EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000003976 (Gene tree)
Gene ID: 105858240
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 18514 bases
Position: chr25:27559166-27577679
Accession: 105858240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000003624	RRM_1	PF00076.22	0.00015	1	1
ENSMICP00000044005	RRM_1	PF00076.22	0.00016	1	1
ENSMICP00000003624	G-patch	PF01585.23	7e-13	1	1
ENSMICP00000044005	G-patch	PF01585.23	7.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000064434	-	4421	XM_012741252	ENSMICP00000044005	405 (aa)	XP_012596706	UPI000989B4D9
ENSMICT00000003977	-	1194	-	ENSMICP00000003624	397 (aa)	-	UPI000C2EA1CE

Gene Model

Click here to download ENSMICG00000003976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000003976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000003976	-	100	91.932	ENSMICG00000041489	-	100	91.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000003976	-	100	97.778	ENSG00000134453	RBM17	100	99.057	Homo_sapiens
ENSMICG00000003976	-	99	82.310	ENSAPOG00000007101	rbm17	99	82.512	Acanthochromis_polyacanthus
ENSMICG00000003976	-	100	97.531	ENSAMEG00000002107	RBM17	100	97.531	Ailuropoda_melanoleuca
ENSMICG00000003976	-	100	78.818	ENSACIG00000006251	rbm17	100	78.818	Amphilophus_citrinellus
ENSMICG00000003976	-	100	82.439	ENSAOCG00000014892	rbm17	100	82.439	Amphiprion_ocellaris
ENSMICG00000003976	-	100	82.439	ENSAPEG00000022779	rbm17	100	82.439	Amphiprion_percula
ENSMICG00000003976	-	100	79.245	ENSATEG00000004406	rbm17	100	79.245	Anabas_testudineus
ENSMICG00000003976	-	100	94.815	ENSAPLG00000004190	RBM17	100	94.815	Anas_platyrhynchos
ENSMICG00000003976	-	89	89.730	ENSACAG00000005418	RBM17	99	90.000	Anolis_carolinensis
ENSMICG00000003976	-	100	98.025	ENSANAG00000030127	RBM17	100	98.025	Aotus_nancymaae
ENSMICG00000003976	-	100	84.040	ENSANAG00000019330	-	97	93.220	Aotus_nancymaae
ENSMICG00000003976	-	100	79.302	ENSACLG00000003928	rbm17	100	79.302	Astatotilapia_calliptera
ENSMICG00000003976	-	100	77.057	ENSAMXG00000005853	rbm17	100	79.800	Astyanax_mexicanus
ENSMICG00000003976	-	100	96.049	ENSBTAG00000011094	-	100	96.049	Bos_taurus
ENSMICG00000003976	-	100	97.531	ENSBTAG00000021951	RBM17	100	97.531	Bos_taurus
ENSMICG00000003976	-	74	34.323	WBGene00010233	F58B3.7	91	33.163	Caenorhabditis_elegans
ENSMICG00000003976	-	100	98.025	ENSCJAG00000020573	RBM17	100	98.025	Callithrix_jacchus
ENSMICG00000003976	-	100	97.531	ENSCAFG00000005206	RBM17	100	97.531	Canis_familiaris
ENSMICG00000003976	-	100	94.962	ENSCAFG00020005420	RBM17	100	94.962	Canis_lupus_dingo
ENSMICG00000003976	-	100	94.815	ENSCHIG00000019921	-	100	94.815	Capra_hircus
ENSMICG00000003976	-	100	97.531	ENSCHIG00000023204	-	100	97.531	Capra_hircus
ENSMICG00000003976	-	100	97.531	ENSTSYG00000001165	RBM17	100	97.531	Carlito_syrichta
ENSMICG00000003976	-	96	76.115	ENSCAPG00000006275	RBM17	100	80.387	Cavia_aperea
