EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000004361 (Gene tree)
Gene ID: 105869876
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 41422 bases
Position: chr9:49349751-49391172
Accession: 105869876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000003975	POP1	PF06978.11	3.7e-38	1	2
ENSMICP00000003975	POP1	PF06978.11	3.7e-38	2	2
ENSMICP00000040967	POP1	PF06978.11	4.1e-38	1	2
ENSMICP00000040967	POP1	PF06978.11	4.1e-38	2	2
ENSMICP00000003975	POPLD	PF08170.12	1.3e-26	1	1
ENSMICP00000040967	POPLD	PF08170.12	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000004361	POP1-202	5658	XM_012761994	ENSMICP00000003975	1020 (aa)	XP_012617448	UPI000643AD9E
ENSMICT00000069256	POP1-201	5766	-	ENSMICP00000040967	1056 (aa)	-	UPI000C2EA322

Gene Model

Click here to download ENSMICG00000004361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004361	POP1	100	87.695	ENSG00000104356	POP1	100	90.710	Homo_sapiens
ENSMICG00000004361	POP1	100	48.141	ENSAPOG00000008198	pop1	100	48.141	Acanthochromis_polyacanthus
ENSMICG00000004361	POP1	100	80.097	ENSAMEG00000000556	POP1	100	79.806	Ailuropoda_melanoleuca
ENSMICG00000004361	POP1	90	48.195	ENSACIG00000004169	POP1	100	45.638	Amphilophus_citrinellus
ENSMICG00000004361	POP1	100	47.678	ENSAOCG00000010991	pop1	100	47.388	Amphiprion_ocellaris
ENSMICG00000004361	POP1	91	46.729	ENSAPEG00000007607	pop1	96	47.303	Amphiprion_percula
ENSMICG00000004361	POP1	100	46.328	ENSATEG00000024814	POP1	100	46.698	Anabas_testudineus
ENSMICG00000004361	POP1	92	62.986	ENSAPLG00000014418	POP1	100	62.986	Anas_platyrhynchos
ENSMICG00000004361	POP1	99	55.816	ENSACAG00000016083	POP1	100	55.566	Anolis_carolinensis
ENSMICG00000004361	POP1	88	89.820	ENSANAG00000026360	POP1	99	88.922	Aotus_nancymaae
ENSMICG00000004361	POP1	100	47.259	ENSACLG00000010951	pop1	100	47.014	Astatotilapia_calliptera
ENSMICG00000004361	POP1	100	46.090	ENSAMXG00000014483	POP1	100	45.906	Astyanax_mexicanus
ENSMICG00000004361	POP1	100	79.668	ENSBTAG00000012596	POP1	100	79.668	Bos_taurus
ENSMICG00000004361	POP1	100	86.288	ENSCJAG00000015567	POP1	100	85.994	Callithrix_jacchus
ENSMICG00000004361	POP1	100	80.156	ENSCAFG00000000469	POP1	100	80.156	Canis_familiaris
ENSMICG00000004361	POP1	100	81.543	ENSCAFG00020026765	POP1	100	81.543	Canis_lupus_dingo
ENSMICG00000004361	POP1	100	79.688	ENSCHIG00000017066	POP1	100	79.590	Capra_hircus
ENSMICG00000004361	POP1	100	84.863	ENSTSYG00000003097	POP1	100	84.863	Carlito_syrichta
ENSMICG00000004361	POP1	100	77.724	ENSCAPG00000007251	POP1	100	77.724	Cavia_aperea
ENSMICG00000004361	POP1	100	80.743	ENSCPOG00000002901	POP1	100	80.743	Cavia_porcellus
