EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000003377 (Gene tree)
Gene ID: 105870300
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 78365 bases
Position: chr15:38901180-38979544
Accession: 105870300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000034880	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSMICP00000003077	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSMICP00000003077	RRM_1	PF00076.22	3.3e-40	1	3
ENSMICP00000003077	RRM_1	PF00076.22	3.3e-40	2	3
ENSMICP00000003077	RRM_1	PF00076.22	3.3e-40	3	3
ENSMICP00000034880	RRM_1	PF00076.22	6.1e-40	1	3
ENSMICP00000034880	RRM_1	PF00076.22	6.1e-40	2	3
ENSMICP00000034880	RRM_1	PF00076.22	6.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000026764	A1CF-201	1988	XM_012762865	ENSMICP00000034880	590 (aa)	XP_012618319	UPI000642C3DB
ENSMICT00000003383	A1CF-202	1797	-	ENSMICP00000003077	598 (aa)	-	UPI00085B0855

Gene Model

Click here to download ENSMICG00000003377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000003377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000003377	A1CF	73	61.503	ENSMICG00000026417	RBM47	73	61.364
ENSMICG00000003377	A1CF	50	54.027	ENSMICG00000007192	SYNCRIP	65	55.455
ENSMICG00000003377	A1CF	89	72.667	ENSMICG00000042747	RBM46	86	72.667
ENSMICG00000003377	A1CF	53	52.215	ENSMICG00000000748	HNRNPR	55	54.949

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000003377	A1CF	100	96.102	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSMICG00000003377	A1CF	100	74.415	ENSAPOG00000008259	a1cf	100	73.411	Acanthochromis_polyacanthus
ENSMICG00000003377	A1CF	100	93.144	ENSAMEG00000000523	A1CF	100	93.144	Ailuropoda_melanoleuca
ENSMICG00000003377	A1CF	100	77.759	ENSACIG00000008632	a1cf	100	77.265	Amphilophus_citrinellus
ENSMICG00000003377	A1CF	100	75.083	ENSAOCG00000023744	a1cf	96	83.188	Amphiprion_ocellaris
ENSMICG00000003377	A1CF	100	73.941	ENSAPEG00000009537	a1cf	100	73.779	Amphiprion_percula
ENSMICG00000003377	A1CF	100	77.796	ENSATEG00000013720	a1cf	100	77.303	Anabas_testudineus
ENSMICG00000003377	A1CF	100	86.811	ENSAPLG00000002964	A1CF	100	86.477	Anas_platyrhynchos
ENSMICG00000003377	A1CF	100	83.926	ENSACAG00000015269	A1CF	100	83.418	Anolis_carolinensis
ENSMICG00000003377	A1CF	100	96.441	ENSANAG00000019974	A1CF	100	96.441	Aotus_nancymaae
ENSMICG00000003377	A1CF	100	74.629	ENSACLG00000017428	a1cf	100	74.629	Astatotilapia_calliptera
ENSMICG00000003377	A1CF	100	73.388	ENSAMXG00000018180	a1cf	100	72.397	Astyanax_mexicanus
ENSMICG00000003377	A1CF	100	94.746	ENSBTAG00000021195	A1CF	100	95.933	Bos_taurus
ENSMICG00000003377	A1CF	100	95.485	ENSCJAG00000005045	A1CF	100	95.485	Callithrix_jacchus
