EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000004535 (Gene tree)
Gene ID: 105881573
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 33212 bases
Position: chr12:7988442-8021653
Accession: 105881573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000023765	MRP-S27	PF10037.9	7.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000033899	PTCD2-201	1537	XM_012783279	ENSMICP00000023765	387 (aa)	XP_012638733	UPI000C2EA773
ENSMICT00000004541	PTCD2-202	648	-	ENSMICP00000004143	215 (aa)	-	UPI00085B1FE4

Gene Model

Click here to download ENSMICG00000004535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000004535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000004535	PTCD2	99	81.137	ENSG00000049883	PTCD2	100	81.818	Homo_sapiens
ENSMICG00000004535	PTCD2	90	47.126	ENSAPOG00000020682	ptcd2	91	47.126	Acanthochromis_polyacanthus
ENSMICG00000004535	PTCD2	99	78.553	ENSAMEG00000007194	PTCD2	99	78.553	Ailuropoda_melanoleuca
ENSMICG00000004535	PTCD2	89	42.120	ENSACIG00000002053	ptcd2	100	42.120	Amphilophus_citrinellus
ENSMICG00000004535	PTCD2	98	44.855	ENSAOCG00000006616	ptcd2	95	44.855	Amphiprion_ocellaris
ENSMICG00000004535	PTCD2	90	46.552	ENSAPEG00000022926	ptcd2	89	46.552	Amphiprion_percula
ENSMICG00000004535	PTCD2	97	54.787	ENSACAG00000009747	PTCD2	96	54.787	Anolis_carolinensis
ENSMICG00000004535	PTCD2	99	81.137	ENSANAG00000029353	PTCD2	99	81.137	Aotus_nancymaae
ENSMICG00000004535	PTCD2	98	43.272	ENSACLG00000027742	ptcd2	95	43.272	Astatotilapia_calliptera
ENSMICG00000004535	PTCD2	89	43.478	ENSAMXG00000029404	ptcd2	91	43.478	Astyanax_mexicanus
ENSMICG00000004535	PTCD2	99	79.427	ENSBTAG00000014675	PTCD2	100	79.427	Bos_taurus
ENSMICG00000004535	PTCD2	99	80.879	ENSCJAG00000016364	PTCD2	99	80.879	Callithrix_jacchus
ENSMICG00000004535	PTCD2	99	78.238	ENSCAFG00000007982	PTCD2	91	78.238	Canis_familiaris
ENSMICG00000004535	PTCD2	89	80.636	ENSCAFG00020019147	PTCD2	97	80.636	Canis_lupus_dingo
ENSMICG00000004535	PTCD2	99	80.469	ENSCHIG00000017118	PTCD2	100	80.469	Capra_hircus
ENSMICG00000004535	PTCD2	99	73.890	ENSCPOG00000040168	PTCD2	100	73.890	Cavia_porcellus
ENSMICG00000004535	PTCD2	99	80.362	ENSCCAG00000029389	-	99	80.362	Cebus_capucinus
ENSMICG00000004535	PTCD2	85	73.030	ENSCCAG00000021996	-	98	73.981	Cebus_capucinus
ENSMICG00000004535	PTCD2	99	80.679	ENSCATG00000019069	PTCD2	100	80.679	Cercocebus_atys
ENSMICG00000004535	PTCD2	99	73.368	ENSCLAG00000000072	PTCD2	100	73.368	Chinchilla_lanigera
ENSMICG00000004535	PTCD2	99	80.679	ENSCSAG00000015623	PTCD2	100	80.679	Chlorocebus_sabaeus
ENSMICG00000004535	PTCD2	73	75.294	ENSCHOG00000010634	PTCD2	82	75.294	Choloepus_hoffmanni
ENSMICG00000004535	PTCD2	98	53.927	ENSCPBG00000000216	PTCD2	98	53.927	Chrysemys_picta_bellii
ENSMICG00000004535	PTCD2	99	79.587	ENSCANG00000035636	PTCD2	99	79.587	Colobus_angolensis_palliatus