ENSMICG00000004361	POP1	100	85.700	ENSCCAG00000018939	POP1	100	85.700	Cebus_capucinus
ENSMICG00000004361	POP1	100	86.621	ENSCATG00000040916	POP1	100	88.517	Cercocebus_atys
ENSMICG00000004361	POP1	100	81.427	ENSCLAG00000007208	POP1	97	81.427	Chinchilla_lanigera
ENSMICG00000004361	POP1	90	86.985	ENSCSAG00000012340	POP1	99	86.985	Chlorocebus_sabaeus
ENSMICG00000004361	POP1	96	79.816	ENSCHOG00000011432	POP1	100	79.816	Choloepus_hoffmanni
ENSMICG00000004361	POP1	100	64.849	ENSCPBG00000006373	POP1	100	64.563	Chrysemys_picta_bellii
ENSMICG00000004361	POP1	82	38.521	ENSCING00000008323	-	90	36.749	Ciona_intestinalis
ENSMICG00000004361	POP1	100	86.621	ENSCANG00000001647	POP1	100	86.621	Colobus_angolensis_palliatus
ENSMICG00000004361	POP1	100	76.758	ENSCGRG00001017308	Pop1	100	76.758	Cricetulus_griseus_chok1gshd
ENSMICG00000004361	POP1	100	71.387	ENSCGRG00000010824	Pop1	100	71.387	Cricetulus_griseus_crigri
ENSMICG00000004361	POP1	100	45.706	ENSCSEG00000008737	POP1	100	45.905	Cynoglossus_semilaevis
ENSMICG00000004361	POP1	100	47.419	ENSCVAG00000022248	pop1	100	47.278	Cyprinodon_variegatus
ENSMICG00000004361	POP1	100	77.851	ENSDNOG00000019974	POP1	100	77.851	Dasypus_novemcinctus
ENSMICG00000004361	POP1	100	72.754	ENSDORG00000015384	Pop1	100	72.754	Dipodomys_ordii
ENSMICG00000004361	POP1	61	33.228	FBgn0026702	l(1)G0045	71	32.972	Drosophila_melanogaster
ENSMICG00000004361	POP1	89	69.825	ENSETEG00000007839	POP1	88	69.825	Echinops_telfairi
ENSMICG00000004361	POP1	51	42.095	ENSEBUG00000009897	pop1	87	46.560	Eptatretus_burgeri
ENSMICG00000004361	POP1	100	85.156	ENSEASG00005003189	POP1	98	85.156	Equus_asinus_asinus
ENSMICG00000004361	POP1	100	84.766	ENSECAG00000024236	POP1	100	84.766	Equus_caballus
ENSMICG00000004361	POP1	67	75.000	ENSEEUG00000003050	-	70	75.000	Erinaceus_europaeus
ENSMICG00000004361	POP1	100	48.023	ENSELUG00000003526	pop1	100	47.885	Esox_lucius
ENSMICG00000004361	POP1	100	83.691	ENSFCAG00000002168	POP1	100	83.301	Felis_catus
ENSMICG00000004361	POP1	100	59.768	ENSFALG00000005711	POP1	100	59.671	Ficedula_albicollis
ENSMICG00000004361	POP1	100	82.617	ENSFDAG00000017068	POP1	100	82.617	Fukomys_damarensis
ENSMICG00000004361	POP1	100	46.279	ENSFHEG00000019518	pop1	100	46.183	Fundulus_heteroclitus
ENSMICG00000004361	POP1	94	44.939	ENSGMOG00000000659	POP1	98	45.040	Gadus_morhua
ENSMICG00000004361	POP1	100	46.538	ENSGAFG00000019770	POP1	100	46.538	Gambusia_affinis
ENSMICG00000004361	POP1	100	45.671	ENSGACG00000003499	pop1	100	45.671	Gasterosteus_aculeatus
ENSMICG00000004361	POP1	100	63.426	ENSGAGG00000011737	POP1	98	63.733	Gopherus_agassizii
