EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000003971 (Gene tree)
Gene ID: 105881859
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 44357 bases
Position: chr14:58259111-58303467
Accession: 105881859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000003625	ResIII	PF04851.15	4.1e-11	1	1
ENSMICP00000020203	ResIII	PF04851.15	9.7e-11	1	1
ENSMICP00000003625	DEAD	PF00270.29	4.8e-06	1	1
ENSMICP00000020203	DEAD	PF00270.29	5.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000003979	SMARCA5-202	3003	-	ENSMICP00000003625	1000 (aa)	-	UPI000C2EC572
ENSMICT00000054354	SMARCA5-201	4826	XM_012783805	ENSMICP00000020203	1052 (aa)	XP_012639259	UPI000643998D

Gene Model

Click here to download ENSMICG00000003971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000003971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000003971	SMARCA5	99	84.561	ENSMICG00000015768	SMARCA1	93	85.772
ENSMICG00000003971	SMARCA5	50	42.750	ENSMICG00000016641	CHD6	72	41.162
ENSMICG00000003971	SMARCA5	57	42.957	ENSMICG00000002497	CHD1L	87	42.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000003971	SMARCA5	100	98.954	ENSG00000153147	SMARCA5	100	98.954	Homo_sapiens
ENSMICG00000003971	SMARCA5	100	99.049	ENSAMEG00000009585	SMARCA5	100	99.049	Ailuropoda_melanoleuca
ENSMICG00000003971	SMARCA5	97	95.306	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSMICG00000003971	SMARCA5	99	95.495	ENSACAG00000003038	SMARCA5	99	94.106	Anolis_carolinensis
ENSMICG00000003971	SMARCA5	100	98.859	ENSANAG00000019345	SMARCA5	100	98.859	Aotus_nancymaae
ENSMICG00000003971	SMARCA5	100	98.574	ENSBTAG00000003399	SMARCA5	100	98.574	Bos_taurus
ENSMICG00000003971	SMARCA5	100	99.049	ENSCJAG00000002735	SMARCA5	100	99.049	Callithrix_jacchus
ENSMICG00000003971	SMARCA5	100	98.859	ENSCAFG00000007525	SMARCA5	100	98.859	Canis_familiaris
ENSMICG00000003971	SMARCA5	98	98.837	ENSCAFG00020025641	SMARCA5	99	98.837	Canis_lupus_dingo
ENSMICG00000003971	SMARCA5	100	97.243	ENSCHIG00000016375	-	100	97.243	Capra_hircus
ENSMICG00000003971	SMARCA5	100	98.954	ENSCHIG00000013730	-	100	98.954	Capra_hircus
ENSMICG00000003971	SMARCA5	100	98.200	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSMICG00000003971	SMARCA5	97	97.536	ENSCAPG00000013747	SMARCA5	95	99.070	Cavia_aperea
ENSMICG00000003971	SMARCA5	100	98.004	ENSCPOG00000002259	SMARCA5	100	98.004	Cavia_porcellus
ENSMICG00000003971	SMARCA5	100	99.049	ENSCCAG00000027215	SMARCA5	100	99.049	Cebus_capucinus
ENSMICG00000003971	SMARCA5	100	99.049	ENSCATG00000044917	SMARCA5	100	99.049	Cercocebus_atys
ENSMICG00000003971	SMARCA5	99	97.798	ENSCLAG00000006153	SMARCA5	100	99.295	Chinchilla_lanigera
ENSMICG00000003971	SMARCA5	98	98.051	ENSCSAG00000003448	SMARCA5	100	99.690	Chlorocebus_sabaeus
ENSMICG00000003971	SMARCA5	91	98.405	ENSCHOG00000011724	SMARCA5	91	98.405	Choloepus_hoffmanni
ENSMICG00000003971	SMARCA5	99	96.700	ENSCPBG00000027535	SMARCA5	96	97.900	Chrysemys_picta_bellii
ENSMICG00000003971	SMARCA5	100	98.859	ENSCANG00000041629	SMARCA5	100	98.859	Colobus_angolensis_palliatus
ENSMICG00000003971	SMARCA5	99	98.004	ENSCGRG00001012719	Smarca5	99	98.004	Cricetulus_griseus_chok1gshd
ENSMICG00000003971	SMARCA5	99	97.898	ENSCGRG00000001417	Smarca5	99	99.396	Cricetulus_griseus_crigri
ENSMICG00000003971	SMARCA5	99	95.195	ENSDNOG00000009158	SMARCA5	97	95.976	Dasypus_novemcinctus
ENSMICG00000003971	SMARCA5	95	89.203	ENSDORG00000003466	Smarca5	97	90.823	Dipodomys_ordii
