EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMICG00000004172 (Gene tree)
Gene ID
105868724
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Minus strand
Length
40792 bases
Position
chr5:3280358-3321149
Accession
105868724
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000019208PAT1PF09770.97.6e-1611
ENSMICP00000045452PAT1PF09770.91.3e-1511
ENSMICP00000003811PAT1PF09770.99.5e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000069497PATL1-2023584-ENSMICP00000045452644 (aa)-UPI000C2ED1CD
ENSMICT00000029979PATL1-2013694-ENSMICP00000019208717 (aa)-UPI00085B48CD
ENSMICT00000004179PATL1-2032358XM_012759817ENSMICP00000003811785 (aa)XP_012615271UPI000C2ED1D5
Gene Model
Click here to download ENSMICG00000004172's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004172's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000004172PATL16132.653ENSG00000229474PATL29934.426Homo_sapiens
ENSMICG00000004172PATL19899.051ENSG00000166889PATL19993.872Homo_sapiens
ENSMICG00000004172PATL16632.348ENSAPOG00000022988patl25933.178Acanthochromis_polyacanthus
ENSMICG00000004172PATL15248.317ENSAPOG00000021290patl19843.413Acanthochromis_polyacanthus
ENSMICG00000004172PATL19896.998ENSAMEG00000014215PATL19992.057Ailuropoda_melanoleuca
ENSMICG00000004172PATL16132.515ENSAMEG00000014997PATL27532.771Ailuropoda_melanoleuca
ENSMICG00000004172PATL19445.581ENSACIG00000005182patl19943.960Amphilophus_citrinellus
ENSMICG00000004172PATL18430.060ENSAOCG00000023738patl25232.719Amphiprion_ocellaris
ENSMICG00000004172PATL16432.157ENSAPEG00000011299patl26332.093Amphiprion_percula
ENSMICG00000004172PATL16065.000ENSAPEG00000021391patl18159.722Amphiprion_percula
ENSMICG00000004172PATL16232.277ENSATEG00000019567patl27031.621Anabas_testudineus
ENSMICG00000004172PATL18963.333ENSATEG00000002230patl18066.667Anabas_testudineus
ENSMICG00000004172PATL15234.375ENSAPLG00000003980PATL26434.375Anas_platyrhynchos
ENSMICG00000004172PATL17868.147ENSAPLG00000013394PATL19964.973Anas_platyrhynchos
ENSMICG00000004172PATL19881.517ENSACAG00000006607PATL19975.781Anolis_carolinensis
ENSMICG00000004172PATL19899.051ENSANAG00000023078PATL19993.742Aotus_nancymaae
ENSMICG00000004172PATL16066.667ENSACLG00000005144patl18447.573Astatotilapia_calliptera
ENSMICG00000004172PATL18531.059ENSACLG00000010326patl25433.173Astatotilapia_calliptera
ENSMICG00000004172PATL19840.735ENSAMXG00000010731patl19943.921Astyanax_mexicanus
ENSMICG00000004172PATL17432.997ENSAMXG00000020293patl26432.988Astyanax_mexicanus
ENSMICG00000004172PATL19897.946ENSBTAG00000005913PATL19991.927Bos_taurus
ENSMICG00000004172PATL16132.857ENSCJAG00000002379PATL27234.699Callithrix_jacchus
ENSMICG00000004172PATL19899.051ENSCJAG00000016192PATL19993.742Callithrix_jacchus
ENSMICG00000004172PATL16232.475ENSCAFG00000013629PATL27233.735Canis_familiaris
ENSMICG00000004172PATL19897.946ENSCAFG00000007581PATL19992.839Canis_familiaris
