EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000004465 (Gene tree)
Gene ID: 105879468
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 63904 bases
Position: chr21:27922048-27985951
Accession: 105879468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000004082	DRY_EERY	PF09750.9	4e-32	1	1
ENSMICP00000045305	DRY_EERY	PF09750.9	4.3e-32	1	1
ENSMICP00000004082	Surp	PF01805.20	6.6e-27	1	2
ENSMICP00000004082	Surp	PF01805.20	6.6e-27	2	2
ENSMICP00000045305	Surp	PF01805.20	7.6e-27	1	2
ENSMICP00000045305	Surp	PF01805.20	7.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000004477	SFSWAP-201	3431	XM_012779742	ENSMICP00000004082	947 (aa)	XP_012635196	UPI00064358C2
ENSMICT00000065777	SFSWAP-202	3387	XM_012779737	ENSMICP00000045305	999 (aa)	XP_012635191	UPI0006436FBD

Gene Model

Click here to download ENSMICG00000004465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004465	SFSWAP	100	93.487	ENSG00000061936	SFSWAP	100	93.592	Homo_sapiens
ENSMICG00000004465	SFSWAP	70	61.079	ENSAPOG00000005784	sfswap	61	80.952	Acanthochromis_polyacanthus
ENSMICG00000004465	SFSWAP	70	60.380	ENSAOCG00000016469	sfswap	60	68.194	Amphiprion_ocellaris
ENSMICG00000004465	SFSWAP	70	61.618	ENSAPEG00000004965	sfswap	60	68.194	Amphiprion_percula
ENSMICG00000004465	SFSWAP	78	81.818	ENSATEG00000021053	sfswap	75	81.818	Anabas_testudineus
ENSMICG00000004465	SFSWAP	100	93.796	ENSANAG00000001518	SFSWAP	100	92.744	Aotus_nancymaae
ENSMICG00000004465	SFSWAP	100	91.043	ENSBTAG00000000439	SFSWAP	100	91.542	Bos_taurus
ENSMICG00000004465	SFSWAP	100	93.158	ENSCJAG00000003613	SFSWAP	100	92.526	Callithrix_jacchus
ENSMICG00000004465	SFSWAP	100	89.451	ENSCAFG00000006625	SFSWAP	100	85.543	Canis_familiaris
ENSMICG00000004465	SFSWAP	87	81.707	ENSCAFG00020011254	SFSWAP	92	82.136	Canis_lupus_dingo
ENSMICG00000004465	SFSWAP	100	90.727	ENSCHIG00000008838	SFSWAP	100	90.411	Capra_hircus
ENSMICG00000004465	SFSWAP	100	93.007	ENSTSYG00000010303	SFSWAP	100	93.007	Carlito_syrichta
ENSMICG00000004465	SFSWAP	92	89.636	ENSCAPG00000004394	SFSWAP	96	89.977	Cavia_aperea
ENSMICG00000004465	SFSWAP	100	90.316	ENSCPOG00000005280	SFSWAP	100	90.632	Cavia_porcellus
ENSMICG00000004465	SFSWAP	100	93.263	ENSCCAG00000037255	SFSWAP	100	92.842	Cebus_capucinus
ENSMICG00000004465	SFSWAP	100	94.415	ENSCATG00000031094	SFSWAP	100	94.310	Cercocebus_atys
ENSMICG00000004465	SFSWAP	100	92.097	ENSCLAG00000008380	SFSWAP	100	91.992	Chinchilla_lanigera
ENSMICG00000004465	SFSWAP	100	94.415	ENSCSAG00000001884	SFSWAP	100	94.310	Chlorocebus_sabaeus
ENSMICG00000004465	SFSWAP	92	75.654	ENSCHOG00000003578	SFSWAP	93	87.810	Choloepus_hoffmanni
ENSMICG00000004465	SFSWAP	100	94.099	ENSCANG00000036501	SFSWAP	100	93.994	Colobus_angolensis_palliatus
ENSMICG00000004465	SFSWAP	100	89.968	ENSCGRG00001011284	Sfswap	100	88.912	Cricetulus_griseus_chok1gshd
ENSMICG00000004465	SFSWAP	100	89.968	ENSCGRG00000017417	Sfswap	100	88.912	Cricetulus_griseus_crigri
ENSMICG00000004465	SFSWAP	50	80.000	ENSCVAG00000001205	-	53	57.647	Cyprinodon_variegatus
ENSMICG00000004465	SFSWAP	99	56.418	ENSDARG00000005980	sfswap	100	53.749	Danio_rerio
ENSMICG00000004465	SFSWAP	100	89.910	ENSDNOG00000018742	SFSWAP	99	89.610	Dasypus_novemcinctus
ENSMICG00000004465	SFSWAP	90	93.431	ENSDORG00000010352	Sfswap	93	88.957	Dipodomys_ordii