ENSMICG00000004535	PTCD2	99	73.438	ENSCGRG00001015289	Ptcd2	84	73.438	Cricetulus_griseus_chok1gshd
ENSMICG00000004535	PTCD2	99	73.438	ENSCGRG00000006193	Ptcd2	84	73.438	Cricetulus_griseus_crigri
ENSMICG00000004535	PTCD2	90	45.402	ENSCVAG00000001285	ptcd2	89	45.402	Cyprinodon_variegatus
ENSMICG00000004535	PTCD2	93	43.213	ENSDARG00000035391	ptcd2	94	43.213	Danio_rerio
ENSMICG00000004535	PTCD2	99	78.068	ENSDNOG00000008719	PTCD2	100	78.068	Dasypus_novemcinctus
ENSMICG00000004535	PTCD2	99	78.295	ENSDORG00000004921	Ptcd2	100	78.295	Dipodomys_ordii
ENSMICG00000004535	PTCD2	99	69.091	ENSETEG00000016542	PTCD2	99	69.091	Echinops_telfairi
ENSMICG00000004535	PTCD2	99	78.590	ENSEASG00005018038	PTCD2	100	78.590	Equus_asinus_asinus
ENSMICG00000004535	PTCD2	99	78.385	ENSECAG00000007022	PTCD2	99	78.385	Equus_caballus
ENSMICG00000004535	PTCD2	99	72.063	ENSEEUG00000014031	PTCD2	99	72.063	Erinaceus_europaeus
ENSMICG00000004535	PTCD2	93	47.778	ENSELUG00000003584	ptcd2	94	47.778	Esox_lucius
ENSMICG00000004535	PTCD2	99	73.698	ENSFCAG00000045432	PTCD2	83	73.698	Felis_catus
ENSMICG00000004535	PTCD2	84	52.599	ENSFALG00000010299	PTCD2	99	52.599	Ficedula_albicollis
ENSMICG00000004535	PTCD2	99	75.196	ENSFDAG00000018461	PTCD2	100	75.196	Fukomys_damarensis
ENSMICG00000004535	PTCD2	90	48.580	ENSGMOG00000003637	ptcd2	91	48.580	Gadus_morhua
ENSMICG00000004535	PTCD2	91	50.000	ENSGALG00000038260	PTCD2	93	50.000	Gallus_gallus
ENSMICG00000004535	PTCD2	98	56.806	ENSGAGG00000021952	PTCD2	98	56.806	Gopherus_agassizii
ENSMICG00000004535	PTCD2	99	81.395	ENSGGOG00000010695	PTCD2	99	81.395	Gorilla_gorilla
ENSMICG00000004535	PTCD2	98	43.272	ENSHBUG00000009191	ptcd2	95	43.272	Haplochromis_burtoni
ENSMICG00000004535	PTCD2	99	74.413	ENSHGLG00000001234	PTCD2	100	74.413	Heterocephalus_glaber_female
ENSMICG00000004535	PTCD2	99	74.151	ENSHGLG00100015419	PTCD2	100	74.151	Heterocephalus_glaber_male
ENSMICG00000004535	PTCD2	93	46.154	ENSHCOG00000001703	ptcd2	92	46.154	Hippocampus_comes
ENSMICG00000004535	PTCD2	85	44.817	ENSIPUG00000006080	ptcd2	91	44.286	Ictalurus_punctatus
ENSMICG00000004535	PTCD2	98	80.105	ENSSTOG00000006596	PTCD2	99	80.105	Ictidomys_tridecemlineatus
ENSMICG00000004535	PTCD2	99	75.979	ENSJJAG00000024388	Ptcd2	100	75.979	Jaculus_jaculus
ENSMICG00000004535	PTCD2	92	42.737	ENSKMAG00000009329	ptcd2	94	42.737	Kryptolebias_marmoratus
ENSMICG00000004535	PTCD2	97	45.358	ENSLBEG00000024871	ptcd2	94	45.358	Labrus_bergylta
ENSMICG00000004535	PTCD2	97	50.798	ENSLOCG00000011122	ptcd2	97	50.798	Lepisosteus_oculatus
ENSMICG00000004535	PTCD2	80	79.421	ENSLAFG00000004115	PTCD2	100	79.421	Loxodonta_africana
ENSMICG00000004535	PTCD2	99	79.845	ENSMFAG00000031516	PTCD2	99	79.845	Macaca_fascicularis
ENSMICG00000004535	PTCD2	99	80.157	ENSMNEG00000007537	PTCD2	100	80.157	Macaca_nemestrina
ENSMICG00000004535	PTCD2	99	80.362	ENSMLEG00000031093	PTCD2	99	80.362	Mandrillus_leucophaeus