ENSMICG00000003976	-	100	94.059	ENSCPOG00000005679	RBM17	100	94.059	Cavia_porcellus
ENSMICG00000003976	-	100	98.025	ENSCCAG00000018655	RBM17	100	98.025	Cebus_capucinus
ENSMICG00000003976	-	100	97.778	ENSCATG00000041566	RBM17	100	97.778	Cercocebus_atys
ENSMICG00000003976	-	100	98.025	ENSCLAG00000012195	RBM17	99	98.025	Chinchilla_lanigera
ENSMICG00000003976	-	100	97.778	ENSCSAG00000013564	RBM17	100	97.778	Chlorocebus_sabaeus
ENSMICG00000003976	-	92	77.807	ENSCHOG00000005131	RBM17	100	77.807	Choloepus_hoffmanni
ENSMICG00000003976	-	100	93.333	ENSCPBG00000019836	RBM17	100	93.333	Chrysemys_picta_bellii
ENSMICG00000003976	-	100	47.343	ENSCSAVG00000008782	-	100	46.860	Ciona_savignyi
ENSMICG00000003976	-	98	83.838	ENSCANG00000023715	-	100	83.838	Colobus_angolensis_palliatus
ENSMICG00000003976	-	100	97.531	ENSCANG00000030987	RBM17	100	97.531	Colobus_angolensis_palliatus
ENSMICG00000003976	-	100	98.272	ENSCGRG00001013842	Rbm17	100	98.272	Cricetulus_griseus_chok1gshd
ENSMICG00000003976	-	100	75.062	ENSCGRG00001009256	-	100	74.074	Cricetulus_griseus_chok1gshd
ENSMICG00000003976	-	100	98.272	ENSCGRG00000006907	Rbm17	100	98.272	Cricetulus_griseus_crigri
ENSMICG00000003976	-	100	79.512	ENSCSEG00000018164	rbm17	100	79.810	Cynoglossus_semilaevis
ENSMICG00000003976	-	100	77.250	ENSCVAG00000002476	rbm17	100	77.500	Cyprinodon_variegatus
ENSMICG00000003976	-	100	78.118	ENSDARG00000031346	rbm17	100	78.118	Danio_rerio
ENSMICG00000003976	-	100	97.284	ENSDNOG00000035920	RBM17	100	97.284	Dasypus_novemcinctus
ENSMICG00000003976	-	99	36.044	FBgn0086683	Spf45	99	36.623	Drosophila_melanogaster
ENSMICG00000003976	-	88	96.244	ENSETEG00000006642	RBM17	87	96.244	Echinops_telfairi
ENSMICG00000003976	-	67	70.732	ENSEBUG00000010253	rbm17	87	70.732	Eptatretus_burgeri
ENSMICG00000003976	-	92	94.385	ENSEASG00005009236	-	100	94.385	Equus_asinus_asinus
ENSMICG00000003976	-	100	93.284	ENSEASG00005019205	-	100	93.284	Equus_asinus_asinus
ENSMICG00000003976	-	100	87.160	ENSECAG00000001379	-	100	87.160	Equus_caballus
ENSMICG00000003976	-	100	82.872	ENSECAG00000008939	RBM17	100	84.198	Equus_caballus
ENSMICG00000003976	-	86	79.598	ENSEEUG00000013077	RBM17	100	79.598	Erinaceus_europaeus
ENSMICG00000003976	-	100	77.546	ENSELUG00000006440	rbm17	100	77.546	Esox_lucius
ENSMICG00000003976	-	100	97.531	ENSFCAG00000031988	RBM17	100	97.531	Felis_catus
ENSMICG00000003976	-	100	93.333	ENSFALG00000001790	RBM17	100	93.333	Ficedula_albicollis
ENSMICG00000003976	-	100	98.025	ENSFDAG00000007470	RBM17	100	98.025	Fukomys_damarensis
ENSMICG00000003976	-	100	78.908	ENSFHEG00000001266	rbm17	100	78.554	Fundulus_heteroclitus
ENSMICG00000003976	-	99	75.772	ENSGMOG00000008438	rbm17	100	75.772	Gadus_morhua
ENSMICG00000003976	-	100	94.568	ENSGALG00000006332	RBM17	100	94.568	Gallus_gallus
ENSMICG00000003976	-	100	80.732	ENSGAFG00000019879	rbm17	100	80.732	Gambusia_affinis
