EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000003952 (Gene tree)
Gene ID: 105866705
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 106461 bases
Position: chr16:4468500-4574960
Accession: 105866705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000046908	Ago_hook	PF10427.9	2.9e-23	1	1
ENSMICP00000049412	Ago_hook	PF10427.9	2.9e-23	1	1
ENSMICP00000043361	Ago_hook	PF10427.9	9.8e-23	1	1
ENSMICP00000003606	Ago_hook	PF10427.9	1.9e-22	1	1
ENSMICP00000043361	RRM_1	PF00076.22	0.00029	1	1
ENSMICP00000046908	RRM_1	PF00076.22	0.0003	1	1
ENSMICP00000049412	RRM_1	PF00076.22	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000003958	TNRC6C-203	5823	XM_012756220	ENSMICP00000003606	1940 (aa)	XP_012611674	UPI000C2EA7CE
ENSMICT00000063538	TNRC6C-201	8293	XM_012756228	ENSMICP00000049412	1724 (aa)	XP_012611682	UPI000C2EB407
ENSMICT00000064264	TNRC6C-202	7646	-	ENSMICP00000043361	1688 (aa)	-	UPI000C2EBAF7
ENSMICT00000064242	TNRC6C-204	5784	XM_012756227	ENSMICP00000046908	1724 (aa)	XP_012611681	UPI000C2EB407

Gene Model

Click here to download ENSMICG00000003952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000003952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000003952	TNRC6C	99	44.187	ENSMICG00000030685	TNRC6A	98	41.768
ENSMICG00000003952	TNRC6C	98	37.786	ENSMICG00000014056	TNRC6B	89	53.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000003952	TNRC6C	100	94.322	ENSG00000078687	TNRC6C	100	94.737	Homo_sapiens
ENSMICG00000003952	TNRC6C	80	55.229	ENSAPOG00000019749	tnrc6c1	98	49.181	Acanthochromis_polyacanthus
ENSMICG00000003952	TNRC6C	100	89.891	ENSAMEG00000013756	TNRC6C	99	89.682	Ailuropoda_melanoleuca
ENSMICG00000003952	TNRC6C	94	49.850	ENSACIG00000008075	tnrc6c1	79	53.650	Amphilophus_citrinellus
ENSMICG00000003952	TNRC6C	80	64.502	ENSAOCG00000023968	tnrc6c1	99	49.101	Amphiprion_ocellaris
ENSMICG00000003952	TNRC6C	80	54.558	ENSAPEG00000009020	tnrc6c1	99	48.998	Amphiprion_percula
ENSMICG00000003952	TNRC6C	100	87.156	ENSAPLG00000005456	TNRC6C	100	86.784	Anas_platyrhynchos
ENSMICG00000003952	TNRC6C	100	87.898	ENSACAG00000016198	TNRC6C	98	87.233	Anolis_carolinensis
ENSMICG00000003952	TNRC6C	100	93.546	ENSANAG00000021554	TNRC6C	100	93.961	Aotus_nancymaae
ENSMICG00000003952	TNRC6C	100	49.446	ENSACLG00000000424	tnrc6c1	99	47.847	Astatotilapia_calliptera
ENSMICG00000003952	TNRC6C	100	89.309	ENSBTAG00000018658	TNRC6C	100	89.604	Bos_taurus
ENSMICG00000003952	TNRC6C	100	93.783	ENSCJAG00000019431	TNRC6C	100	93.902	Callithrix_jacchus
ENSMICG00000003952	TNRC6C	100	91.372	ENSCAFG00000005224	TNRC6C	99	91.103	Canis_familiaris