ENSMICG00000004535	PTCD2	94	48.087	ENSMAMG00000018529	ptcd2	94	48.087	Mastacembelus_armatus
ENSMICG00000004535	PTCD2	98	43.272	ENSMZEG00005003625	ptcd2	95	43.272	Maylandia_zebra
ENSMICG00000004535	PTCD2	90	50.575	ENSMGAG00000005033	PTCD2	100	50.575	Meleagris_gallopavo
ENSMICG00000004535	PTCD2	99	59.008	ENSMAUG00000020253	Ptcd2	100	59.008	Mesocricetus_auratus
ENSMICG00000004535	PTCD2	99	74.935	ENSMOCG00000019985	Ptcd2	100	74.935	Microtus_ochrogaster
ENSMICG00000004535	PTCD2	97	59.043	ENSMODG00000001695	PTCD2	95	59.043	Monodelphis_domestica
ENSMICG00000004535	PTCD2	90	48.138	ENSMALG00000022372	ptcd2	91	48.138	Monopterus_albus
ENSMICG00000004535	PTCD2	99	72.846	MGP_CAROLIEiJ_G0018829	Ptcd2	100	72.846	Mus_caroli
ENSMICG00000004535	PTCD2	99	72.063	ENSMUSG00000021650	Ptcd2	100	72.063	Mus_musculus
ENSMICG00000004535	PTCD2	99	75.196	MGP_PahariEiJ_G0015904	Ptcd2	100	75.196	Mus_pahari
ENSMICG00000004535	PTCD2	99	72.846	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.846	Mus_spretus
ENSMICG00000004535	PTCD2	99	79.896	ENSMPUG00000014401	PTCD2	100	79.896	Mustela_putorius_furo
ENSMICG00000004535	PTCD2	99	77.865	ENSMLUG00000007374	PTCD2	99	77.865	Myotis_lucifugus
ENSMICG00000004535	PTCD2	99	73.890	ENSNGAG00000005027	Ptcd2	100	73.890	Nannospalax_galili
ENSMICG00000004535	PTCD2	85	44.848	ENSNBRG00000000092	-	100	44.848	Neolamprologus_brichardi
ENSMICG00000004535	PTCD2	98	43.536	ENSNBRG00000008174	ptcd2	96	43.536	Neolamprologus_brichardi
ENSMICG00000004535	PTCD2	99	80.362	ENSNLEG00000004516	PTCD2	99	80.362	Nomascus_leucogenys
ENSMICG00000004535	PTCD2	81	53.355	ENSMEUG00000014012	-	82	53.355	Notamacropus_eugenii
ENSMICG00000004535	PTCD2	99	74.151	ENSOPRG00000007290	PTCD2	99	74.151	Ochotona_princeps
ENSMICG00000004535	PTCD2	99	74.740	ENSODEG00000016417	PTCD2	100	74.740	Octodon_degus
ENSMICG00000004535	PTCD2	83	44.375	ENSONIG00000011269	ptcd2	91	44.375	Oreochromis_niloticus
ENSMICG00000004535	PTCD2	94	79.452	ENSOCUG00000007970	PTCD2	100	78.068	Oryctolagus_cuniculus
ENSMICG00000004535	PTCD2	94	44.932	ENSORLG00000003851	ptcd2	92	44.932	Oryzias_latipes
ENSMICG00000004535	PTCD2	94	44.110	ENSORLG00020009823	ptcd2	94	44.110	Oryzias_latipes_hni
ENSMICG00000004535	PTCD2	90	44.729	ENSORLG00015016777	ptcd2	99	44.729	Oryzias_latipes_hsok
ENSMICG00000004535	PTCD2	93	42.147	ENSOMEG00000012396	ptcd2	92	42.147	Oryzias_melastigma
ENSMICG00000004535	PTCD2	100	81.701	ENSOGAG00000008390	PTCD2	100	81.701	Otolemur_garnettii
ENSMICG00000004535	PTCD2	99	80.260	ENSOARG00000005087	PTCD2	99	80.260	Ovis_aries
ENSMICG00000004535	PTCD2	99	81.137	ENSPPAG00000028480	PTCD2	99	81.137	Pan_paniscus
ENSMICG00000004535	PTCD2	99	81.137	ENSPTRG00000016968	PTCD2	99	81.137	Pan_troglodytes
ENSMICG00000004535	PTCD2	89	82.319	ENSPANG00000006611	PTCD2	89	82.319	Papio_anubis
ENSMICG00000004535	PTCD2	91	47.753	ENSPKIG00000019896	ptcd2	93	47.753	Paramormyrops_kingsleyae