ENSMICG00000004361	POP1	100	87.500	ENSGGOG00000003176	POP1	100	87.500	Gorilla_gorilla
ENSMICG00000004361	POP1	100	47.299	ENSHBUG00000021583	pop1	100	47.114	Haplochromis_burtoni
ENSMICG00000004361	POP1	100	81.738	ENSHGLG00000006029	POP1	100	81.738	Heterocephalus_glaber_female
ENSMICG00000004361	POP1	100	81.738	ENSHGLG00100016879	POP1	100	81.738	Heterocephalus_glaber_male
ENSMICG00000004361	POP1	90	48.837	ENSHCOG00000013888	pop1	96	48.837	Hippocampus_comes
ENSMICG00000004361	POP1	100	44.963	ENSIPUG00000018336	pop1	100	44.869	Ictalurus_punctatus
ENSMICG00000004361	POP1	100	84.066	ENSSTOG00000011455	POP1	97	84.066	Ictidomys_tridecemlineatus
ENSMICG00000004361	POP1	100	78.320	ENSJJAG00000013325	Pop1	100	78.320	Jaculus_jaculus
ENSMICG00000004361	POP1	100	46.316	ENSKMAG00000001346	POP1	100	46.220	Kryptolebias_marmoratus
ENSMICG00000004361	POP1	89	47.793	ENSLBEG00000024457	POP1	95	47.730	Labrus_bergylta
ENSMICG00000004361	POP1	93	56.263	ENSLACG00000012498	POP1	99	56.263	Latimeria_chalumnae
ENSMICG00000004361	POP1	100	51.544	ENSLOCG00000009817	POP1	100	51.731	Lepisosteus_oculatus
ENSMICG00000004361	POP1	100	83.447	ENSLAFG00000010770	POP1	100	83.447	Loxodonta_africana
ENSMICG00000004361	POP1	100	86.621	ENSMFAG00000000347	POP1	100	88.756	Macaca_fascicularis
ENSMICG00000004361	POP1	100	86.133	ENSMNEG00000036870	POP1	100	88.278	Macaca_nemestrina
ENSMICG00000004361	POP1	100	86.621	ENSMLEG00000034986	POP1	100	88.756	Mandrillus_leucophaeus
ENSMICG00000004361	POP1	100	46.610	ENSMAMG00000004040	pop1	100	46.385	Mastacembelus_armatus
ENSMICG00000004361	POP1	100	47.493	ENSMZEG00005025448	pop1	100	47.209	Maylandia_zebra
ENSMICG00000004361	POP1	100	57.576	ENSMGAG00000012167	POP1	100	57.860	Meleagris_gallopavo
ENSMICG00000004361	POP1	100	76.195	ENSMAUG00000017537	Pop1	100	76.195	Mesocricetus_auratus
ENSMICG00000004361	POP1	100	76.344	ENSMOCG00000006356	Pop1	100	76.344	Microtus_ochrogaster
ENSMICG00000004361	POP1	100	43.466	ENSMMOG00000018242	pop1	100	43.756	Mola_mola
ENSMICG00000004361	POP1	100	68.726	ENSMODG00000006561	POP1	100	68.665	Monodelphis_domestica
ENSMICG00000004361	POP1	100	47.996	ENSMALG00000012621	POP1	100	47.710	Monopterus_albus
ENSMICG00000004361	POP1	100	76.540	MGP_CAROLIEiJ_G0019726	Pop1	100	76.540	Mus_caroli
ENSMICG00000004361	POP1	100	76.931	ENSMUSG00000022325	Pop1	100	76.931	Mus_musculus
ENSMICG00000004361	POP1	100	76.931	MGP_PahariEiJ_G0019735	Pop1	100	76.442	Mus_pahari
ENSMICG00000004361	POP1	100	76.442	MGP_SPRETEiJ_G0020622	Pop1	100	76.442	Mus_spretus
ENSMICG00000004361	POP1	100	81.420	ENSMPUG00000015250	POP1	100	81.420	Mustela_putorius_furo
ENSMICG00000004361	POP1	100	76.803	ENSMLUG00000010204	POP1	100	76.901	Myotis_lucifugus