ENSMICG00000003952	TNRC6C	100	91.009	ENSCAFG00020006661	TNRC6C	99	91.497	Canis_lupus_dingo
ENSMICG00000003952	TNRC6C	100	88.462	ENSCHIG00000026004	TNRC6C	100	87.000	Capra_hircus
ENSMICG00000003952	TNRC6C	100	94.551	ENSTSYG00000005403	TNRC6C	100	94.667	Carlito_syrichta
ENSMICG00000003952	TNRC6C	100	85.109	ENSCAPG00000007307	TNRC6C	99	84.180	Cavia_aperea
ENSMICG00000003952	TNRC6C	100	90.527	ENSCPOG00000000467	TNRC6C	100	88.671	Cavia_porcellus
ENSMICG00000003952	TNRC6C	100	94.145	ENSCCAG00000030524	TNRC6C	100	94.261	Cebus_capucinus
ENSMICG00000003952	TNRC6C	100	94.203	ENSCATG00000033135	TNRC6C	100	94.319	Cercocebus_atys
ENSMICG00000003952	TNRC6C	100	93.250	ENSCLAG00000011139	TNRC6C	99	90.573	Chinchilla_lanigera
ENSMICG00000003952	TNRC6C	100	94.261	ENSCSAG00000005167	TNRC6C	99	93.958	Chlorocebus_sabaeus
ENSMICG00000003952	TNRC6C	75	91.892	ENSCHOG00000000088	TNRC6C	72	90.851	Choloepus_hoffmanni
ENSMICG00000003952	TNRC6C	100	87.766	ENSCPBG00000027960	TNRC6C	100	88.298	Chrysemys_picta_bellii
ENSMICG00000003952	TNRC6C	100	94.029	ENSCANG00000041771	TNRC6C	100	94.145	Colobus_angolensis_palliatus
ENSMICG00000003952	TNRC6C	100	90.572	ENSCGRG00001022686	Tnrc6c	100	89.452	Cricetulus_griseus_chok1gshd
ENSMICG00000003952	TNRC6C	100	91.001	ENSCGRG00000018041	Tnrc6c	100	89.452	Cricetulus_griseus_crigri
ENSMICG00000003952	TNRC6C	100	47.978	ENSCSEG00000012744	tnrc6c1	98	42.921	Cynoglossus_semilaevis
ENSMICG00000003952	TNRC6C	100	54.628	ENSDARG00000076847	tnrc6c1	99	54.016	Danio_rerio
ENSMICG00000003952	TNRC6C	100	91.035	ENSDNOG00000003247	TNRC6C	99	89.080	Dasypus_novemcinctus
ENSMICG00000003952	TNRC6C	100	86.808	ENSDORG00000004558	Tnrc6c	100	86.808	Dipodomys_ordii
ENSMICG00000003952	TNRC6C	90	82.870	ENSETEG00000005527	TNRC6C	87	82.870	Echinops_telfairi
ENSMICG00000003952	TNRC6C	100	91.538	ENSEASG00005004799	TNRC6C	100	91.657	Equus_asinus_asinus
ENSMICG00000003952	TNRC6C	100	91.657	ENSECAG00000012486	TNRC6C	99	90.919	Equus_caballus
ENSMICG00000003952	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.047	Erinaceus_europaeus
ENSMICG00000003952	TNRC6C	100	89.663	ENSFCAG00000028358	TNRC6C	100	89.841	Felis_catus
ENSMICG00000003952	TNRC6C	100	87.174	ENSFALG00000000848	TNRC6C	100	86.549	Ficedula_albicollis
ENSMICG00000003952	TNRC6C	100	92.007	ENSFDAG00000010368	TNRC6C	100	89.736	Fukomys_damarensis
ENSMICG00000003952	TNRC6C	95	66.770	ENSFHEG00000002936	tnrc6c1	99	46.587	Fundulus_heteroclitus
ENSMICG00000003952	TNRC6C	100	88.986	ENSGALG00000001725	TNRC6C	100	88.869	Gallus_gallus
ENSMICG00000003952	TNRC6C	100	49.501	ENSGAFG00000019019	tnrc6c1	100	49.198	Gambusia_affinis
ENSMICG00000003952	TNRC6C	80	53.747	ENSGACG00000012320	tnrc6c1	97	47.458	Gasterosteus_aculeatus