ENSMICG00000004172PATL19897.946ENSCAFG00020001648PATL110092.950Canis_lupus_dingo
ENSMICG00000004172PATL16232.200ENSCAFG00020022169PATL27233.735Canis_lupus_dingo
ENSMICG00000004172PATL16133.951ENSCHIG00000026665PATL27434.515Capra_hircus
ENSMICG00000004172PATL19895.735ENSCHIG00000025913PATL19990.625Capra_hircus
ENSMICG00000004172PATL19898.101ENSTSYG00000012748PATL19892.866Carlito_syrichta
ENSMICG00000004172PATL19892.114ENSCAPG00000013668PATL19986.996Cavia_aperea
ENSMICG00000004172PATL19890.184ENSCPOG00000006827PATL19985.515Cavia_porcellus
ENSMICG00000004172PATL19899.367ENSCCAG00000023759PATL19994.003Cebus_capucinus
ENSMICG00000004172PATL19898.892ENSCATG00000009629PATL19994.003Cercocebus_atys
ENSMICG00000004172PATL19793.780ENSCLAG00000003427PATL19988.714Chinchilla_lanigera
ENSMICG00000004172PATL15531.746ENSCLAG00000014407PATL27332.653Chinchilla_lanigera
ENSMICG00000004172PATL18698.923ENSCSAG00000006095PATL19993.497Chlorocebus_sabaeus
ENSMICG00000004172PATL16696.970ENSCHOG00000001611PATL18396.970Choloepus_hoffmanni
ENSMICG00000004172PATL15235.181ENSCPBG00000006150PATL26034.615Chrysemys_picta_bellii
ENSMICG00000004172PATL16132.653ENSCANG00000013856PATL27434.579Colobus_angolensis_palliatus
ENSMICG00000004172PATL19899.208ENSCANG00000039197PATL19999.127Colobus_angolensis_palliatus
ENSMICG00000004172PATL19896.994ENSCGRG00001024927Patl19992.438Cricetulus_griseus_chok1gshd
ENSMICG00000004172PATL19896.367ENSCGRG00000000461Patl19992.388Cricetulus_griseus_crigri
ENSMICG00000004172PATL15933.333ENSCSEG00000009438patl25832.944Cynoglossus_semilaevis
ENSMICG00000004172PATL18965.000ENSCSEG00000008261patl18153.488Cynoglossus_semilaevis
ENSMICG00000004172PATL18657.597ENSCVAG00000006664patl110044.051Cyprinodon_variegatus
ENSMICG00000004172PATL16833.393ENSDARG00000089567patl26233.333Danio_rerio
ENSMICG00000004172PATL19846.609ENSDARG00000017423patl110043.947Danio_rerio
ENSMICG00000004172PATL19789.331ENSDNOG00000038865PATL19888.704Dasypus_novemcinctus
ENSMICG00000004172PATL19897.627ENSDORG00000000237Patl19992.568Dipodomys_ordii
ENSMICG00000004172PATL19897.476ENSEASG00005007963PATL19992.328Equus_asinus_asinus
ENSMICG00000004172PATL19897.476ENSECAG00000011411PATL19992.198Equus_caballus
ENSMICG00000004172PATL16631.698ENSELUG00000023244patl25432.930Esox_lucius
ENSMICG00000004172PATL17377.419ENSELUG00000024249patl19943.192Esox_lucius
ENSMICG00000004172PATL16132.994ENSFCAG00000027170PATL27233.012Felis_catus
ENSMICG00000004172PATL19896.994ENSFCAG00000015573PATL19992.308Felis_catus
ENSMICG00000004172PATL19979.661ENSFALG00000012150PATL19975.623Ficedula_albicollis
ENSMICG00000004172PATL19731.446ENSFALG00000009768PATL25534.383Ficedula_albicollis
ENSMICG00000004172PATL19793.939ENSFDAG00000016128PATL19988.189Fukomys_damarensis
ENSMICG00000004172PATL15131.436ENSFDAG00000012242PATL27332.750Fukomys_damarensis