ENSMICG00000003976	-	99	80.685	ENSGACG00000019174	rbm17	99	80.685	Gasterosteus_aculeatus
ENSMICG00000003976	-	100	93.333	ENSGAGG00000019906	RBM17	100	93.333	Gopherus_agassizii
ENSMICG00000003976	-	100	82.683	ENSHBUG00000016624	rbm17	100	82.683	Haplochromis_burtoni
ENSMICG00000003976	-	100	98.025	ENSHGLG00000011580	RBM17	100	98.025	Heterocephalus_glaber_female
ENSMICG00000003976	-	100	75.309	ENSHGLG00100010556	-	100	73.580	Heterocephalus_glaber_male
ENSMICG00000003976	-	100	98.025	ENSHGLG00100010460	RBM17	100	98.025	Heterocephalus_glaber_male
ENSMICG00000003976	-	99	78.282	ENSHCOG00000010865	rbm17	100	78.095	Hippocampus_comes
ENSMICG00000003976	-	100	78.220	ENSIPUG00000007699	Rbm17	100	78.220	Ictalurus_punctatus
ENSMICG00000003976	-	100	98.519	ENSSTOG00000013591	RBM17	100	98.519	Ictidomys_tridecemlineatus
ENSMICG00000003976	-	100	98.272	ENSJJAG00000022886	Rbm17	100	98.272	Jaculus_jaculus
ENSMICG00000003976	-	100	73.333	ENSJJAG00000000993	-	100	70.025	Jaculus_jaculus
ENSMICG00000003976	-	100	79.653	ENSKMAG00000021400	rbm17	100	79.104	Kryptolebias_marmoratus
ENSMICG00000003976	-	100	81.707	ENSLBEG00000000881	rbm17	100	79.245	Labrus_bergylta
ENSMICG00000003976	-	99	69.176	ENSLACG00000017297	RBM17	99	69.412	Latimeria_chalumnae
ENSMICG00000003976	-	100	85.784	ENSLOCG00000015659	rbm17	100	85.784	Lepisosteus_oculatus
ENSMICG00000003976	-	100	98.034	ENSLAFG00000011629	RBM17	100	98.034	Loxodonta_africana
ENSMICG00000003976	-	100	97.778	ENSMFAG00000035521	RBM17	100	97.778	Macaca_fascicularis
ENSMICG00000003976	-	100	97.778	ENSMMUG00000015152	RBM17	100	97.778	Macaca_mulatta
ENSMICG00000003976	-	100	97.778	ENSMNEG00000017264	RBM17	100	97.778	Macaca_nemestrina
ENSMICG00000003976	-	100	97.778	ENSMLEG00000029340	RBM17	100	97.778	Mandrillus_leucophaeus
ENSMICG00000003976	-	100	78.066	ENSMAMG00000000387	rbm17	100	78.066	Mastacembelus_armatus
ENSMICG00000003976	-	100	80.332	ENSMZEG00005015179	rbm17	100	80.332	Maylandia_zebra
ENSMICG00000003976	-	100	93.627	ENSMGAG00000003981	RBM17	100	93.627	Meleagris_gallopavo
ENSMICG00000003976	-	100	98.272	ENSMAUG00000019247	Rbm17	100	98.272	Mesocricetus_auratus
ENSMICG00000003976	-	93	80.000	ENSMOCG00000014517	-	99	80.000	Microtus_ochrogaster
ENSMICG00000003976	-	100	98.272	ENSMOCG00000011847	Rbm17	100	98.272	Microtus_ochrogaster
ENSMICG00000003976	-	100	75.061	ENSMMOG00000010264	rbm17	100	73.839	Mola_mola
ENSMICG00000003976	-	100	96.296	ENSMODG00000016648	RBM17	100	96.296	Monodelphis_domestica
ENSMICG00000003976	-	100	78.353	ENSMALG00000010597	rbm17	100	78.353	Monopterus_albus
ENSMICG00000003976	-	100	97.778	MGP_CAROLIEiJ_G0023173	Rbm17	100	97.778	Mus_caroli
ENSMICG00000003976	-	100	97.778	ENSMUSG00000037197	Rbm17	100	97.778	Mus_musculus
ENSMICG00000003976	-	100	97.531	MGP_PahariEiJ_G0019233	Rbm17	100	97.531	Mus_pahari
ENSMICG00000003976	-	100	97.778	MGP_SPRETEiJ_G0024091	Rbm17	100	97.778	Mus_spretus