ENSMICG00000003952	TNRC6C	100	87.449	ENSGAGG00000022043	TNRC6C	99	87.810	Gopherus_agassizii
ENSMICG00000003952	TNRC6C	100	93.627	ENSGGOG00000011304	TNRC6C	100	93.685	Gorilla_gorilla
ENSMICG00000003952	TNRC6C	100	49.582	ENSHBUG00000010846	tnrc6c1	100	47.862	Haplochromis_burtoni
ENSMICG00000003952	TNRC6C	100	92.718	ENSHGLG00000004809	TNRC6C	99	90.057	Heterocephalus_glaber_female
ENSMICG00000003952	TNRC6C	100	91.986	ENSHGLG00100012597	TNRC6C	99	90.265	Heterocephalus_glaber_male
ENSMICG00000003952	TNRC6C	100	53.591	ENSIPUG00000000818	tnrc6c1	98	51.436	Ictalurus_punctatus
ENSMICG00000003952	TNRC6C	100	91.302	ENSSTOG00000009101	TNRC6C	100	89.070	Ictidomys_tridecemlineatus
ENSMICG00000003952	TNRC6C	100	89.570	ENSJJAG00000017055	Tnrc6c	99	87.201	Jaculus_jaculus
ENSMICG00000003952	TNRC6C	100	49.711	ENSKMAG00000021023	tnrc6c1	100	50.115	Kryptolebias_marmoratus
ENSMICG00000003952	TNRC6C	100	76.174	ENSLACG00000015283	TNRC6C	100	74.847	Latimeria_chalumnae
ENSMICG00000003952	TNRC6C	100	56.380	ENSLOCG00000013377	tnrc6c1	99	56.128	Lepisosteus_oculatus
ENSMICG00000003952	TNRC6C	100	90.979	ENSLAFG00000011122	TNRC6C	99	89.526	Loxodonta_africana
ENSMICG00000003952	TNRC6C	100	94.319	ENSMFAG00000043943	TNRC6C	100	94.435	Macaca_fascicularis
ENSMICG00000003952	TNRC6C	100	94.319	ENSMMUG00000011924	TNRC6C	100	94.316	Macaca_mulatta
ENSMICG00000003952	TNRC6C	100	94.198	ENSMNEG00000030405	TNRC6C	100	94.316	Macaca_nemestrina
ENSMICG00000003952	TNRC6C	100	94.261	ENSMLEG00000033436	TNRC6C	100	94.377	Mandrillus_leucophaeus
ENSMICG00000003952	TNRC6C	94	54.830	ENSMAMG00000023613	tnrc6c1	100	50.390	Mastacembelus_armatus
ENSMICG00000003952	TNRC6C	100	49.446	ENSMZEG00005010920	tnrc6c1	99	47.847	Maylandia_zebra
ENSMICG00000003952	TNRC6C	100	80.630	ENSMGAG00000003906	TNRC6C	100	81.221	Meleagris_gallopavo
ENSMICG00000003952	TNRC6C	100	90.454	ENSMAUG00000021618	Tnrc6c	100	90.395	Mesocricetus_auratus
ENSMICG00000003952	TNRC6C	100	92.303	ENSMOCG00000015879	Tnrc6c	100	89.849	Microtus_ochrogaster
ENSMICG00000003952	TNRC6C	79	55.436	ENSMMOG00000005203	tnrc6c1	100	50.254	Mola_mola
ENSMICG00000003952	TNRC6C	100	87.066	ENSMODG00000001785	TNRC6C	99	85.187	Monodelphis_domestica
ENSMICG00000003952	TNRC6C	100	92.007	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	89.568	Mus_caroli
ENSMICG00000003952	TNRC6C	100	91.593	ENSMUSG00000025571	Tnrc6c	100	89.176	Mus_musculus
ENSMICG00000003952	TNRC6C	100	91.829	MGP_PahariEiJ_G0018593	Tnrc6c	100	89.456	Mus_pahari
ENSMICG00000003952	TNRC6C	100	91.652	MGP_SPRETEiJ_G0018309	Tnrc6c	100	89.232	Mus_spretus