ENSMICG00000004465	SFSWAP	50	45.763	FBgn0003638	su(w[a])	56	54.444	Drosophila_melanogaster
ENSMICG00000004465	SFSWAP	77	89.320	ENSETEG00000016657	-	86	86.408	Echinops_telfairi
ENSMICG00000004465	SFSWAP	84	38.528	ENSEBUG00000016748	SFSWAP	93	43.046	Eptatretus_burgeri
ENSMICG00000004465	SFSWAP	100	90.832	ENSEASG00005016502	SFSWAP	100	90.622	Equus_asinus_asinus
ENSMICG00000004465	SFSWAP	100	90.210	ENSECAG00000007657	SFSWAP	100	90.010	Equus_caballus
ENSMICG00000004465	SFSWAP	86	73.382	ENSEEUG00000001713	SFSWAP	94	75.051	Erinaceus_europaeus
ENSMICG00000004465	SFSWAP	100	53.397	ENSELUG00000010942	sfswap	90	64.819	Esox_lucius
ENSMICG00000004465	SFSWAP	100	90.031	ENSFDAG00000017235	SFSWAP	100	90.031	Fukomys_damarensis
ENSMICG00000004465	SFSWAP	99	51.527	ENSGAFG00000006272	sfswap	89	67.480	Gambusia_affinis
ENSMICG00000004465	SFSWAP	77	72.549	ENSGACG00000017647	sfswap	92	64.879	Gasterosteus_aculeatus
ENSMICG00000004465	SFSWAP	100	93.908	ENSGGOG00000014877	SFSWAP	100	94.013	Gorilla_gorilla
ENSMICG00000004465	SFSWAP	100	91.570	ENSHGLG00000019216	SFSWAP	100	91.465	Heterocephalus_glaber_female
ENSMICG00000004465	SFSWAP	100	91.149	ENSHGLG00100019350	SFSWAP	100	91.043	Heterocephalus_glaber_male
ENSMICG00000004465	SFSWAP	98	55.736	ENSIPUG00000010598	sfswap	59	69.531	Ictalurus_punctatus
ENSMICG00000004465	SFSWAP	100	89.252	ENSJJAG00000006609	Sfswap	100	89.146	Jaculus_jaculus
ENSMICG00000004465	SFSWAP	81	58.055	ENSKMAG00000013168	sfswap	74	66.667	Kryptolebias_marmoratus
ENSMICG00000004465	SFSWAP	70	59.012	ENSLBEG00000010239	sfswap	71	60.383	Labrus_bergylta
ENSMICG00000004465	SFSWAP	92	69.697	ENSLOCG00000006202	sfswap	99	60.338	Lepisosteus_oculatus
ENSMICG00000004465	SFSWAP	100	93.407	ENSMFAG00000037352	SFSWAP	100	93.307	Macaca_fascicularis
ENSMICG00000004465	SFSWAP	100	94.310	ENSMMUG00000020343	SFSWAP	100	94.204	Macaca_mulatta
ENSMICG00000004465	SFSWAP	100	94.310	ENSMNEG00000041002	SFSWAP	100	94.204	Macaca_nemestrina
ENSMICG00000004465	SFSWAP	100	92.202	ENSMLEG00000035728	SFSWAP	100	91.992	Mandrillus_leucophaeus
ENSMICG00000004465	SFSWAP	100	89.124	ENSMOCG00000014390	Sfswap	100	88.068	Microtus_ochrogaster
ENSMICG00000004465	SFSWAP	100	89.546	MGP_CAROLIEiJ_G0027780	Sfswap	100	88.596	Mus_caroli
ENSMICG00000004465	SFSWAP	100	89.229	ENSMUSG00000029439	Sfswap	100	88.279	Mus_musculus
ENSMICG00000004465	SFSWAP	100	88.947	MGP_PahariEiJ_G0024360	Sfswap	100	87.789	Mus_pahari
ENSMICG00000004465	SFSWAP	100	89.229	MGP_SPRETEiJ_G0028779	Sfswap	100	88.279	Mus_spretus
ENSMICG00000004465	SFSWAP	90	83.204	ENSMLUG00000011296	SFSWAP	100	83.426	Myotis_lucifugus
ENSMICG00000004465	SFSWAP	100	91.693	ENSNLEG00000008386	SFSWAP	100	90.747	Nomascus_leucogenys
ENSMICG00000004465	SFSWAP	71	89.170	ENSMEUG00000009556	-	79	88.448	Notamacropus_eugenii
ENSMICG00000004465	SFSWAP	100	74.685	ENSOPRG00000006983	-	82	86.667	Ochotona_princeps
ENSMICG00000004465	SFSWAP	100	91.149	ENSODEG00000008020	SFSWAP	100	91.043	Octodon_degus
ENSMICG00000004465	SFSWAP	96	54.629	ENSONIG00000003757	sfswap	52	67.297	Oreochromis_niloticus
ENSMICG00000004465	SFSWAP	51	80.816	ENSOANG00000013861	SFSWAP	100	84.414	Ornithorhynchus_anatinus
ENSMICG00000004465	SFSWAP	100	86.894	ENSOCUG00000002165	SFSWAP	100	85.036	Oryctolagus_cuniculus