ENSMICG00000003976	-	86	96.857	ENSMPUG00000016359	RBM17	97	96.857	Mustela_putorius_furo
ENSMICG00000003976	-	100	92.346	ENSMLUG00000025709	-	100	92.346	Myotis_lucifugus
ENSMICG00000003976	-	100	96.305	ENSMLUG00000002302	-	100	96.305	Myotis_lucifugus
ENSMICG00000003976	-	100	98.272	ENSNGAG00000000741	Rbm17	100	98.272	Nannospalax_galili
ENSMICG00000003976	-	100	68.148	ENSNGAG00000000663	-	100	67.734	Nannospalax_galili
ENSMICG00000003976	-	100	78.055	ENSNBRG00000018148	rbm17	100	78.055	Neolamprologus_brichardi
ENSMICG00000003976	-	100	97.778	ENSNLEG00000033350	RBM17	100	97.778	Nomascus_leucogenys
ENSMICG00000003976	-	100	90.617	ENSMEUG00000011347	RBM17	100	90.617	Notamacropus_eugenii
ENSMICG00000003976	-	100	84.444	ENSOPRG00000002993	RBM17	100	84.444	Ochotona_princeps
ENSMICG00000003976	-	100	97.291	ENSODEG00000004393	RBM17	100	97.291	Octodon_degus
ENSMICG00000003976	-	97	74.555	ENSODEG00000007286	-	99	74.555	Octodon_degus
ENSMICG00000003976	-	100	82.683	ENSONIG00000011838	rbm17	100	82.683	Oreochromis_niloticus
ENSMICG00000003976	-	100	95.556	ENSOANG00000015455	RBM17	100	95.556	Ornithorhynchus_anatinus
ENSMICG00000003976	-	100	79.953	ENSORLG00000028798	rbm17	100	80.000	Oryzias_latipes
ENSMICG00000003976	-	100	79.302	ENSORLG00020004593	rbm17	100	79.302	Oryzias_latipes_hni
ENSMICG00000003976	-	100	82.927	ENSORLG00015000033	rbm17	100	82.927	Oryzias_latipes_hsok
ENSMICG00000003976	-	100	78.538	ENSOMEG00000012060	rbm17	100	87.421	Oryzias_melastigma
ENSMICG00000003976	-	100	99.012	ENSOGAG00000015687	RBM17	100	99.012	Otolemur_garnettii
ENSMICG00000003976	-	100	97.531	ENSOARG00000012975	RBM17	100	97.531	Ovis_aries
ENSMICG00000003976	-	100	97.778	ENSPPAG00000032347	RBM17	100	97.778	Pan_paniscus
ENSMICG00000003976	-	100	97.531	ENSPPRG00000010706	RBM17	100	97.531	Panthera_pardus
ENSMICG00000003976	-	100	97.531	ENSPTIG00000007596	RBM17	100	97.531	Panthera_tigris_altaica
ENSMICG00000003976	-	100	97.778	ENSPTRG00000002265	RBM17	100	97.778	Pan_troglodytes
ENSMICG00000003976	-	100	97.778	ENSPANG00000023425	RBM17	100	97.778	Papio_anubis
ENSMICG00000003976	-	100	81.412	ENSPKIG00000025526	rbm17	100	81.221	Paramormyrops_kingsleyae
ENSMICG00000003976	-	100	77.934	ENSPKIG00000005048	-	100	77.934	Paramormyrops_kingsleyae
ENSMICG00000003976	-	100	92.157	ENSPSIG00000012332	RBM17	100	92.157	Pelodiscus_sinensis
ENSMICG00000003976	-	100	78.960	ENSPMGG00000007980	rbm17	100	78.960	Periophthalmus_magnuspinnatus
ENSMICG00000003976	-	100	98.272	ENSPEMG00000014320	Rbm17	100	98.272	Peromyscus_maniculatus_bairdii
ENSMICG00000003976	-	100	96.069	ENSPCIG00000019260	-	100	96.069	Phascolarctos_cinereus
ENSMICG00000003976	-	100	78.066	ENSPFOG00000013271	rbm17	100	78.774	Poecilia_formosa
ENSMICG00000003976	-	100	78.412	ENSPLAG00000004455	rbm17	100	79.404	Poecilia_latipinna
ENSMICG00000003976	-	100	81.463	ENSPMEG00000014864	rbm17	100	81.463	Poecilia_mexicana
ENSMICG00000003976	-	100	78.803	ENSPREG00000015589	rbm17	100	78.803	Poecilia_reticulata
