EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000003548 (Gene tree)
Gene ID: 105858110
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 18024 bases
Position: chr6:1696191-1714214
Accession: 105858110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000039582	tRNA-synt_1g	PF09334.11	7.3e-11	1	1
ENSMICP00000003236	Anticodon_1	PF08264.13	9.7e-35	1	1
ENSMICP00000039582	Anticodon_1	PF08264.13	5.8e-34	1	1
ENSMICP00000039582	tRNA-synt_1	PF00133.22	9e-201	1	1
ENSMICP00000003236	tRNA-synt_1	PF00133.22	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000051219	VARS-202	4091	XM_012740983	ENSMICP00000039582	1264 (aa)	XP_012596437	UPI0006437023
ENSMICT00000003556	VARS-201	4155	-	ENSMICP00000003236	402 (aa)	-	UPI00085B417A

Gene Model

Click here to download ENSMICG00000003548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000003548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000003548	VARS	70	54.134	ENSMICG00000005365	VARS2	92	55.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000003548	VARS	100	95.522	ENSG00000204394	VARS	100	97.126	Homo_sapiens
ENSMICG00000003548	VARS	98	64.715	ENSAPOG00000020691	vars	99	64.428	Acanthochromis_polyacanthus
ENSMICG00000003548	VARS	98	64.715	ENSAPOG00000020921	vars	99	64.428	Acanthochromis_polyacanthus
ENSMICG00000003548	VARS	100	94.030	ENSAMEG00000006417	VARS	100	93.597	Ailuropoda_melanoleuca
ENSMICG00000003548	VARS	100	65.255	ENSACIG00000013752	vars	100	65.463	Amphilophus_citrinellus
ENSMICG00000003548	VARS	100	64.724	ENSAOCG00000002447	vars	100	64.157	Amphiprion_ocellaris
ENSMICG00000003548	VARS	100	64.569	ENSAPEG00000010638	vars	99	64.798	Amphiprion_percula
ENSMICG00000003548	VARS	100	64.303	ENSATEG00000020219	vars	100	64.145	Anabas_testudineus
ENSMICG00000003548	VARS	89	61.389	ENSACAG00000017289	-	100	61.389	Anolis_carolinensis
ENSMICG00000003548	VARS	90	70.338	ENSACAG00000029133	-	99	70.685	Anolis_carolinensis
ENSMICG00000003548	VARS	100	95.771	ENSANAG00000015453	VARS	100	95.095	Aotus_nancymaae
ENSMICG00000003548	VARS	100	64.651	ENSACLG00000025699	vars	97	64.856	Astatotilapia_calliptera
ENSMICG00000003548	VARS	94	65.888	ENSAMXG00000017716	vars	95	65.888	Astyanax_mexicanus
ENSMICG00000003548	VARS	100	94.462	ENSBTAG00000005631	VARS	100	94.462	Bos_taurus
ENSMICG00000003548	VARS	100	95.522	ENSCJAG00000002604	VARS	100	95.016	Callithrix_jacchus
ENSMICG00000003548	VARS	100	94.030	ENSCAFG00000000636	VARS	100	92.959	Canis_familiaris
ENSMICG00000003548	VARS	94	92.905	ENSCAFG00020020790	VARS	98	91.344	Canis_lupus_dingo
ENSMICG00000003548	VARS	100	94.383	ENSCHIG00000011008	VARS	100	94.383	Capra_hircus