ENSMICG00000003377	A1CF	100	92.809	ENSCAFG00000015581	A1CF	100	92.809	Canis_familiaris
ENSMICG00000003377	A1CF	100	92.809	ENSCAFG00020026421	A1CF	98	95.960	Canis_lupus_dingo
ENSMICG00000003377	A1CF	100	92.809	ENSCHIG00000020411	A1CF	100	92.642	Capra_hircus
ENSMICG00000003377	A1CF	100	91.030	ENSTSYG00000001755	A1CF	100	95.512	Carlito_syrichta
ENSMICG00000003377	A1CF	100	83.642	ENSCAPG00000017386	A1CF	90	95.510	Cavia_aperea
ENSMICG00000003377	A1CF	100	93.813	ENSCPOG00000009807	A1CF	100	93.311	Cavia_porcellus
ENSMICG00000003377	A1CF	100	95.151	ENSCCAG00000018168	A1CF	100	95.151	Cebus_capucinus
ENSMICG00000003377	A1CF	100	95.932	ENSCATG00000043715	A1CF	100	95.932	Cercocebus_atys
ENSMICG00000003377	A1CF	100	92.988	ENSCLAG00000010424	A1CF	100	92.654	Chinchilla_lanigera
ENSMICG00000003377	A1CF	100	93.980	ENSCSAG00000007032	A1CF	100	93.478	Chlorocebus_sabaeus
ENSMICG00000003377	A1CF	100	89.517	ENSCHOG00000009089	A1CF	98	91.252	Choloepus_hoffmanni
ENSMICG00000003377	A1CF	100	86.477	ENSCPBG00000026464	A1CF	100	86.311	Chrysemys_picta_bellii
ENSMICG00000003377	A1CF	100	93.980	ENSCANG00000038032	A1CF	100	93.478	Colobus_angolensis_palliatus
ENSMICG00000003377	A1CF	100	91.806	ENSCGRG00001017413	A1cf	100	91.639	Cricetulus_griseus_chok1gshd
ENSMICG00000003377	A1CF	100	91.472	ENSCGRG00000017332	A1cf	100	91.806	Cricetulus_griseus_crigri
ENSMICG00000003377	A1CF	100	74.711	ENSCSEG00000002361	a1cf	100	74.215	Cynoglossus_semilaevis
ENSMICG00000003377	A1CF	100	75.822	ENSCVAG00000010520	a1cf	100	76.480	Cyprinodon_variegatus
ENSMICG00000003377	A1CF	100	78.859	ENSDARG00000002968	a1cf	100	79.362	Danio_rerio
ENSMICG00000003377	A1CF	100	92.809	ENSDNOG00000002829	A1CF	100	92.642	Dasypus_novemcinctus
ENSMICG00000003377	A1CF	82	92.754	ENSETEG00000012527	A1CF	84	90.378	Echinops_telfairi
ENSMICG00000003377	A1CF	100	94.482	ENSEASG00005012924	A1CF	100	94.482	Equus_asinus_asinus
ENSMICG00000003377	A1CF	100	94.147	ENSECAG00000010424	A1CF	100	94.147	Equus_caballus
ENSMICG00000003377	A1CF	78	80.303	ENSEEUG00000000013	A1CF	96	82.086	Erinaceus_europaeus
ENSMICG00000003377	A1CF	100	77.980	ENSELUG00000003159	a1cf	100	77.649	Esox_lucius
ENSMICG00000003377	A1CF	100	92.881	ENSFCAG00000011179	A1CF	100	93.051	Felis_catus
ENSMICG00000003377	A1CF	100	86.464	ENSFALG00000013183	A1CF	100	86.294	Ficedula_albicollis
ENSMICG00000003377	A1CF	100	94.237	ENSFDAG00000019371	A1CF	100	93.729	Fukomys_damarensis
ENSMICG00000003377	A1CF	100	71.382	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSMICG00000003377	A1CF	100	70.279	ENSGMOG00000018943	a1cf	100	70.279	Gadus_morhua
ENSMICG00000003377	A1CF	99	84.433	ENSGALG00000003765	A1CF	99	84.264	Gallus_gallus
ENSMICG00000003377	A1CF	100	70.764	ENSGAFG00000014868	a1cf	100	70.930	Gambusia_affinis