ENSMICG00000004172PATL16066.667ENSFHEG00000017790patl18358.333Fundulus_heteroclitus
ENSMICG00000004172PATL16030.515ENSGMOG00000005666patl29932.536Gadus_morhua
ENSMICG00000004172PATL110077.642ENSGALG00000042641PATL110074.413Gallus_gallus
ENSMICG00000004172PATL15234.917ENSGALG00000002167PATL25034.450Gallus_gallus
ENSMICG00000004172PATL16257.534ENSGAFG00000006508patl18457.534Gambusia_affinis
ENSMICG00000004172PATL18532.682ENSGAFG00000019344patl25534.783Gambusia_affinis
ENSMICG00000004172PATL19848.206ENSGACG00000016448patl19946.538Gasterosteus_aculeatus
ENSMICG00000004172PATL19885.512ENSGAGG00000004461PATL19979.856Gopherus_agassizii
ENSMICG00000004172PATL19899.051ENSGGOG00000004335PATL19993.872Gorilla_gorilla
ENSMICG00000004172PATL16132.311ENSGGOG00000025923PATL27333.958Gorilla_gorilla
ENSMICG00000004172PATL16032.292ENSHBUG00000005929patl26133.012Haplochromis_burtoni
ENSMICG00000004172PATL16066.667ENSHBUG00000005365patl18447.573Haplochromis_burtoni
ENSMICG00000004172PATL19894.620ENSHGLG00000018173PATL19989.179Heterocephalus_glaber_female
ENSMICG00000004172PATL19792.823ENSHGLG00100003453PATL19987.664Heterocephalus_glaber_male
ENSMICG00000004172PATL19930.208ENSHCOG00000016754patl25533.023Hippocampus_comes
ENSMICG00000004172PATL18965.000ENSHCOG00000001898patl18254.430Hippocampus_comes
ENSMICG00000004172PATL16632.336ENSIPUG00000020692patl25733.886Ictalurus_punctatus
ENSMICG00000004172PATL19698.065ENSSTOG00000013764PATL19993.377Ictidomys_tridecemlineatus
ENSMICG00000004172PATL15234.541ENSSTOG00000033848PATL27133.816Ictidomys_tridecemlineatus
ENSMICG00000004172PATL19796.645ENSJJAG00000010135Patl19992.116Jaculus_jaculus
ENSMICG00000004172PATL15233.333ENSKMAG00000021275patl25432.609Kryptolebias_marmoratus
ENSMICG00000004172PATL16061.667ENSKMAG00000020848patl18155.556Kryptolebias_marmoratus
ENSMICG00000004172PATL15933.546ENSLBEG00000022344patl25433.645Labrus_bergylta
ENSMICG00000004172PATL18968.333ENSLBEG00000023617patl18158.025Labrus_bergylta
ENSMICG00000004172PATL19657.962ENSLACG00000004640PATL19953.846Latimeria_chalumnae
ENSMICG00000004172PATL19631.176ENSLACG00000005291-7930.352Latimeria_chalumnae
ENSMICG00000004172PATL19846.965ENSLOCG00000000717patl19945.115Lepisosteus_oculatus
ENSMICG00000004172PATL19897.314ENSLAFG00000015161PATL19992.318Loxodonta_africana
ENSMICG00000004172PATL19898.892ENSMFAG00000040851PATL19994.003Macaca_fascicularis
ENSMICG00000004172PATL19898.892ENSMMUG00000017287PATL19994.003Macaca_mulatta
ENSMICG00000004172PATL19898.892ENSMNEG00000038692PATL19994.003Macaca_nemestrina
ENSMICG00000004172PATL19898.734ENSMLEG00000030044PATL19993.872Mandrillus_leucophaeus
ENSMICG00000004172PATL15932.484ENSMAMG00000013327patl26132.779Mastacembelus_armatus
ENSMICG00000004172PATL17677.419ENSMAMG00000003950patl19844.527Mastacembelus_armatus
ENSMICG00000004172PATL16066.667ENSMZEG00005013404patl18447.573Maylandia_zebra