ENSMICG00000003548	VARS	100	94.937	ENSTSYG00000001567	VARS	100	94.937	Carlito_syrichta
ENSMICG00000003548	VARS	100	92.289	ENSCAPG00000013736	VARS	99	90.657	Cavia_aperea
ENSMICG00000003548	VARS	100	92.537	ENSCPOG00000000870	VARS	100	91.614	Cavia_porcellus
ENSMICG00000003548	VARS	100	95.771	ENSCCAG00000035656	VARS	100	95.771	Cebus_capucinus
ENSMICG00000003548	VARS	100	95.274	ENSCATG00000022394	VARS	100	94.699	Cercocebus_atys
ENSMICG00000003548	VARS	95	86.064	ENSCLAG00000009470	VARS	92	89.239	Chinchilla_lanigera
ENSMICG00000003548	VARS	100	95.771	ENSCSAG00000008784	VARS	100	94.937	Chlorocebus_sabaeus
ENSMICG00000003548	VARS	100	62.189	ENSCPBG00000007943	VARS	96	74.333	Chrysemys_picta_bellii
ENSMICG00000003548	VARS	100	95.522	ENSCANG00000033570	VARS	100	94.858	Colobus_angolensis_palliatus
ENSMICG00000003548	VARS	100	93.035	ENSCGRG00001005686	Vars	100	92.168	Cricetulus_griseus_chok1gshd
ENSMICG00000003548	VARS	100	93.035	ENSCGRG00000013352	Vars	78	86.935	Cricetulus_griseus_crigri
ENSMICG00000003548	VARS	100	64.348	ENSCSEG00000019652	vars	100	64.664	Cynoglossus_semilaevis
ENSMICG00000003548	VARS	100	65.190	ENSCVAG00000022398	vars	100	65.271	Cyprinodon_variegatus
ENSMICG00000003548	VARS	100	64.313	ENSDARG00000044575	vars	100	64.697	Danio_rerio
ENSMICG00000003548	VARS	73	89.420	ENSDNOG00000038678	-	100	89.420	Dasypus_novemcinctus
ENSMICG00000003548	VARS	100	93.532	ENSDORG00000016433	Vars	95	92.568	Dipodomys_ordii
ENSMICG00000003548	VARS	66	92.857	ENSETEG00000003824	VARS	76	87.138	Echinops_telfairi
ENSMICG00000003548	VARS	75	68.056	ENSEBUG00000007086	vars	84	69.459	Eptatretus_burgeri
ENSMICG00000003548	VARS	100	52.956	ENSEBUG00000004637	vars	100	61.676	Eptatretus_burgeri
ENSMICG00000003548	VARS	100	94.858	ENSEASG00005015673	VARS	100	94.858	Equus_asinus_asinus
ENSMICG00000003548	VARS	100	94.279	ENSECAG00000014620	VARS	100	94.625	Equus_caballus
ENSMICG00000003548	VARS	83	90.311	ENSEEUG00000004116	VARS	83	90.311	Erinaceus_europaeus
ENSMICG00000003548	VARS	100	64.302	ENSELUG00000006550	vars	97	64.379	Esox_lucius
ENSMICG00000003548	VARS	100	93.829	ENSFCAG00000004510	VARS	100	93.829	Felis_catus
ENSMICG00000003548	VARS	82	91.856	ENSFDAG00000011401	VARS	100	91.856	Fukomys_damarensis
ENSMICG00000003548	VARS	100	65.268	ENSFHEG00000010672	vars	100	65.349	Fundulus_heteroclitus
ENSMICG00000003548	VARS	100	61.520	ENSGMOG00000014908	vars	97	66.722	Gadus_morhua
ENSMICG00000003548	VARS	100	65.603	ENSGAFG00000021630	vars	100	65.683	Gambusia_affinis
ENSMICG00000003548	VARS	100	58.374	ENSGACG00000009601	vars	98	65.583	Gasterosteus_aculeatus
ENSMICG00000003548	VARS	50	64.613	ENSGAGG00000006508	-	91	63.823	Gopherus_agassizii