ENSMICG00000003377	A1CF	100	73.443	ENSGACG00000010241	a1cf	100	72.787	Gasterosteus_aculeatus
ENSMICG00000003377	A1CF	96	86.783	ENSGAGG00000016508	A1CF	98	86.609	Gopherus_agassizii
ENSMICG00000003377	A1CF	100	94.314	ENSGGOG00000009670	A1CF	100	93.980	Gorilla_gorilla
ENSMICG00000003377	A1CF	100	76.442	ENSHBUG00000021959	a1cf	100	76.606	Haplochromis_burtoni
ENSMICG00000003377	A1CF	100	92.977	ENSHGLG00000008955	A1CF	100	92.977	Heterocephalus_glaber_female
ENSMICG00000003377	A1CF	100	92.308	ENSHGLG00100000518	A1CF	100	92.308	Heterocephalus_glaber_male
ENSMICG00000003377	A1CF	100	68.395	ENSHCOG00000017669	a1cf	100	70.388	Hippocampus_comes
ENSMICG00000003377	A1CF	88	81.157	ENSIPUG00000010367	a1cf	95	80.488	Ictalurus_punctatus
ENSMICG00000003377	A1CF	100	76.260	ENSKMAG00000006568	a1cf	100	76.098	Kryptolebias_marmoratus
ENSMICG00000003377	A1CF	99	75.000	ENSLBEG00000020994	a1cf	98	74.837	Labrus_bergylta
ENSMICG00000003377	A1CF	100	81.818	ENSLACG00000008061	A1CF	100	81.481	Latimeria_chalumnae
ENSMICG00000003377	A1CF	100	79.270	ENSLOCG00000006302	a1cf	100	79.104	Lepisosteus_oculatus
ENSMICG00000003377	A1CF	100	93.311	ENSLAFG00000015462	A1CF	100	93.144	Loxodonta_africana
ENSMICG00000003377	A1CF	100	96.271	ENSMFAG00000035948	A1CF	100	96.271	Macaca_fascicularis
ENSMICG00000003377	A1CF	100	96.271	ENSMMUG00000007077	A1CF	100	96.271	Macaca_mulatta
ENSMICG00000003377	A1CF	100	95.932	ENSMNEG00000031454	A1CF	100	95.932	Macaca_nemestrina
ENSMICG00000003377	A1CF	100	93.980	ENSMLEG00000037223	A1CF	100	93.478	Mandrillus_leucophaeus
ENSMICG00000003377	A1CF	100	75.702	ENSMAMG00000010402	a1cf	100	76.073	Mastacembelus_armatus
ENSMICG00000003377	A1CF	100	75.662	ENSMZEG00005013245	a1cf	100	74.793	Maylandia_zebra
ENSMICG00000003377	A1CF	100	85.833	ENSMGAG00000001507	A1CF	100	85.667	Meleagris_gallopavo
ENSMICG00000003377	A1CF	100	91.137	ENSMAUG00000007422	A1cf	100	91.137	Mesocricetus_auratus
ENSMICG00000003377	A1CF	100	91.806	ENSMOCG00000021536	A1cf	100	91.472	Microtus_ochrogaster
ENSMICG00000003377	A1CF	100	69.637	ENSMMOG00000009422	a1cf	100	69.307	Mola_mola
ENSMICG00000003377	A1CF	89	91.412	ENSMODG00000016478	A1CF	97	91.731	Monodelphis_domestica
ENSMICG00000003377	A1CF	100	73.277	ENSMALG00000012992	a1cf	100	71.933	Monopterus_albus
ENSMICG00000003377	A1CF	100	92.203	MGP_CAROLIEiJ_G0022873	A1cf	100	91.864	Mus_caroli
ENSMICG00000003377	A1CF	100	92.203	ENSMUSG00000052595	A1cf	99	95.276	Mus_musculus
ENSMICG00000003377	A1CF	100	92.034	MGP_PahariEiJ_G0014366	A1cf	100	91.356	Mus_pahari
ENSMICG00000003377	A1CF	100	91.695	MGP_SPRETEiJ_G0023792	A1cf	100	91.356	Mus_spretus
ENSMICG00000003377	A1CF	100	87.458	ENSMPUG00000016971	A1CF	100	87.625	Mustela_putorius_furo
