSFDAG00000013001	-	100	88.705	Fukomys_damarensis
ENSMICG00000003297	RPP40	79	66.176	ENSFDAG00000000265	-	99	69.178	Fukomys_damarensis
ENSMICG00000003297	RPP40	98	37.746	ENSFHEG00000021429	rpp40	88	40.896	Fundulus_heteroclitus
ENSMICG00000003297	RPP40	87	45.000	ENSGMOG00000018653	rpp40	100	45.000	Gadus_morhua
ENSMICG00000003297	RPP40	99	64.095	ENSGALG00000036074	RPP40	99	64.722	Gallus_gallus
ENSMICG00000003297	RPP40	80	32.982	ENSGAFG00000004189	-	98	34.783	Gambusia_affinis
ENSMICG00000003297	RPP40	98	36.975	ENSGACG00000002472	rpp40	99	40.896	Gasterosteus_aculeatus
ENSMICG00000003297	RPP40	99	64.444	ENSGAGG00000012918	RPP40	99	69.167	Gopherus_agassizii
ENSMICG00000003297	RPP40	100	87.227	ENSGGOG00000013764	RPP40	100	87.328	Gorilla_gorilla
ENSMICG00000003297	RPP40	90	35.952	ENSHBUG00000009378	rpp40	94	39.339	Haplochromis_burtoni
ENSMICG00000003297	RPP40	100	86.765	ENSHGLG00000004871	RPP40	100	87.328	Heterocephalus_glaber_female
ENSMICG00000003297	RPP40	100	86.765	ENSHGLG00100002080	RPP40	100	87.328	Heterocephalus_glaber_male
ENSMICG00000003297	RPP40	97	30.747	ENSHCOG00000013264	-	94	33.711	Hippocampus_comes
ENSMICG00000003297	RPP40	99	45.404	ENSIPUG00000008951	RPP40	99	48.333	Ictalurus_punctatus
ENSMICG00000003297	RPP40	100	80.165	ENSSTOG00000011199	RPP40	100	86.226	Ictidomys_tridecemlineatus
ENSMICG00000003297	RPP40	100	80.882	ENSJJAG00000020629	Rpp40	100	80.882	Jaculus_jaculus
ENSMICG00000003297	RPP40	98	34.454	ENSKMAG00000019358	rpp40	99	38.375	Kryptolebias_marmoratus
ENSMICG00000003297	RPP40	98	38.095	ENSLBEG00000022724	rpp40	99	41.457	Labrus_bergylta
ENSMICG00000003297	RPP40	99	55.000	ENSLACG00000014848	RPP40	99	59.167	Latimeria_chalumnae
ENSMICG00000003297	RPP40	100	50.138	ENSLOCG00000011650	rpp40	100	54.545	Lepisosteus_oculatus
ENSMICG00000003297	RPP40	82	85.357	ENSLAFG00000007530	RPP40	100	85.809	Loxodonta_africana
ENSMICG00000003297	RPP40	100	87.353	ENSMFAG00000043100	RPP40	100	87.603	Macaca_fascicularis
ENSMICG00000003297	RPP40	100	87.227	ENSMMUG00000004966	RPP40	100	87.328	Macaca_mulatta
ENSMICG00000003297	RPP40	100	87.941	ENSMNEG00000041986	RPP40	100	88.154	Macaca_nemestrina
ENSMICG00000003297	RPP40	98	79.104	ENSMLEG00000040851	RPP40	100	88.000	Mandrillus_leucophaeus
ENSMICG00000003297	RPP40	98	36.338	ENSMAMG00000019551	rpp40	98	40.336	Mastacembelus_armatus
ENSMICG00000003297	RPP40	99	37.883	ENSMZEG00005019475	rpp40	99	40.997	Maylandia_zebra
ENSMICG00000003297	RPP40	99	57.222	ENSMGAG00000004009	RPP40	99	61.944	Meleagris_gallopavo
ENSMICG00000003297	RPP40	100	85.000	ENSMAUG00000010268	Rpp40	100	85.000	Mesocricetus_auratus
ENSMICG00000003297	RPP40	100	84.412	ENSMOCG00000000305	Rpp40	100	84.412	Microtus_ochrogaster
ENSMICG00000003297	RPP40	98	35.503	ENSMMOG00000020591	-	99	36.134	Mola_mola
ENSMICG00000003297	RPP40	100	75.275	ENSMODG00000009826	RPP40	100	80.769	Monodelphis_domestica
ENSMICG00000003297	RPP40	98	40.000	ENSMALG00000020133	rpp40	99	40.336	Monopterus_albus