ENSMICG00000004535	PTCD2	82	59.306	ENSPSIG00000014559	PTCD2	98	59.306	Pelodiscus_sinensis
ENSMICG00000004535	PTCD2	99	75.844	ENSPEMG00000000884	Ptcd2	100	75.844	Peromyscus_maniculatus_bairdii
ENSMICG00000004535	PTCD2	99	61.719	ENSPCIG00000029047	PTCD2	100	61.719	Phascolarctos_cinereus
ENSMICG00000004535	PTCD2	83	45.963	ENSPLAG00000010456	ptcd2	91	45.115	Poecilia_latipinna
ENSMICG00000004535	PTCD2	90	45.245	ENSPREG00000021797	ptcd2	88	45.245	Poecilia_reticulata
ENSMICG00000004535	PTCD2	100	71.392	ENSPPYG00000015543	PTCD2	100	71.392	Pongo_abelii
ENSMICG00000004535	PTCD2	80	65.806	ENSPCAG00000006806	PTCD2	99	65.806	Procavia_capensis
ENSMICG00000004535	PTCD2	99	78.385	ENSPVAG00000010935	PTCD2	99	78.385	Pteropus_vampyrus
ENSMICG00000004535	PTCD2	98	43.272	ENSPNYG00000003122	ptcd2	95	43.272	Pundamilia_nyererei
ENSMICG00000004535	PTCD2	93	45.028	ENSPNAG00000021490	ptcd2	94	45.304	Pygocentrus_nattereri
ENSMICG00000004535	PTCD2	99	74.935	ENSRNOG00000028403	Ptcd2	100	74.935	Rattus_norvegicus
ENSMICG00000004535	PTCD2	99	74.935	ENSRBIG00000032929	PTCD2	99	74.935	Rhinopithecus_bieti
ENSMICG00000004535	PTCD2	99	80.157	ENSRROG00000000080	PTCD2	100	80.157	Rhinopithecus_roxellana
ENSMICG00000004535	PTCD2	99	80.157	ENSSBOG00000018911	PTCD2	100	80.157	Saimiri_boliviensis_boliviensis
ENSMICG00000004535	PTCD2	99	59.432	ENSSHAG00000003833	PTCD2	100	59.432	Sarcophilus_harrisii
ENSMICG00000004535	PTCD2	93	46.389	ENSSFOG00015015415	ptcd2	93	46.389	Scleropages_formosus
ENSMICG00000004535	PTCD2	98	44.737	ENSSMAG00000010350	ptcd2	97	44.737	Scophthalmus_maximus
ENSMICG00000004535	PTCD2	90	47.564	ENSSDUG00000008142	ptcd2	87	47.564	Seriola_dumerili
ENSMICG00000004535	PTCD2	90	47.564	ENSSLDG00000015284	ptcd2	91	47.564	Seriola_lalandi_dorsalis
ENSMICG00000004535	PTCD2	80	69.677	ENSSARG00000004983	PTCD2	99	69.677	Sorex_araneus
ENSMICG00000004535	PTCD2	89	54.651	ENSSPUG00000000176	PTCD2	87	54.651	Sphenodon_punctatus
ENSMICG00000004535	PTCD2	90	47.701	ENSSPAG00000008591	ptcd2	89	47.701	Stegastes_partitus
ENSMICG00000004535	PTCD2	99	80.729	ENSSSCG00000016975	PTCD2	90	80.729	Sus_scrofa
ENSMICG00000004535	PTCD2	89	52.464	ENSTGUG00000005705	PTCD2	99	52.464	Taeniopygia_guttata
ENSMICG00000004535	PTCD2	100	76.289	ENSTBEG00000016559	PTCD2	100	76.289	Tupaia_belangeri
ENSMICG00000004535	PTCD2	100	78.663	ENSTTRG00000011851	PTCD2	100	78.663	Tursiops_truncatus
ENSMICG00000004535	PTCD2	99	78.295	ENSUAMG00000007583	PTCD2	91	78.295	Ursus_americanus
ENSMICG00000004535	PTCD2	99	78.329	ENSUMAG00000007666	PTCD2	100	78.329	Ursus_maritimus
ENSMICG00000004535	PTCD2	99	80.000	ENSVPAG00000009597	PTCD2	99	80.000	Vicugna_pacos
ENSMICG00000004535	PTCD2	99	78.329	ENSVVUG00000007299	-	100	78.329	Vulpes_vulpes
ENSMICG00000004535	PTCD2	93	50.833	ENSXETG00000031652	PTCD2	94	50.833	Xenopus_tropicalis
ENSMICG00000004535	PTCD2	83	45.652	ENSXMAG00000005940	ptcd2	82	44.540	Xiphophorus_maculatus