ENSMICG00000003377	A1CF	100	92.977	ENSMLUG00000016071	A1CF	100	92.977	Myotis_lucifugus
ENSMICG00000003377	A1CF	100	92.642	ENSNGAG00000015136	A1cf	100	92.642	Nannospalax_galili
ENSMICG00000003377	A1CF	100	76.771	ENSNBRG00000001712	a1cf	100	76.936	Neolamprologus_brichardi
ENSMICG00000003377	A1CF	100	95.819	ENSNLEG00000012028	A1CF	100	95.819	Nomascus_leucogenys
ENSMICG00000003377	A1CF	94	89.247	ENSMEUG00000015909	A1CF	100	89.068	Notamacropus_eugenii
ENSMICG00000003377	A1CF	88	83.619	ENSOPRG00000010667	A1CF	97	83.491	Ochotona_princeps
ENSMICG00000003377	A1CF	100	77.100	ENSONIG00000019105	a1cf	100	76.442	Oreochromis_niloticus
ENSMICG00000003377	A1CF	77	89.760	ENSOANG00000007360	A1CF	99	89.760	Ornithorhynchus_anatinus
ENSMICG00000003377	A1CF	100	93.729	ENSOCUG00000011587	A1CF	100	93.729	Oryctolagus_cuniculus
ENSMICG00000003377	A1CF	100	73.008	ENSORLG00000013342	a1cf	100	71.659	Oryzias_latipes
ENSMICG00000003377	A1CF	100	74.188	ENSORLG00020000586	a1cf	100	73.377	Oryzias_latipes_hni
ENSMICG00000003377	A1CF	100	74.351	ENSORLG00015018569	a1cf	100	73.539	Oryzias_latipes_hsok
ENSMICG00000003377	A1CF	100	75.537	ENSOMEG00000013531	a1cf	100	74.545	Oryzias_melastigma
ENSMICG00000003377	A1CF	100	92.809	ENSOGAG00000012884	A1CF	100	92.809	Otolemur_garnettii
ENSMICG00000003377	A1CF	100	92.809	ENSOARG00000013695	A1CF	100	92.642	Ovis_aries
ENSMICG00000003377	A1CF	100	91.763	ENSPPAG00000028115	A1CF	100	95.951	Pan_paniscus
ENSMICG00000003377	A1CF	100	91.973	ENSPPRG00000012180	A1CF	100	92.140	Panthera_pardus
ENSMICG00000003377	A1CF	100	91.973	ENSPTIG00000021223	A1CF	100	92.140	Panthera_tigris_altaica
ENSMICG00000003377	A1CF	100	96.102	ENSPTRG00000002508	A1CF	100	96.102	Pan_troglodytes
ENSMICG00000003377	A1CF	100	96.271	ENSPANG00000021988	A1CF	100	96.271	Papio_anubis
ENSMICG00000003377	A1CF	100	78.146	ENSPKIG00000025176	a1cf	100	77.318	Paramormyrops_kingsleyae
ENSMICG00000003377	A1CF	100	87.479	ENSPSIG00000010318	A1CF	100	87.310	Pelodiscus_sinensis
ENSMICG00000003377	A1CF	98	66.093	ENSPMGG00000013359	a1cf	99	67.637	Periophthalmus_magnuspinnatus
ENSMICG00000003377	A1CF	100	92.642	ENSPEMG00000015021	A1cf	100	92.140	Peromyscus_maniculatus_bairdii
ENSMICG00000003377	A1CF	100	89.171	ENSPCIG00000002175	A1CF	100	89.002	Phascolarctos_cinereus
ENSMICG00000003377	A1CF	100	74.675	ENSPFOG00000007437	-	100	75.325	Poecilia_formosa
ENSMICG00000003377	A1CF	100	74.838	ENSPFOG00000006683	a1cf	100	75.487	Poecilia_formosa
ENSMICG00000003377	A1CF	100	75.658	ENSPLAG00000001210	-	100	76.316	Poecilia_latipinna
ENSMICG00000003377	A1CF	100	75.658	ENSPLAG00000000026	a1cf	100	76.316	Poecilia_latipinna
ENSMICG00000003377	A1CF	100	67.427	ENSPMEG00000015529	-	100	68.078	Poecilia_mexicana