ENSMICG00000003548	VARS	84	78.788	ENSGAGG00000006067	-	96	78.788	Gopherus_agassizii
ENSMICG00000003548	VARS	100	95.771	ENSGGOG00000011364	VARS	100	95.174	Gorilla_gorilla
ENSMICG00000003548	VARS	100	64.574	ENSHBUG00000017151	vars	97	64.779	Haplochromis_burtoni
ENSMICG00000003548	VARS	100	91.045	ENSHGLG00000011646	VARS	100	90.981	Heterocephalus_glaber_female
ENSMICG00000003548	VARS	100	85.714	ENSHGLG00100018062	VARS	100	83.223	Heterocephalus_glaber_male
ENSMICG00000003548	VARS	99	64.596	ENSHCOG00000012198	vars	99	64.880	Hippocampus_comes
ENSMICG00000003548	VARS	100	64.825	ENSIPUG00000005218	vars	100	64.825	Ictalurus_punctatus
ENSMICG00000003548	VARS	100	95.274	ENSSTOG00000013112	VARS	100	94.150	Ictidomys_tridecemlineatus
ENSMICG00000003548	VARS	100	78.109	ENSJJAG00000015343	-	100	72.231	Jaculus_jaculus
ENSMICG00000003548	VARS	100	91.045	ENSJJAG00000019749	-	100	90.744	Jaculus_jaculus
ENSMICG00000003548	VARS	100	65.166	ENSKMAG00000009455	vars	100	65.324	Kryptolebias_marmoratus
ENSMICG00000003548	VARS	100	64.269	ENSLBEG00000010341	vars	100	64.269	Labrus_bergylta
ENSMICG00000003548	VARS	94	61.791	ENSLACG00000015232	VARS	99	62.377	Latimeria_chalumnae
ENSMICG00000003548	VARS	100	66.094	ENSLOCG00000004240	vars	100	66.511	Lepisosteus_oculatus
ENSMICG00000003548	VARS	100	93.038	ENSLAFG00000023090	VARS	100	93.354	Loxodonta_africana
ENSMICG00000003548	VARS	100	95.522	ENSMFAG00000001032	VARS	100	94.937	Macaca_fascicularis
ENSMICG00000003548	VARS	100	95.522	ENSMMUG00000006828	VARS	100	94.937	Macaca_mulatta
ENSMICG00000003548	VARS	100	95.771	ENSMNEG00000042072	VARS	100	94.937	Macaca_nemestrina
ENSMICG00000003548	VARS	100	95.771	ENSMLEG00000039307	VARS	100	94.858	Mandrillus_leucophaeus
ENSMICG00000003548	VARS	100	64.514	ENSMAMG00000003949	vars	100	64.977	Mastacembelus_armatus
ENSMICG00000003548	VARS	100	64.496	ENSMZEG00005018327	vars	100	64.009	Maylandia_zebra
ENSMICG00000003548	VARS	100	92.537	ENSMAUG00000006715	Vars	100	91.930	Mesocricetus_auratus
ENSMICG00000003548	VARS	100	93.035	ENSMOCG00000015404	Vars	100	89.715	Microtus_ochrogaster
ENSMICG00000003548	VARS	100	64.072	ENSMMOG00000015801	vars	100	63.915	Mola_mola
ENSMICG00000003548	VARS	100	86.788	ENSMODG00000015204	-	100	86.788	Monodelphis_domestica
ENSMICG00000003548	VARS	84	61.404	ENSMODG00000001325	-	98	61.404	Monodelphis_domestica
ENSMICG00000003548	VARS	99	64.516	ENSMALG00000022532	vars	99	64.460	Monopterus_albus
ENSMICG00000003548	VARS	100	94.527	MGP_CAROLIEiJ_G0021491	Vars	100	92.642	Mus_caroli
ENSMICG00000003548	VARS	100	94.030	ENSMUSG00000007029	Vars	100	92.484	Mus_musculus