ENSMICG00000004172PATL18531.059ENSMZEG00005014292patl25433.173Maylandia_zebra
ENSMICG00000004172PATL19976.923ENSMGAG00000003406PATL19972.765Meleagris_gallopavo
ENSMICG00000004172PATL18197.340ENSMAUG00000012059Patl19695.370Mesocricetus_auratus
ENSMICG00000004172PATL19896.994ENSMOCG00000010087Patl19992.308Microtus_ochrogaster
ENSMICG00000004172PATL15133.663ENSMOCG00000015367Patl27233.002Microtus_ochrogaster
ENSMICG00000004172PATL19846.273ENSMMOG00000013711patl110043.359Mola_mola
ENSMICG00000004172PATL16333.527ENSMODG00000017690PATL27432.360Monodelphis_domestica
ENSMICG00000004172PATL19889.117ENSMODG00000020201PATL19983.875Monodelphis_domestica
ENSMICG00000004172PATL19138.880ENSMALG00000018706patl19750.000Monopterus_albus
ENSMICG00000004172PATL15931.078ENSMALG00000008131patl25131.961Monopterus_albus
ENSMICG00000004172PATL19896.835MGP_CAROLIEiJ_G0022739Patl19992.308Mus_caroli
ENSMICG00000004172PATL19896.994ENSMUSG00000046139Patl19992.438Mus_musculus
ENSMICG00000004172PATL19896.677MGP_PahariEiJ_G0014233Patl19992.177Mus_pahari
ENSMICG00000004172PATL19897.152MGP_SPRETEiJ_G0023652Patl19992.568Mus_spretus
ENSMICG00000004172PATL19897.788ENSMPUG00000014607PATL19992.708Mustela_putorius_furo
ENSMICG00000004172PATL19894.313ENSMLUG00000011169PATL19989.453Myotis_lucifugus
ENSMICG00000004172PATL19897.327ENSNGAG00000003682Patl19992.607Nannospalax_galili
ENSMICG00000004172PATL16032.083ENSNBRG00000011745patl25832.771Neolamprologus_brichardi
ENSMICG00000004172PATL15966.667ENSNBRG00000015372patl19240.230Neolamprologus_brichardi
ENSMICG00000004172PATL16132.924ENSNLEG00000005673PATL27433.871Nomascus_leucogenys
ENSMICG00000004172PATL19894.620ENSNLEG00000013081PATL110090.719Nomascus_leucogenys
ENSMICG00000004172PATL16290.968ENSMEUG00000009391PATL17490.968Notamacropus_eugenii
ENSMICG00000004172PATL16696.032ENSOPRG00000007963PATL17896.032Ochotona_princeps
ENSMICG00000004172PATL16697.345ENSODEG00000001792PATL19491.608Octodon_degus
ENSMICG00000004172PATL16066.667ENSONIG00000004170patl110045.149Oreochromis_niloticus
ENSMICG00000004172PATL16033.472ENSONIG00000011519patl25334.053Oreochromis_niloticus
ENSMICG00000004172PATL15079.949ENSOANG00000011117-9580.206Ornithorhynchus_anatinus
ENSMICG00000004172PATL19898.259ENSOCUG00000002156PATL19993.351Oryctolagus_cuniculus
ENSMICG00000004172PATL15932.218ENSOCUG00000006339PATL27432.506Oryctolagus_cuniculus
ENSMICG00000004172PATL15931.799ENSORLG00000005780patl26330.357Oryzias_latipes
ENSMICG00000004172PATL16231.076ENSORLG00020016506patl26130.417Oryzias_latipes_hni
ENSMICG00000004172PATL16231.213ENSORLG00015014500patl26330.556Oryzias_latipes_hsok
ENSMICG00000004172PATL18531.317ENSOMEG00000021628patl25633.571Oryzias_melastigma
ENSMICG00000004172PATL19899.367ENSOGAG00000004351PATL19994.915Otolemur_garnettii
ENSMICG00000004172PATL15233.017ENSOGAG00000004709PATL27232.542Otolemur_garnettii