ENSMICG00000003377	A1CF	100	68.317	ENSPMEG00000000921	a1cf	100	68.977	Poecilia_mexicana
ENSMICG00000003377	A1CF	100	74.513	ENSPREG00000016298	a1cf	100	75.162	Poecilia_reticulata
ENSMICG00000003377	A1CF	100	96.949	ENSPPYG00000002819	A1CF	100	96.949	Pongo_abelii
ENSMICG00000003377	A1CF	79	73.504	ENSPCAG00000006463	A1CF	79	73.291	Procavia_capensis
ENSMICG00000003377	A1CF	100	96.823	ENSPCOG00000024172	A1CF	100	96.823	Propithecus_coquereli
ENSMICG00000003377	A1CF	100	75.610	ENSPNYG00000017944	a1cf	100	75.772	Pundamilia_nyererei
ENSMICG00000003377	A1CF	100	81.040	ENSPNAG00000007704	a1cf	100	80.201	Pygocentrus_nattereri
ENSMICG00000003377	A1CF	100	92.373	ENSRNOG00000033195	A1cf	100	92.034	Rattus_norvegicus
ENSMICG00000003377	A1CF	100	87.667	ENSRBIG00000042892	A1CF	100	94.466	Rhinopithecus_bieti
ENSMICG00000003377	A1CF	100	94.983	ENSRROG00000041398	A1CF	99	96.050	Rhinopithecus_roxellana
ENSMICG00000003377	A1CF	100	95.485	ENSSBOG00000021930	A1CF	100	96.245	Saimiri_boliviensis_boliviensis
ENSMICG00000003377	A1CF	100	88.663	ENSSHAG00000005096	A1CF	100	88.494	Sarcophilus_harrisii
ENSMICG00000003377	A1CF	100	80.504	ENSSFOG00015011774	a1cf	100	79.664	Scleropages_formosus
ENSMICG00000003377	A1CF	100	74.513	ENSSMAG00000013271	a1cf	100	73.864	Scophthalmus_maximus
ENSMICG00000003377	A1CF	100	75.702	ENSSDUG00000013930	a1cf	100	74.876	Seriola_dumerili
ENSMICG00000003377	A1CF	100	71.333	ENSSLDG00000004290	a1cf	100	70.500	Seriola_lalandi_dorsalis
ENSMICG00000003377	A1CF	100	81.364	ENSSARG00000005940	A1CF	100	81.198	Sorex_araneus
ENSMICG00000003377	A1CF	99	83.833	ENSSPUG00000006797	A1CF	99	83.028	Sphenodon_punctatus
ENSMICG00000003377	A1CF	100	93.144	ENSSSCG00000010431	A1CF	100	92.977	Sus_scrofa
ENSMICG00000003377	A1CF	100	85.977	ENSTGUG00000005090	A1CF	100	85.977	Taeniopygia_guttata
ENSMICG00000003377	A1CF	100	73.539	ENSTRUG00000001982	a1cf	100	73.008	Takifugu_rubripes
ENSMICG00000003377	A1CF	100	73.906	ENSTNIG00000003580	a1cf	100	73.744	Tetraodon_nigroviridis
ENSMICG00000003377	A1CF	100	85.149	ENSTTRG00000013190	A1CF	100	84.983	Tursiops_truncatus
ENSMICG00000003377	A1CF	100	94.576	ENSUAMG00000020065	A1CF	100	94.407	Ursus_americanus
ENSMICG00000003377	A1CF	100	92.977	ENSUMAG00000011162	A1CF	100	92.809	Ursus_maritimus
ENSMICG00000003377	A1CF	87	90.253	ENSVPAG00000006130	A1CF	86	90.253	Vicugna_pacos
ENSMICG00000003377	A1CF	100	94.915	ENSVVUG00000002504	A1CF	100	94.915	Vulpes_vulpes
ENSMICG00000003377	A1CF	100	76.451	ENSXETG00000006611	a1cf	100	76.451	Xenopus_tropicalis
ENSMICG00000003377	A1CF	100	77.152	ENSXCOG00000003302	a1cf	100	77.318	Xiphophorus_couchianus
ENSMICG00000003377	A1CF	100	76.144	ENSXMAG00000016703	a1cf	100	76.307	Xiphophorus_maculatus