ENSMICG00000003548	VARS	100	93.532	MGP_PahariEiJ_G0020486	Vars	100	92.247	Mus_pahari
ENSMICG00000003548	VARS	100	94.279	MGP_SPRETEiJ_G0022396	Vars	100	92.563	Mus_spretus
ENSMICG00000003548	VARS	100	94.279	ENSMPUG00000010821	VARS	100	94.225	Mustela_putorius_furo
ENSMICG00000003548	VARS	78	92.206	ENSMLUG00000013126	VARS	100	93.117	Myotis_lucifugus
ENSMICG00000003548	VARS	100	93.781	ENSNGAG00000012151	Vars	100	92.484	Nannospalax_galili
ENSMICG00000003548	VARS	100	64.341	ENSNBRG00000020520	vars	100	64.546	Neolamprologus_brichardi
ENSMICG00000003548	VARS	100	95.522	ENSNLEG00000006351	VARS	100	94.858	Nomascus_leucogenys
ENSMICG00000003548	VARS	100	83.149	ENSMEUG00000011378	VARS	100	83.149	Notamacropus_eugenii
ENSMICG00000003548	VARS	100	92.722	ENSOPRG00000003607	VARS	100	92.722	Ochotona_princeps
ENSMICG00000003548	VARS	100	92.040	ENSODEG00000017681	VARS	100	90.981	Octodon_degus
ENSMICG00000003548	VARS	100	64.973	ENSONIG00000013064	vars	99	68.142	Oreochromis_niloticus
ENSMICG00000003548	VARS	77	78.791	ENSOANG00000005400	VARS	98	78.436	Ornithorhynchus_anatinus
ENSMICG00000003548	VARS	100	92.786	ENSOCUG00000022463	VARS	100	90.837	Oryctolagus_cuniculus
ENSMICG00000003548	VARS	100	64.052	ENSORLG00000013063	vars	100	64.395	Oryzias_latipes
ENSMICG00000003548	VARS	100	64.688	ENSORLG00020003504	vars	100	64.769	Oryzias_latipes_hni
ENSMICG00000003548	VARS	100	64.738	ENSORLG00015009001	vars	100	64.665	Oryzias_latipes_hsok
ENSMICG00000003548	VARS	100	64.583	ENSOMEG00000015016	vars	100	64.665	Oryzias_melastigma
ENSMICG00000003548	VARS	100	95.025	ENSOGAG00000007515	VARS	100	94.304	Otolemur_garnettii
ENSMICG00000003548	VARS	100	96.020	ENSPPAG00000034012	VARS	100	95.491	Pan_paniscus
ENSMICG00000003548	VARS	100	94.030	ENSPPRG00000014855	VARS	100	93.908	Panthera_pardus
ENSMICG00000003548	VARS	85	93.680	ENSPTIG00000010462	VARS	95	93.761	Panthera_tigris_altaica
ENSMICG00000003548	VARS	100	95.771	ENSPTRG00000017985	VARS	100	95.411	Pan_troglodytes
ENSMICG00000003548	VARS	100	95.771	ENSPANG00000014565	VARS	100	93.454	Papio_anubis
ENSMICG00000003548	VARS	100	63.134	ENSPKIG00000016304	vars	100	63.287	Paramormyrops_kingsleyae
ENSMICG00000003548	VARS	100	65.931	ENSPMGG00000023909	vars	100	66.246	Periophthalmus_magnuspinnatus
ENSMICG00000003548	VARS	100	93.284	ENSPEMG00000006639	Vars	100	93.038	Peromyscus_maniculatus_bairdii
ENSMICG00000003548	VARS	100	86.234	ENSPCIG00000018553	VARS	100	86.234	Phascolarctos_cinereus
ENSMICG00000003548	VARS	100	65.914	ENSPFOG00000015690	vars	100	65.994	Poecilia_formosa
ENSMICG00000003548	VARS	100	66.090	ENSPLAG00000009590	vars	100	66.090	Poecilia_latipinna
ENSMICG00000003548	VARS	100	65.914	ENSPMEG00000004708	vars	100	65.994	Poecilia_mexicana