ENSMICG00000004361	POP1	100	82.617	ENSNGAG00000001582	Pop1	100	82.617	Nannospalax_galili
ENSMICG00000004361	POP1	89	47.588	ENSNBRG00000002356	pop1	94	47.775	Neolamprologus_brichardi
ENSMICG00000004361	POP1	100	86.816	ENSNLEG00000002541	POP1	100	86.816	Nomascus_leucogenys
ENSMICG00000004361	POP1	83	74.398	ENSMEUG00000003118	POP1	90	74.398	Notamacropus_eugenii
ENSMICG00000004361	POP1	100	78.495	ENSOPRG00000007667	POP1	100	78.495	Ochotona_princeps
ENSMICG00000004361	POP1	100	79.610	ENSODEG00000003984	POP1	100	79.610	Octodon_degus
ENSMICG00000004361	POP1	100	47.570	ENSONIG00000016445	pop1	100	47.830	Oreochromis_niloticus
ENSMICG00000004361	POP1	60	68.902	ENSOANG00000001278	-	94	64.634	Ornithorhynchus_anatinus
ENSMICG00000004361	POP1	100	81.244	ENSOCUG00000017400	POP1	100	81.244	Oryctolagus_cuniculus
ENSMICG00000004361	POP1	92	48.654	ENSORLG00000002839	pop1	100	46.845	Oryzias_latipes
ENSMICG00000004361	POP1	90	48.144	ENSORLG00020022450	POP1	96	48.629	Oryzias_latipes_hni
ENSMICG00000004361	POP1	100	47.587	ENSORLG00015012746	POP1	100	47.419	Oryzias_latipes_hsok
ENSMICG00000004361	POP1	100	46.660	ENSOMEG00000006915	pop1	99	47.201	Oryzias_melastigma
ENSMICG00000004361	POP1	100	87.683	ENSOGAG00000001466	POP1	100	87.683	Otolemur_garnettii
ENSMICG00000004361	POP1	100	87.695	ENSPPAG00000018410	POP1	100	87.695	Pan_paniscus
ENSMICG00000004361	POP1	100	83.220	ENSPPRG00000005002	POP1	100	82.829	Panthera_pardus
ENSMICG00000004361	POP1	100	83.610	ENSPTIG00000016527	POP1	100	83.220	Panthera_tigris_altaica
ENSMICG00000004361	POP1	100	87.695	ENSPTRG00000020458	POP1	100	89.713	Pan_troglodytes
ENSMICG00000004361	POP1	100	86.426	ENSPANG00000009704	POP1	100	86.426	Papio_anubis
ENSMICG00000004361	POP1	100	50.000	ENSPKIG00000016325	POP1	100	50.000	Paramormyrops_kingsleyae
ENSMICG00000004361	POP1	100	62.415	ENSPSIG00000012343	POP1	100	62.536	Pelodiscus_sinensis
ENSMICG00000004361	POP1	90	48.870	ENSPMGG00000022253	POP1	95	49.573	Periophthalmus_magnuspinnatus
ENSMICG00000004361	POP1	99	75.479	ENSPEMG00000023633	Pop1	100	75.192	Peromyscus_maniculatus_bairdii
ENSMICG00000004361	POP1	90	44.046	ENSPMAG00000003209	POP1	100	44.328	Petromyzon_marinus
ENSMICG00000004361	POP1	100	68.702	ENSPCIG00000012216	POP1	100	68.217	Phascolarctos_cinereus
ENSMICG00000004361	POP1	100	47.278	ENSPFOG00000012490	POP1	100	47.228	Poecilia_formosa
ENSMICG00000004361	POP1	100	47.064	ENSPLAG00000004646	POP1	100	47.064	Poecilia_latipinna
ENSMICG00000004361	POP1	100	47.550	ENSPMEG00000019592	POP1	100	47.550	Poecilia_mexicana
ENSMICG00000004361	POP1	100	46.947	ENSPREG00000020951	POP1	100	47.081	Poecilia_reticulata