ENSMICG00000004172PATL15932.632ENSOARG00000003762PATL27233.333Ovis_aries
ENSMICG00000004172PATL19796.497ENSOARG00000012005PATL19590.826Ovis_aries
ENSMICG00000004172PATL19899.209ENSPPAG00000034275PATL19994.003Pan_paniscus
ENSMICG00000004172PATL16132.994ENSPPAG00000007221PATL27333.871Pan_paniscus
ENSMICG00000004172PATL16132.099ENSPPRG00000004279PATL27232.771Panthera_pardus
ENSMICG00000004172PATL19796.970ENSPPRG00000020639PATL19992.126Panthera_pardus
ENSMICG00000004172PATL16132.172ENSPTIG00000018964PATL27232.530Panthera_tigris_altaica
ENSMICG00000004172PATL19896.994ENSPTIG00000019298PATL19992.177Panthera_tigris_altaica
ENSMICG00000004172PATL16132.653ENSPTRG00000041536PATL27333.641Pan_troglodytes
ENSMICG00000004172PATL19888.449ENSPTRG00000003697PATL110085.229Pan_troglodytes
ENSMICG00000004172PATL19898.892ENSPANG00000035620PATL19994.003Papio_anubis
ENSMICG00000004172PATL19846.041ENSPKIG00000016224patl19944.840Paramormyrops_kingsleyae
ENSMICG00000004172PATL19884.094ENSPSIG00000016206PATL19578.571Pelodiscus_sinensis
ENSMICG00000004172PATL15233.095ENSPSIG00000017690PATL29532.426Pelodiscus_sinensis
ENSMICG00000004172PATL18658.451ENSPMGG00000002644patl19942.892Periophthalmus_magnuspinnatus
ENSMICG00000004172PATL15733.263ENSPMGG00000014550patl26333.806Periophthalmus_magnuspinnatus
ENSMICG00000004172PATL19897.152ENSPEMG00000014215Patl19992.308Peromyscus_maniculatus_bairdii
ENSMICG00000004172PATL16031.762ENSPEMG00000016509Patl27032.908Peromyscus_maniculatus_bairdii
ENSMICG00000004172PATL19889.590ENSPCIG00000010852PATL19984.135Phascolarctos_cinereus
ENSMICG00000004172PATL15534.136ENSPCIG00000018256PATL27634.074Phascolarctos_cinereus
ENSMICG00000004172PATL19846.198ENSPFOG00000007768patl19944.578Poecilia_formosa
ENSMICG00000004172PATL18532.327ENSPFOG00000007305patl25434.689Poecilia_formosa
ENSMICG00000004172PATL15248.916ENSPLAG00000018465patl17547.248Poecilia_latipinna
ENSMICG00000004172PATL19830.675ENSPLAG00000020713patl25434.689Poecilia_latipinna
ENSMICG00000004172PATL19831.402ENSPMEG00000018942patl25434.689Poecilia_mexicana
ENSMICG00000004172PATL18050.288ENSPMEG00000006555patl17547.095Poecilia_mexicana
ENSMICG00000004172PATL15536.240ENSPREG00000023066patl25131.672Poecilia_reticulata
ENSMICG00000004172PATL18048.752ENSPREG00000003874patl16551.248Poecilia_reticulata
ENSMICG00000004172PATL19899.209ENSPPYG00000003230PATL19994.394Pongo_abelii
ENSMICG00000004172PATL15232.574ENSPCOG00000000295PATL29935.326Propithecus_coquereli
ENSMICG00000004172PATL19898.892ENSPCOG00000020770PATL19994.394Propithecus_coquereli
ENSMICG00000004172PATL18090.541ENSPVAG00000015239PATL19986.064Pteropus_vampyrus
ENSMICG00000004172PATL16031.875ENSPNYG00000017381patl26132.530Pundamilia_nyererei
ENSMICG00000004172PATL17257.071ENSPNYG00000018936patl19646.988Pundamilia_nyererei
ENSMICG00000004172PATL17678.125ENSPNAG00000017907patl18462.295Pygocentrus_nattereri