ENSMICG00000003548	VARS	100	63.950	ENSPREG00000013264	vars	100	64.044	Poecilia_reticulata
ENSMICG00000003548	VARS	100	93.434	ENSPPYG00000016460	VARS	100	93.434	Pongo_abelii
ENSMICG00000003548	VARS	100	91.045	ENSPCAG00000013565	VARS	86	91.741	Procavia_capensis
ENSMICG00000003548	VARS	100	97.075	ENSPCOG00000010942	VARS	100	97.075	Propithecus_coquereli
ENSMICG00000003548	VARS	100	91.542	ENSPVAG00000012403	VARS	100	90.348	Pteropus_vampyrus
ENSMICG00000003548	VARS	100	64.574	ENSPNYG00000022511	vars	100	64.779	Pundamilia_nyererei
ENSMICG00000003548	VARS	100	64.783	ENSPNAG00000020962	vars	100	64.788	Pygocentrus_nattereri
ENSMICG00000003548	VARS	100	93.532	ENSRNOG00000000867	Vars	100	92.801	Rattus_norvegicus
ENSMICG00000003548	VARS	100	95.771	ENSRBIG00000041669	VARS	100	95.016	Rhinopithecus_bieti
ENSMICG00000003548	VARS	100	95.771	ENSRROG00000045490	VARS	100	95.016	Rhinopithecus_roxellana
ENSMICG00000003548	VARS	100	95.522	ENSSBOG00000035402	VARS	100	94.699	Saimiri_boliviensis_boliviensis
ENSMICG00000003548	VARS	100	82.090	ENSSHAG00000006937	VARS	100	81.854	Sarcophilus_harrisii
ENSMICG00000003548	VARS	100	64.479	ENSSFOG00015014272	vars	98	71.834	Scleropages_formosus
ENSMICG00000003548	VARS	100	63.158	ENSSMAG00000009596	vars	99	63.460	Scophthalmus_maximus
ENSMICG00000003548	VARS	100	64.241	ENSSDUG00000014177	vars	100	64.391	Seriola_dumerili
ENSMICG00000003548	VARS	100	64.009	ENSSLDG00000025316	vars	100	64.214	Seriola_lalandi_dorsalis
ENSMICG00000003548	VARS	100	64.646	ENSSPAG00000017068	vars	100	64.953	Stegastes_partitus
ENSMICG00000003548	VARS	100	92.648	ENSSSCG00000038950	VARS	100	93.360	Sus_scrofa
ENSMICG00000003548	VARS	82	64.046	ENSTRUG00000012307	vars	98	63.723	Takifugu_rubripes
ENSMICG00000003548	VARS	85	51.320	ENSTRUG00000002238	-	99	51.613	Takifugu_rubripes
ENSMICG00000003548	VARS	100	64.163	ENSTNIG00000008011	vars	100	64.448	Tetraodon_nigroviridis
ENSMICG00000003548	VARS	53	95.131	ENSTBEG00000004728	-	60	95.131	Tupaia_belangeri
ENSMICG00000003548	VARS	100	93.284	ENSTTRG00000014128	VARS	100	85.680	Tursiops_truncatus
ENSMICG00000003548	VARS	100	93.366	ENSUAMG00000010424	VARS	100	90.409	Ursus_americanus
ENSMICG00000003548	VARS	100	85.217	ENSUMAG00000013486	VARS	100	85.296	Ursus_maritimus
ENSMICG00000003548	VARS	100	93.284	ENSVVUG00000021323	VARS	100	92.806	Vulpes_vulpes
ENSMICG00000003548	VARS	100	59.701	ENSXETG00000024076	vars	98	62.298	Xenopus_tropicalis
ENSMICG00000003548	VARS	100	65.827	ENSXCOG00000019172	vars	100	65.907	Xiphophorus_couchianus
ENSMICG00000003548	VARS	100	65.447	ENSXMAG00000010927	vars	100	65.528	Xiphophorus_maculatus