ENSMICG00000003952	TNRC6C	100	89.455	ENSMPUG00000013348	TNRC6C	98	89.016	Mustela_putorius_furo
ENSMICG00000003952	TNRC6C	100	83.209	ENSMLUG00000014431	TNRC6C	98	82.604	Myotis_lucifugus
ENSMICG00000003952	TNRC6C	100	91.043	ENSNGAG00000012203	Tnrc6c	99	89.531	Nannospalax_galili
ENSMICG00000003952	TNRC6C	100	50.000	ENSNBRG00000005344	tnrc6c1	99	48.360	Neolamprologus_brichardi
ENSMICG00000003952	TNRC6C	100	91.402	ENSNLEG00000000047	TNRC6C	99	92.159	Nomascus_leucogenys
ENSMICG00000003952	TNRC6C	97	81.576	ENSMEUG00000005104	TNRC6C	98	91.209	Notamacropus_eugenii
ENSMICG00000003952	TNRC6C	100	92.599	ENSODEG00000012499	TNRC6C	100	92.895	Octodon_degus
ENSMICG00000003952	TNRC6C	94	51.946	ENSONIG00000002210	tnrc6c1	100	50.483	Oreochromis_niloticus
ENSMICG00000003952	TNRC6C	99	64.503	ENSOANG00000009758	-	100	61.827	Ornithorhynchus_anatinus
ENSMICG00000003952	TNRC6C	84	81.135	ENSOCUG00000006122	TNRC6C	95	77.978	Oryctolagus_cuniculus
ENSMICG00000003952	TNRC6C	91	50.000	ENSORLG00000009837	tnrc6c1	100	64.179	Oryzias_latipes
ENSMICG00000003952	TNRC6C	92	49.970	ENSORLG00020016510	tnrc6c1	100	48.082	Oryzias_latipes_hni
ENSMICG00000003952	TNRC6C	72	45.176	ENSORLG00015000171	tnrc6c1	98	43.867	Oryzias_latipes_hsok
ENSMICG00000003952	TNRC6C	92	50.571	ENSOMEG00000000357	tnrc6c1	99	47.656	Oryzias_melastigma
ENSMICG00000003952	TNRC6C	100	94.551	ENSOGAG00000007197	TNRC6C	100	94.261	Otolemur_garnettii
ENSMICG00000003952	TNRC6C	96	85.775	ENSOARG00000006041	TNRC6C	97	85.753	Ovis_aries
ENSMICG00000003952	TNRC6C	100	94.261	ENSPPAG00000027160	TNRC6C	100	94.377	Pan_paniscus
ENSMICG00000003952	TNRC6C	100	89.781	ENSPPRG00000018881	TNRC6C	100	89.959	Panthera_pardus
ENSMICG00000003952	TNRC6C	90	86.026	ENSPTIG00000008791	TNRC6C	90	85.271	Panthera_tigris_altaica
ENSMICG00000003952	TNRC6C	100	94.261	ENSPTRG00000009699	TNRC6C	100	94.377	Pan_troglodytes
ENSMICG00000003952	TNRC6C	100	94.020	ENSPANG00000019994	TNRC6C	100	94.139	Papio_anubis
ENSMICG00000003952	TNRC6C	93	63.834	ENSPKIG00000005428	tnrc6c1	100	50.803	Paramormyrops_kingsleyae
ENSMICG00000003952	TNRC6C	100	86.213	ENSPSIG00000018069	TNRC6C	100	84.107	Pelodiscus_sinensis
ENSMICG00000003952	TNRC6C	66	57.928	ENSPMGG00000022911	tnrc6c1	97	60.656	Periophthalmus_magnuspinnatus
ENSMICG00000003952	TNRC6C	100	91.397	ENSPEMG00000009785	Tnrc6c	99	89.688	Peromyscus_maniculatus_bairdii
ENSMICG00000003952	TNRC6C	58	85.436	ENSPCIG00000017421	-	99	86.111	Phascolarctos_cinereus
ENSMICG00000003952	TNRC6C	100	49.474	ENSPFOG00000012560	tnrc6c1	97	55.455	Poecilia_formosa
ENSMICG00000003952	TNRC6C	100	50.392	ENSPLAG00000021055	tnrc6c1	100	49.944	Poecilia_latipinna
ENSMICG00000003952	TNRC6C	100	94.493	ENSPPYG00000008679	TNRC6C	98	94.375	Pongo_abelii