ENSMICG00000003297	RPP40	100	85.294	MGP_CAROLIEiJ_G0018429	Rpp40	100	85.399	Mus_caroli
ENSMICG00000003297	RPP40	100	84.706	ENSMUSG00000021418	Rpp40	100	84.848	Mus_musculus
ENSMICG00000003297	RPP40	100	83.824	MGP_PahariEiJ_G0019497	Rpp40	100	83.824	Mus_pahari
ENSMICG00000003297	RPP40	100	84.412	MGP_SPRETEiJ_G0019309	Rpp40	100	84.573	Mus_spretus
ENSMICG00000003297	RPP40	100	82.920	ENSMPUG00000000530	RPP40	99	85.492	Mustela_putorius_furo
ENSMICG00000003297	RPP40	100	80.716	ENSMLUG00000000501	RPP40	100	86.501	Myotis_lucifugus
ENSMICG00000003297	RPP40	100	85.882	ENSNGAG00000023955	-	100	86.501	Nannospalax_galili
ENSMICG00000003297	RPP40	95	76.235	ENSNGAG00000022529	-	100	77.457	Nannospalax_galili
ENSMICG00000003297	RPP40	87	39.333	ENSNBRG00000017465	rpp40	86	39.474	Neolamprologus_brichardi
ENSMICG00000003297	RPP40	100	86.176	ENSNLEG00000034397	RPP40	100	86.501	Nomascus_leucogenys
ENSMICG00000003297	RPP40	100	76.309	ENSMEUG00000005300	RPP40	100	76.309	Notamacropus_eugenii
ENSMICG00000003297	RPP40	100	73.278	ENSODEG00000018153	-	100	79.063	Octodon_degus
ENSMICG00000003297	RPP40	88	81.605	ENSODEG00000006170	-	100	81.605	Octodon_degus
ENSMICG00000003297	RPP40	100	77.961	ENSODEG00000007255	-	100	84.022	Octodon_degus
ENSMICG00000003297	RPP40	99	37.119	ENSONIG00000014016	rpp40	99	40.997	Oreochromis_niloticus
ENSMICG00000003297	RPP40	76	74.751	ENSOANG00000001200	RPP40	99	74.751	Ornithorhynchus_anatinus
ENSMICG00000003297	RPP40	99	71.745	ENSOCUG00000000354	RPP40	99	77.839	Oryctolagus_cuniculus
ENSMICG00000003297	RPP40	99	35.475	ENSORLG00000008242	-	100	38.611	Oryzias_latipes
ENSMICG00000003297	RPP40	99	35.475	ENSORLG00020013745	-	96	37.566	Oryzias_latipes_hni
ENSMICG00000003297	RPP40	99	35.754	ENSORLG00015000887	-	100	38.889	Oryzias_latipes_hsok
ENSMICG00000003297	RPP40	99	36.389	ENSOMEG00000002747	rpp40	100	40.000	Oryzias_melastigma
ENSMICG00000003297	RPP40	100	85.124	ENSOGAG00000006055	RPP40	100	91.460	Otolemur_garnettii
ENSMICG00000003297	RPP40	91	73.874	ENSOARG00000018783	RPP40	100	81.848	Ovis_aries
ENSMICG00000003297	RPP40	100	87.539	ENSPPAG00000023703	RPP40	100	87.539	Pan_paniscus
ENSMICG00000003297	RPP40	100	88.529	ENSPPRG00000005612	RPP40	100	88.705	Panthera_pardus
ENSMICG00000003297	RPP40	100	81.471	ENSPTIG00000018847	RPP40	100	82.094	Panthera_tigris_altaica
ENSMICG00000003297	RPP40	100	87.850	ENSPTRG00000017690	RPP40	100	87.850	Pan_troglodytes
ENSMICG00000003297	RPP40	100	87.539	ENSPANG00000017865	RPP40	100	87.879	Papio_anubis
ENSMICG00000003297	RPP40	98	46.369	ENSPKIG00000006311	rpp40	99	50.139	Paramormyrops_kingsleyae
ENSMICG00000003297	RPP40	65	69.820	ENSPSIG00000007854	RPP40	100	69.820	Pelodiscus_sinensis
ENSMICG00000003297	RPP40	92	78.344	ENSPEMG00000020809	Rpp40	91	78.344	Peromyscus_maniculatus_bairdii
ENSMICG00000003297	RPP40	77	41.825	ENSPMAG00000008412	rpp40	99	44.891	Petromyzon_marinus
ENSMICG00000003297	RPP40	100	80.294	ENSPCIG00000010682	RPP40	100	80.992	Phascolarctos_cinereus
ENSMICG00000003297	RPP40	98	34.174	ENSPFOG00000011460	rpp40	98	37.326	Poecilia_formosa