ENSMICG00000004361	POP1	100	87.402	ENSPPYG00000018777	POP1	100	87.402	Pongo_abelii
ENSMICG00000004361	POP1	100	75.977	ENSPCAG00000016662	POP1	100	75.586	Procavia_capensis
ENSMICG00000004361	POP1	100	94.902	ENSPCOG00000019420	POP1	100	94.902	Propithecus_coquereli
ENSMICG00000004361	POP1	100	82.732	ENSPVAG00000014468	POP1	100	82.732	Pteropus_vampyrus
ENSMICG00000004361	POP1	89	47.901	ENSPNYG00000004476	pop1	97	47.521	Pundamilia_nyererei
ENSMICG00000004361	POP1	100	45.799	ENSPNAG00000000265	pop1	100	45.429	Pygocentrus_nattereri
ENSMICG00000004361	POP1	100	76.321	ENSRNOG00000005243	Pop1	100	76.027	Rattus_norvegicus
ENSMICG00000004361	POP1	100	86.816	ENSRBIG00000007996	POP1	100	88.785	Rhinopithecus_bieti
ENSMICG00000004361	POP1	100	87.012	ENSRROG00000012334	POP1	100	89.019	Rhinopithecus_roxellana
ENSMICG00000004361	POP1	99	86.166	ENSSBOG00000020830	POP1	100	86.166	Saimiri_boliviensis_boliviensis
ENSMICG00000004361	POP1	100	68.208	ENSSHAG00000000296	POP1	100	67.437	Sarcophilus_harrisii
ENSMICG00000004361	POP1	100	48.848	ENSSFOG00015007429	pop1	99	48.848	Scleropages_formosus
ENSMICG00000004361	POP1	92	45.426	ENSSMAG00000010467	POP1	97	48.290	Scophthalmus_maximus
ENSMICG00000004361	POP1	100	46.429	ENSSDUG00000007817	POP1	100	46.573	Seriola_dumerili
ENSMICG00000004361	POP1	100	46.385	ENSSLDG00000012565	POP1	100	46.435	Seriola_lalandi_dorsalis
ENSMICG00000004361	POP1	100	59.263	ENSSPUG00000003550	-	100	58.801	Sphenodon_punctatus
ENSMICG00000004361	POP1	100	46.109	ENSSPAG00000014955	pop1	94	49.194	Stegastes_partitus
ENSMICG00000004361	POP1	100	80.938	ENSSSCG00000006078	POP1	100	80.938	Sus_scrofa
ENSMICG00000004361	POP1	92	57.278	ENSTGUG00000012011	-	100	57.278	Taeniopygia_guttata
ENSMICG00000004361	POP1	91	47.513	ENSTRUG00000010856	pop1	94	47.513	Takifugu_rubripes
ENSMICG00000004361	POP1	92	48.755	ENSTNIG00000013297	pop1	99	48.861	Tetraodon_nigroviridis
ENSMICG00000004361	POP1	96	80.450	ENSTBEG00000014214	POP1	100	80.450	Tupaia_belangeri
ENSMICG00000004361	POP1	100	81.134	ENSTTRG00000016071	POP1	100	81.134	Tursiops_truncatus
ENSMICG00000004361	POP1	99	77.866	ENSUAMG00000017309	POP1	100	77.866	Ursus_americanus
ENSMICG00000004361	POP1	92	88.259	ENSUMAG00000016952	POP1	100	87.045	Ursus_maritimus
ENSMICG00000004361	POP1	83	87.912	ENSVPAG00000008278	POP1	82	87.912	Vicugna_pacos
ENSMICG00000004361	POP1	100	82.129	ENSVVUG00000010994	POP1	100	82.129	Vulpes_vulpes
ENSMICG00000004361	POP1	100	42.653	ENSXCOG00000017043	POP1	100	42.653	Xiphophorus_couchianus
ENSMICG00000004361	POP1	100	45.998	ENSXMAG00000002472	POP1	100	45.857	Xiphophorus_maculatus