ENSMICG00000003976	-	100	97.778	ENSPPYG00000002067	RBM17	100	97.778	Pongo_abelii
ENSMICG00000003976	-	81	69.725	ENSPPYG00000019042	-	100	69.419	Pongo_abelii
ENSMICG00000003976	-	99	70.968	ENSPPYG00000019881	-	100	70.720	Pongo_abelii
ENSMICG00000003976	-	100	89.630	ENSPCAG00000016879	RBM17	100	89.630	Procavia_capensis
ENSMICG00000003976	-	100	98.519	ENSPCOG00000027881	RBM17	100	98.519	Propithecus_coquereli
ENSMICG00000003976	-	100	86.667	ENSPVAG00000015499	RBM17	100	85.185	Pteropus_vampyrus
ENSMICG00000003976	-	100	76.131	ENSPNYG00000015274	rbm17	100	76.382	Pundamilia_nyererei
ENSMICG00000003976	-	100	79.765	ENSPNAG00000030046	rbm17	100	79.765	Pygocentrus_nattereri
ENSMICG00000003976	-	100	98.272	ENSRNOG00000018767	Rbm17	100	98.272	Rattus_norvegicus
ENSMICG00000003976	-	100	97.778	ENSRBIG00000043727	RBM17	100	97.778	Rhinopithecus_bieti
ENSMICG00000003976	-	100	97.778	ENSRROG00000044142	RBM17	100	97.778	Rhinopithecus_roxellana
ENSMICG00000003976	-	100	97.778	ENSSBOG00000031661	-	100	97.778	Saimiri_boliviensis_boliviensis
ENSMICG00000003976	-	100	87.192	ENSSBOG00000023653	-	100	87.192	Saimiri_boliviensis_boliviensis
ENSMICG00000003976	-	100	96.552	ENSSHAG00000012480	-	100	96.552	Sarcophilus_harrisii
ENSMICG00000003976	-	100	81.951	ENSSFOG00015009892	rbm17	100	81.951	Scleropages_formosus
ENSMICG00000003976	-	100	79.500	ENSSMAG00000012368	rbm17	100	78.392	Scophthalmus_maximus
ENSMICG00000003976	-	100	81.490	ENSSDUG00000015015	rbm17	100	81.490	Seriola_dumerili
ENSMICG00000003976	-	100	81.490	ENSSLDG00000014486	rbm17	100	81.490	Seriola_lalandi_dorsalis
ENSMICG00000003976	-	59	77.083	ENSSARG00000001792	-	100	77.083	Sorex_araneus
ENSMICG00000003976	-	99	93.812	ENSSPUG00000001036	RBM17	99	93.812	Sphenodon_punctatus
ENSMICG00000003976	-	100	82.195	ENSSPAG00000002338	rbm17	100	82.195	Stegastes_partitus
ENSMICG00000003976	-	100	97.284	ENSSSCG00000011134	RBM17	100	97.284	Sus_scrofa
ENSMICG00000003976	-	100	93.827	ENSTGUG00000002013	RBM17	100	93.827	Taeniopygia_guttata
ENSMICG00000003976	-	100	82.195	ENSTRUG00000010698	rbm17	100	82.195	Takifugu_rubripes
ENSMICG00000003976	-	100	82.927	ENSTNIG00000006892	rbm17	100	82.927	Tetraodon_nigroviridis
ENSMICG00000003976	-	100	76.296	ENSTBEG00000014686	RBM17	100	77.057	Tupaia_belangeri
ENSMICG00000003976	-	90	97.253	ENSTTRG00000001344	RBM17	100	97.253	Tursiops_truncatus
ENSMICG00000003976	-	100	95.718	ENSUAMG00000009499	RBM17	100	95.718	Ursus_americanus
ENSMICG00000003976	-	100	97.531	ENSUMAG00000012237	RBM17	100	97.531	Ursus_maritimus
ENSMICG00000003976	-	100	83.457	ENSVPAG00000005497	RBM17	100	83.457	Vicugna_pacos
ENSMICG00000003976	-	100	94.962	ENSVVUG00000006780	RBM17	100	94.962	Vulpes_vulpes
ENSMICG00000003976	-	99	84.938	ENSXETG00000018123	rbm17	100	84.938	Xenopus_tropicalis
ENSMICG00000003976	-	100	80.000	ENSXMAG00000008674	rbm17	100	80.732	Xiphophorus_maculatus