ENSMICG00000003297	RPP40	98	34.648	ENSPLAG00000001334	rpp40	99	37.815	Poecilia_latipinna
ENSMICG00000003297	RPP40	98	34.366	ENSPMEG00000007721	rpp40	99	37.535	Poecilia_mexicana
ENSMICG00000003297	RPP40	98	34.746	ENSPREG00000009215	rpp40	99	38.375	Poecilia_reticulata
ENSMICG00000003297	RPP40	100	81.543	ENSPPYG00000016194	RPP40	100	87.603	Pongo_abelii
ENSMICG00000003297	RPP40	100	93.824	ENSPCOG00000003907	RPP40	100	94.215	Propithecus_coquereli
ENSMICG00000003297	RPP40	100	83.747	ENSPVAG00000011325	RPP40	100	89.807	Pteropus_vampyrus
ENSMICG00000003297	RPP40	81	36.735	ENSPNYG00000004432	rpp40	98	40.940	Pundamilia_nyererei
ENSMICG00000003297	RPP40	98	43.017	ENSPNAG00000019125	rpp40	99	46.369	Pygocentrus_nattereri
ENSMICG00000003297	RPP40	100	79.063	ENSRNOG00000016226	Rpp40	100	84.573	Rattus_norvegicus
ENSMICG00000003297	RPP40	100	87.539	ENSRBIG00000035800	RPP40	100	87.879	Rhinopithecus_bieti
ENSMICG00000003297	RPP40	100	87.539	ENSRROG00000039116	RPP40	100	87.879	Rhinopithecus_roxellana
ENSMICG00000003297	RPP40	100	85.047	ENSSBOG00000020297	RPP40	100	85.950	Saimiri_boliviensis_boliviensis
ENSMICG00000003297	RPP40	77	76.046	ENSSHAG00000002102	RPP40	100	79.137	Sarcophilus_harrisii
ENSMICG00000003297	RPP40	99	45.730	ENSSFOG00015001142	rpp40	82	48.641	Scleropages_formosus
ENSMICG00000003297	RPP40	98	37.389	ENSSDUG00000007202	rpp40	99	39.776	Seriola_dumerili
ENSMICG00000003297	RPP40	98	37.685	ENSSLDG00000017563	rpp40	99	39.496	Seriola_lalandi_dorsalis
ENSMICG00000003297	RPP40	75	66.441	ENSSPUG00000018950	-	100	66.441	Sphenodon_punctatus
ENSMICG00000003297	RPP40	99	66.352	ENSSPUG00000017487	-	99	66.944	Sphenodon_punctatus
ENSMICG00000003297	RPP40	98	36.620	ENSSPAG00000022716	rpp40	99	40.616	Stegastes_partitus
ENSMICG00000003297	RPP40	100	82.866	ENSSSCG00000000998	RPP40	100	82.866	Sus_scrofa
ENSMICG00000003297	RPP40	99	59.497	ENSTGUG00000002258	-	100	64.525	Taeniopygia_guttata
ENSMICG00000003297	RPP40	55	68.182	ENSTGUG00000015246	-	100	68.362	Taeniopygia_guttata
ENSMICG00000003297	RPP40	97	37.394	ENSTRUG00000003755	rpp40	98	41.360	Takifugu_rubripes
ENSMICG00000003297	RPP40	99	36.034	ENSTNIG00000003077	rpp40	98	39.943	Tetraodon_nigroviridis
ENSMICG00000003297	RPP40	74	59.200	ENSTBEG00000014467	-	73	59.200	Tupaia_belangeri
ENSMICG00000003297	RPP40	99	79.006	ENSTTRG00000007319	RPP40	100	79.006	Tursiops_truncatus
ENSMICG00000003297	RPP40	100	87.353	ENSUAMG00000002159	RPP40	100	87.879	Ursus_americanus
ENSMICG00000003297	RPP40	100	84.264	ENSUMAG00000018639	RPP40	100	84.264	Ursus_maritimus
ENSMICG00000003297	RPP40	79	63.823	ENSVPAG00000004652	-	99	63.823	Vicugna_pacos
ENSMICG00000003297	RPP40	100	81.543	ENSVVUG00000005451	RPP40	100	87.328	Vulpes_vulpes
ENSMICG00000003297	RPP40	99	50.829	ENSXETG00000017617	rpp40	100	53.425	Xenopus_tropicalis
ENSMICG00000003297	RPP40	59	40.909	ENSXCOG00000019991	-	87	31.546	Xiphophorus_couchianus
ENSMICG00000003297	RPP40	98	32.370	ENSXMAG00000024940	rpp40	98	32.370	Xiphophorus_maculatus