ENSMICG00000003971	SMARCA5	97	84.702	ENSEBUG00000014773	SMARCA5	96	85.847	Eptatretus_burgeri
ENSMICG00000003971	SMARCA5	100	99.240	ENSEASG00005001866	SMARCA5	100	99.240	Equus_asinus_asinus
ENSMICG00000003971	SMARCA5	100	99.240	ENSECAG00000002676	SMARCA5	100	99.240	Equus_caballus
ENSMICG00000003971	SMARCA5	99	93.493	ENSEEUG00000013176	SMARCA5	100	95.065	Erinaceus_europaeus
ENSMICG00000003971	SMARCA5	97	88.127	ENSELUG00000014653	SMARCA5	99	89.381	Esox_lucius
ENSMICG00000003971	SMARCA5	100	99.049	ENSFCAG00000004544	SMARCA5	100	99.049	Felis_catus
ENSMICG00000003971	SMARCA5	98	96.004	ENSFALG00000004987	SMARCA5	100	97.423	Ficedula_albicollis
ENSMICG00000003971	SMARCA5	100	97.900	ENSFDAG00000021016	SMARCA5	100	99.496	Fukomys_damarensis
ENSMICG00000003971	SMARCA5	98	87.996	ENSGMOG00000007519	SMARCA5	97	87.649	Gadus_morhua
ENSMICG00000003971	SMARCA5	99	96.200	ENSGALG00000009913	SMARCA5	98	96.275	Gallus_gallus
ENSMICG00000003971	SMARCA5	98	89.318	ENSGACG00000017238	SMARCA5	95	90.583	Gasterosteus_aculeatus
ENSMICG00000003971	SMARCA5	99	96.700	ENSGAGG00000019882	SMARCA5	96	98.000	Gopherus_agassizii
ENSMICG00000003971	SMARCA5	100	98.954	ENSGGOG00000012595	SMARCA5	100	98.954	Gorilla_gorilla
ENSMICG00000003971	SMARCA5	99	88.388	ENSHGLG00000000317	-	95	89.610	Heterocephalus_glaber_female
ENSMICG00000003971	SMARCA5	100	98.004	ENSHGLG00000000816	-	99	98.004	Heterocephalus_glaber_female
ENSMICG00000003971	SMARCA5	100	97.800	ENSHGLG00100018421	-	100	99.396	Heterocephalus_glaber_male
ENSMICG00000003971	SMARCA5	100	98.765	ENSSTOG00000010683	SMARCA5	99	98.765	Ictidomys_tridecemlineatus
ENSMICG00000003971	SMARCA5	100	97.624	ENSJJAG00000014965	Smarca5	100	97.624	Jaculus_jaculus
ENSMICG00000003971	SMARCA5	99	94.082	ENSLACG00000007091	SMARCA5	97	95.560	Latimeria_chalumnae
ENSMICG00000003971	SMARCA5	99	91.129	ENSLOCG00000008966	SMARCA5	98	90.963	Lepisosteus_oculatus
ENSMICG00000003971	SMARCA5	100	98.859	ENSLAFG00000007795	SMARCA5	100	98.859	Loxodonta_africana
ENSMICG00000003971	SMARCA5	100	99.049	ENSMFAG00000043649	SMARCA5	100	99.049	Macaca_fascicularis
ENSMICG00000003971	SMARCA5	100	99.049	ENSMMUG00000000829	SMARCA5	100	99.049	Macaca_mulatta
ENSMICG00000003971	SMARCA5	100	99.049	ENSMNEG00000031916	SMARCA5	100	99.049	Macaca_nemestrina
ENSMICG00000003971	SMARCA5	100	99.049	ENSMLEG00000042393	SMARCA5	100	99.049	Mandrillus_leucophaeus
ENSMICG00000003971	SMARCA5	99	96.200	ENSMGAG00000003517	SMARCA5	99	97.200	Meleagris_gallopavo
ENSMICG00000003971	SMARCA5	99	97.898	ENSMAUG00000015902	Smarca5	98	99.496	Mesocricetus_auratus
ENSMICG00000003971	SMARCA5	99	97.719	ENSMOCG00000016986	-	99	97.719	Microtus_ochrogaster
ENSMICG00000003971	SMARCA5	99	97.397	ENSMODG00000000391	SMARCA5	95	98.899	Monodelphis_domestica
ENSMICG00000003971	SMARCA5	100	97.909	ENSMUSG00000031715	Smarca5	100	97.909	Mus_musculus
ENSMICG00000003971	SMARCA5	100	98.099	MGP_PahariEiJ_G0022862	Smarca5	100	98.099	Mus_pahari
ENSMICG00000003971	SMARCA5	100	98.954	ENSMLUG00000000468	SMARCA5	100	98.954	Myotis_lucifugus
ENSMICG00000003971	SMARCA5	100	97.909	ENSNGAG00000000441	Smarca5	100	97.909	Nannospalax_galili
ENSMICG00000003971	SMARCA5	100	99.049	ENSNLEG00000005383	SMARCA5	100	99.049	Nomascus_leucogenys
ENSMICG00000003971	SMARCA5	97	89.733	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSMICG00000003971	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	87	98.429	Ochotona_princeps