ENSMICG00000003952	TNRC6C	93	92.891	ENSPCAG00000012510	TNRC6C	91	92.891	Procavia_capensis
ENSMICG00000003952	TNRC6C	100	98.493	ENSPCOG00000021451	TNRC6C	100	98.493	Propithecus_coquereli
ENSMICG00000003952	TNRC6C	96	89.453	ENSPVAG00000002008	TNRC6C	93	89.752	Pteropus_vampyrus
ENSMICG00000003952	TNRC6C	100	49.111	ENSPNYG00000014477	tnrc6c1	100	47.701	Pundamilia_nyererei
ENSMICG00000003952	TNRC6C	100	91.307	ENSRNOG00000022395	Tnrc6c	100	91.366	Rattus_norvegicus
ENSMICG00000003952	TNRC6C	100	94.319	ENSRBIG00000027777	TNRC6C	100	94.435	Rhinopithecus_bieti
ENSMICG00000003952	TNRC6C	100	94.377	ENSRROG00000042912	TNRC6C	100	94.493	Rhinopithecus_roxellana
ENSMICG00000003952	TNRC6C	100	93.797	ENSSBOG00000023981	TNRC6C	100	93.913	Saimiri_boliviensis_boliviensis
ENSMICG00000003952	TNRC6C	54	90.811	ENSSHAG00000018330	-	100	90.162	Sarcophilus_harrisii
ENSMICG00000003952	TNRC6C	92	56.994	ENSSFOG00015006475	tnrc6c1	99	51.301	Scleropages_formosus
ENSMICG00000003952	TNRC6C	62	56.230	ENSSFOG00015004735	-	99	59.580	Scleropages_formosus
ENSMICG00000003952	TNRC6C	100	48.975	ENSSMAG00000012761	tnrc6c1	99	50.373	Scophthalmus_maximus
ENSMICG00000003952	TNRC6C	100	50.715	ENSSDUG00000002366	tnrc6c1	99	49.102	Seriola_dumerili
ENSMICG00000003952	TNRC6C	100	49.168	ENSSLDG00000025613	tnrc6c1	100	49.612	Seriola_lalandi_dorsalis
ENSMICG00000003952	TNRC6C	91	90.086	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSMICG00000003952	TNRC6C	83	87.213	ENSSPUG00000007341	TNRC6C	98	87.283	Sphenodon_punctatus
ENSMICG00000003952	TNRC6C	79	53.836	ENSSPAG00000014977	tnrc6c1	97	48.621	Stegastes_partitus
ENSMICG00000003952	TNRC6C	97	90.722	ENSSSCG00000034373	TNRC6C	100	88.149	Sus_scrofa
ENSMICG00000003952	TNRC6C	100	88.698	ENSTGUG00000007733	TNRC6C	100	86.626	Taeniopygia_guttata
ENSMICG00000003952	TNRC6C	88	53.172	ENSTRUG00000011685	tnrc6c1	100	49.532	Takifugu_rubripes
ENSMICG00000003952	TNRC6C	88	53.483	ENSTNIG00000005273	tnrc6c1	100	60.588	Tetraodon_nigroviridis
ENSMICG00000003952	TNRC6C	64	91.016	ENSTBEG00000005046	TNRC6C	100	82.762	Tupaia_belangeri
ENSMICG00000003952	TNRC6C	100	91.603	ENSTTRG00000010828	TNRC6C	97	91.721	Tursiops_truncatus
ENSMICG00000003952	TNRC6C	100	89.234	ENSUMAG00000013614	TNRC6C	99	89.704	Ursus_maritimus
ENSMICG00000003952	TNRC6C	52	81.549	ENSVPAG00000006765	-	99	81.672	Vicugna_pacos
ENSMICG00000003952	TNRC6C	100	91.662	ENSVVUG00000015268	TNRC6C	100	91.839	Vulpes_vulpes
ENSMICG00000003952	TNRC6C	100	75.441	ENSXETG00000019470	tnrc6c	100	75.103	Xenopus_tropicalis
ENSMICG00000003952	TNRC6C	100	50.344	ENSXMAG00000025971	tnrc6c1	100	49.056	Xiphophorus_maculatus