ENSMICG00000004465	SFSWAP	80	59.475	ENSORLG00000010983	sfswap	53	67.486	Oryzias_latipes
ENSMICG00000004465	SFSWAP	80	59.534	ENSORLG00020010779	sfswap	53	67.486	Oryzias_latipes_hni
ENSMICG00000004465	SFSWAP	83	57.975	ENSORLG00015023093	sfswap	56	63.317	Oryzias_latipes_hsok
ENSMICG00000004465	SFSWAP	78	60.735	ENSOMEG00000022065	sfswap	54	68.649	Oryzias_melastigma
ENSMICG00000004465	SFSWAP	89	95.165	ENSOGAG00000016724	SFSWAP	99	94.811	Otolemur_garnettii
ENSMICG00000004465	SFSWAP	100	90.326	ENSOARG00000014314	SFSWAP	100	90.011	Ovis_aries
ENSMICG00000004465	SFSWAP	100	93.803	ENSPPAG00000036706	SFSWAP	100	93.908	Pan_paniscus
ENSMICG00000004465	SFSWAP	99	77.433	ENSPTIG00000004304	SFSWAP	97	89.474	Panthera_tigris_altaica
ENSMICG00000004465	SFSWAP	100	93.803	ENSPTRG00000005640	SFSWAP	100	94.013	Pan_troglodytes
ENSMICG00000004465	SFSWAP	100	94.415	ENSPANG00000019737	SFSWAP	100	94.310	Papio_anubis
ENSMICG00000004465	SFSWAP	63	74.961	ENSPSIG00000017807	SFSWAP	86	76.727	Pelodiscus_sinensis
ENSMICG00000004465	SFSWAP	100	89.346	ENSPEMG00000001237	Sfswap	100	88.291	Peromyscus_maniculatus_bairdii
ENSMICG00000004465	SFSWAP	99	51.324	ENSPFOG00000019657	sfswap	66	63.591	Poecilia_formosa
ENSMICG00000004465	SFSWAP	99	51.426	ENSPLAG00000008513	sfswap	66	63.591	Poecilia_latipinna
ENSMICG00000004465	SFSWAP	99	51.429	ENSPMEG00000008716	sfswap	90	65.396	Poecilia_mexicana
ENSMICG00000004465	SFSWAP	87	56.653	ENSPREG00000006692	sfswap	90	64.620	Poecilia_reticulata
ENSMICG00000004465	SFSWAP	98	93.576	ENSPPYG00000005129	SFSWAP	100	93.576	Pongo_abelii
ENSMICG00000004465	SFSWAP	58	86.822	ENSPCAG00000004977	-	52	88.148	Procavia_capensis
ENSMICG00000004465	SFSWAP	100	98.102	ENSPCOG00000023786	SFSWAP	100	98.102	Propithecus_coquereli
ENSMICG00000004465	SFSWAP	92	87.282	ENSPVAG00000014918	SFSWAP	92	86.237	Pteropus_vampyrus
ENSMICG00000004465	SFSWAP	72	57.703	ENSPNYG00000012660	sfswap	52	66.307	Pundamilia_nyererei
ENSMICG00000004465	SFSWAP	76	57.867	ENSPNAG00000007073	sfswap	50	46.957	Pygocentrus_nattereri
ENSMICG00000004465	SFSWAP	100	88.288	ENSRNOG00000000931	Sfswap	100	87.487	Rattus_norvegicus
ENSMICG00000004465	SFSWAP	93	96.350	ENSRBIG00000036330	SFSWAP	100	87.987	Rhinopithecus_bieti
ENSMICG00000004465	SFSWAP	100	93.994	ENSRROG00000032001	SFSWAP	100	93.888	Rhinopithecus_roxellana
ENSMICG00000004465	SFSWAP	100	92.632	ENSSBOG00000026217	SFSWAP	100	92.333	Saimiri_boliviensis_boliviensis
ENSMICG00000004465	SFSWAP	92	83.747	ENSSHAG00000014232	SFSWAP	56	82.897	Sarcophilus_harrisii
ENSMICG00000004465	SFSWAP	71	60.256	ENSSLDG00000010835	sfswap	74	66.142	Seriola_lalandi_dorsalis
ENSMICG00000004465	SFSWAP	78	87.051	ENSSARG00000000424	SFSWAP	85	87.051	Sorex_araneus
ENSMICG00000004465	SFSWAP	87	74.820	ENSSPUG00000010272	SFSWAP	85	73.735	Sphenodon_punctatus
ENSMICG00000004465	SFSWAP	100	90.536	ENSSSCG00000009744	SFSWAP	100	90.011	Sus_scrofa
ENSMICG00000004465	SFSWAP	54	90.909	ENSTBEG00000004983	-	67	90.909	Tupaia_belangeri
ENSMICG00000004465	SFSWAP	100	80.882	ENSTTRG00000013478	SFSWAP	93	94.019	Tursiops_truncatus
ENSMICG00000004465	SFSWAP	88	84.940	ENSUMAG00000002957	SFSWAP	91	87.961	Ursus_maritimus
ENSMICG00000004465	SFSWAP	50	93.023	ENSVPAG00000010479	-	51	95.918	Vicugna_pacos
ENSMICG00000004465	SFSWAP	84	58.597	ENSXMAG00000009020	sfswap	89	67.209	Xiphophorus_maculatus