ENSMICG00000003971	SMARCA5	98	97.436	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSMICG00000003971	SMARCA5	98	98.051	ENSOCUG00000013042	SMARCA5	100	99.690	Oryctolagus_cuniculus
ENSMICG00000003971	SMARCA5	100	99.525	ENSOGAG00000009702	SMARCA5	100	99.525	Otolemur_garnettii
ENSMICG00000003971	SMARCA5	99	98.668	ENSOARG00000010589	SMARCA5	99	98.668	Ovis_aries
ENSMICG00000003971	SMARCA5	100	98.764	ENSPPAG00000028523	SMARCA5	100	98.764	Pan_paniscus
ENSMICG00000003971	SMARCA5	99	92.292	ENSPPRG00000004925	SMARCA5	97	94.504	Panthera_pardus
ENSMICG00000003971	SMARCA5	99	98.198	ENSPTIG00000020959	SMARCA5	97	99.504	Panthera_tigris_altaica
ENSMICG00000003971	SMARCA5	100	98.859	ENSPTRG00000016472	SMARCA5	100	98.859	Pan_troglodytes
ENSMICG00000003971	SMARCA5	100	99.049	ENSPANG00000001175	SMARCA5	100	99.049	Papio_anubis
ENSMICG00000003971	SMARCA5	98	90.276	ENSPKIG00000015885	SMARCA5	100	91.443	Paramormyrops_kingsleyae
ENSMICG00000003971	SMARCA5	98	89.624	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSMICG00000003971	SMARCA5	99	94.500	ENSPSIG00000004177	SMARCA5	100	96.088	Pelodiscus_sinensis
ENSMICG00000003971	SMARCA5	97	88.957	ENSPMGG00000012316	SMARCA5	100	90.123	Periophthalmus_magnuspinnatus
ENSMICG00000003971	SMARCA5	99	97.898	ENSPEMG00000008060	Smarca5	99	97.544	Peromyscus_maniculatus_bairdii
ENSMICG00000003971	SMARCA5	65	85.162	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSMICG00000003971	SMARCA5	99	69.461	ENSPMAG00000006011	SMARCA5	82	84.301	Petromyzon_marinus
ENSMICG00000003971	SMARCA5	99	97.397	ENSPCIG00000003926	SMARCA5	95	98.899	Phascolarctos_cinereus
ENSMICG00000003971	SMARCA5	100	99.049	ENSPPYG00000015091	SMARCA5	100	99.049	Pongo_abelii
ENSMICG00000003971	SMARCA5	84	93.399	ENSPCAG00000014230	SMARCA5	88	90.783	Procavia_capensis
ENSMICG00000003971	SMARCA5	100	97.053	ENSPCOG00000026744	SMARCA5	100	97.053	Propithecus_coquereli
ENSMICG00000003971	SMARCA5	99	98.763	ENSPVAG00000006482	SMARCA5	100	98.763	Pteropus_vampyrus
ENSMICG00000003971	SMARCA5	99	88.778	ENSPNAG00000027824	SMARCA5	97	90.353	Pygocentrus_nattereri
ENSMICG00000003971	SMARCA5	99	97.698	ENSRNOG00000018149	Smarca5	100	99.296	Rattus_norvegicus
ENSMICG00000003971	SMARCA5	100	98.860	ENSRBIG00000044644	SMARCA5	100	98.860	Rhinopithecus_bieti
ENSMICG00000003971	SMARCA5	99	97.998	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSMICG00000003971	SMARCA5	100	98.859	ENSSBOG00000036257	SMARCA5	100	98.859	Saimiri_boliviensis_boliviensis
ENSMICG00000003971	SMARCA5	99	97.397	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSMICG00000003971	SMARCA5	99	89.638	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSMICG00000003971	SMARCA5	99	94.980	ENSSPUG00000007604	SMARCA5	99	96.382	Sphenodon_punctatus
ENSMICG00000003971	SMARCA5	100	98.574	ENSSSCG00000009047	SMARCA5	100	98.574	Sus_scrofa
ENSMICG00000003971	SMARCA5	99	95.400	ENSTGUG00000002408	SMARCA5	100	96.032	Taeniopygia_guttata
ENSMICG00000003971	SMARCA5	98	99.031	ENSUAMG00000023495	SMARCA5	99	99.031	Ursus_americanus
ENSMICG00000003971	SMARCA5	99	98.198	ENSUMAG00000015324	SMARCA5	97	99.501	Ursus_maritimus
ENSMICG00000003971	SMARCA5	100	98.574	ENSVPAG00000008982	SMARCA5	100	98.574	Vicugna_pacos
ENSMICG00000003971	SMARCA5	100	98.954	ENSVVUG00000017473	SMARCA5	100	98.954	Vulpes_vulpes
ENSMICG00000003971	SMARCA5	94	92.169	ENSXETG00000017566	smarca5	95	93.136	Xenopus_tropicalis