ENSMICG00000004172PATL16133.333ENSPNAG00000002315patl26432.298Pygocentrus_nattereri
ENSMICG00000004172PATL19897.310ENSRNOG00000021052Patl19992.308Rattus_norvegicus
ENSMICG00000004172PATL19885.907ENSRBIG00000032263PATL19983.416Rhinopithecus_bieti
ENSMICG00000004172PATL19899.051ENSRROG00000032861PATL19994.133Rhinopithecus_roxellana
ENSMICG00000004172PATL19899.051ENSSBOG00000025195PATL19993.872Saimiri_boliviensis_boliviensis
ENSMICG00000004172PATL19890.252ENSSHAG00000004309PATL19984.955Sarcophilus_harrisii
ENSMICG00000004172PATL18533.096ENSSFOG00015000720patl25534.515Scleropages_formosus
ENSMICG00000004172PATL19844.348ENSSFOG00015009614patl19944.093Scleropages_formosus
ENSMICG00000004172PATL19254.321ENSSMAG00000009482patl18154.321Scophthalmus_maximus
ENSMICG00000004172PATL16332.673ENSSMAG00000017262patl26332.767Scophthalmus_maximus
ENSMICG00000004172PATL16033.054ENSSDUG00000022927patl25932.218Seriola_dumerili
ENSMICG00000004172PATL18968.333ENSSDUG00000005362patl17959.722Seriola_dumerili
ENSMICG00000004172PATL18966.667ENSSLDG00000019146patl17958.333Seriola_lalandi_dorsalis
ENSMICG00000004172PATL16632.083ENSSLDG00000017922patl25933.976Seriola_lalandi_dorsalis
ENSMICG00000004172PATL17797.619ENSSARG00000009600PATL17997.619Sorex_araneus
ENSMICG00000004172PATL19882.148ENSSPUG00000009453PATL19976.953Sphenodon_punctatus
ENSMICG00000004172PATL15248.317ENSSPAG00000003187patl19844.114Stegastes_partitus
ENSMICG00000004172PATL15932.489ENSSPAG00000004784patl26232.941Stegastes_partitus
ENSMICG00000004172PATL19898.262ENSSSCG00000013124PATL19992.839Sus_scrofa
ENSMICG00000004172PATL19979.141ENSTGUG00000006222PATL19975.326Taeniopygia_guttata
ENSMICG00000004172PATL15033.415ENSTGUG00000004619-9834.550Taeniopygia_guttata
ENSMICG00000004172PATL19253.165ENSTRUG00000000709patl19942.247Takifugu_rubripes
ENSMICG00000004172PATL15932.700ENSTRUG00000005647patl25733.178Takifugu_rubripes
ENSMICG00000004172PATL18698.374ENSTBEG00000000796PATL18296.270Tupaia_belangeri
ENSMICG00000004172PATL16997.436ENSTTRG00000009389PATL18397.436Tursiops_truncatus
ENSMICG00000004172PATL16132.172ENSUAMG00000018533PATL27132.446Ursus_americanus
ENSMICG00000004172PATL16132.787ENSUMAG00000007738PATL27132.688Ursus_maritimus
ENSMICG00000004172PATL19797.452ENSUMAG00000018634PATL19992.510Ursus_maritimus
ENSMICG00000004172PATL16397.222ENSVPAG00000009224PATL17697.222Vicugna_pacos
ENSMICG00000004172PATL16232.869ENSVVUG00000011576PATL27233.735Vulpes_vulpes
ENSMICG00000004172PATL19897.314ENSVVUG00000016668PATL19991.342Vulpes_vulpes
ENSMICG00000004172PATL15234.450ENSXETG00000014167patl27532.731Xenopus_tropicalis
ENSMICG00000004172PATL17761.404ENSXCOG00000010808patl19861.404Xiphophorus_couchianus
ENSMICG00000004172PATL16065.000ENSXMAG00000013834patl18356.164Xiphophorus_maculatus

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